RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 GPR142Q7Z601 462 aa21.24■□□□□ 0.99
SNRPA1-202ENST00000394082 CLASRPQ8N2M8 674 aaKnown RBP21.24■□□□□ 0.99
SNRPA1-202ENST00000394082 PANK1Q8TE04 598 aa21.24■□□□□ 0.99
SNRPA1-202ENST00000394082 KIF1BPQ96EK5 621 aa21.24■□□□□ 0.99
SNRPA1-202ENST00000394082 DDX60LQ5H9U9 1706 aaKnown RBP21.24■□□□□ 0.99
SNRPA1-202ENST00000394082 RGS2P41220 211 aa21.23■□□□□ 0.99
SNRPA1-202ENST00000394082 MNX1P50219 401 aaPredicted RBP21.23■□□□□ 0.99
SNRPA1-202ENST00000394082 CCNA1P78396 465 aa21.23■□□□□ 0.99
SNRPA1-202ENST00000394082 GABPAQ06546 454 aa21.23■□□□□ 0.99
SNRPA1-202ENST00000394082 TRIM32Q13049 653 aa21.23■□□□□ 0.99
SNRPA1-202ENST00000394082 CATSPERGQ6ZRH7 1159 aa21.23■□□□□ 0.99
SNRPA1-202ENST00000394082 PLEKHH3Q7Z736 793 aa21.23■□□□□ 0.99
SNRPA1-202ENST00000394082 CCAR1Q8IX12 1150 aaKnown RBP21.23■□□□□ 0.99
SNRPA1-202ENST00000394082 FEZ1Q99689 392 aa21.23■□□□□ 0.99
SNRPA1-202ENST00000394082 PORCNQ9H237 461 aa21.23■□□□□ 0.99
SNRPA1-202ENST00000394082 CABP5Q9NP86 173 aa21.23■□□□□ 0.99
SNRPA1-202ENST00000394082 NDUFB9Q9Y6M9 179 aa21.23■□□□□ 0.99
SNRPA1-202ENST00000394082 LAMA3Q16787 3333 aa21.22■□□□□ 0.99
SNRPA1-202ENST00000394082 MAGEB6P1A0A0J9YX57 407 aa21.22■□□□□ 0.99
SNRPA1-202ENST00000394082 HMMRO75330 724 aa21.22■□□□□ 0.99
SNRPA1-202ENST00000394082 GLRX3O76003 335 aaKnown RBP21.22■□□□□ 0.99
SNRPA1-202ENST00000394082 PRKAR2AP13861 404 aaKnown RBP21.22■□□□□ 0.99
SNRPA1-202ENST00000394082 SHMT1P34896 483 aa21.22■□□□□ 0.99
SNRPA1-202ENST00000394082 PLCD1P51178 756 aa21.22■□□□□ 0.99
SNRPA1-202ENST00000394082 SLC9C2Q5TAH2 1124 aa21.22■□□□□ 0.99
SNRPA1-202ENST00000394082 DIS3LQ8TF46 1054 aaKnown RBP21.22■□□□□ 0.99
SNRPA1-202ENST00000394082 APBA2Q99767 749 aa21.22■□□□□ 0.99
SNRPA1-202ENST00000394082 CRNKL1Q9BZJ0 848 aaKnown RBP21.22■□□□□ 0.99
SNRPA1-202ENST00000394082 PDE6AP16499 860 aa21.21■□□□□ 0.99
SNRPA1-202ENST00000394082 ZKSCAN1P17029 563 aaPredicted RBP21.21■□□□□ 0.99
SNRPA1-202ENST00000394082 VCAM1P19320 739 aa21.21■□□□□ 0.99
SNRPA1-202ENST00000394082 BMP8BP34820 402 aa21.21■□□□□ 0.99
SNRPA1-202ENST00000394082 RAB3GAP1Q15042 981 aa21.21■□□□□ 0.99
SNRPA1-202ENST00000394082 CHMP4BQ9H444 224 aaKnown RBP21.21■□□□□ 0.99
SNRPA1-202ENST00000394082 IL1RAPL2Q9NP60 686 aa21.21■□□□□ 0.99
SNRPA1-202ENST00000394082 DDX19BQ9UMR2 479 aa21.21■□□□□ 0.99
SNRPA1-202ENST00000394082 ALPK3Q96L96 1907 aa21.2■□□□□ 0.98
SNRPA1-202ENST00000394082 PEX10O60683 326 aa21.2■□□□□ 0.98
SNRPA1-202ENST00000394082 RAB11FIP3O75154 756 aa21.2■□□□□ 0.98
SNRPA1-202ENST00000394082 POLR3DP05423 398 aaPredicted RBP21.2■□□□□ 0.98
SNRPA1-202ENST00000394082 PAGR1Q9BTK6 254 aa21.2■□□□□ 0.98
SNRPA1-202ENST00000394082 C11orf49Q9H6J7 331 aa21.2■□□□□ 0.98
SNRPA1-202ENST00000394082 ZBTB40Q9NUA8 1239 aa21.2■□□□□ 0.98
SNRPA1-202ENST00000394082 TCRBV5S4A2TA0A5A2 114 aa21.19■□□□□ 0.98
SNRPA1-202ENST00000394082 CNMDO75829 334 aa21.19■□□□□ 0.98
SNRPA1-202ENST00000394082 GUCY1A2P33402 732 aa21.19■□□□□ 0.98
SNRPA1-202ENST00000394082 CACNB2Q08289 660 aaPredicted RBP21.19■□□□□ 0.98
SNRPA1-202ENST00000394082 MAP2K5Q13163 448 aa21.19■□□□□ 0.98
SNRPA1-202ENST00000394082 DIEXFQ68CQ4 756 aaKnown RBP21.19■□□□□ 0.98
SNRPA1-202ENST00000394082 ACER1Q8TDN7 264 aa21.19■□□□□ 0.98
SNRPA1-202ENST00000394082 SLC15A5A6NIM6 579 aa21.18■□□□□ 0.98
SNRPA1-202ENST00000394082 HOXC6P09630 235 aa21.18■□□□□ 0.98
SNRPA1-202ENST00000394082 IFIT2P09913 472 aaKnown RBP21.18■□□□□ 0.98
SNRPA1-202ENST00000394082 GDF15Q99988 308 aa21.18■□□□□ 0.98
SNRPA1-202ENST00000394082 MCM9Q9NXL9 1143 aa21.18■□□□□ 0.98
SNRPA1-202ENST00000394082 NAV1Q8NEY1 1877 aa21.18■□□□□ 0.98
SNRPA1-202ENST00000394082 COL6A1P12109 1028 aa21.17■□□□□ 0.98
SNRPA1-202ENST00000394082 ZYXQ15942 572 aaKnown RBP21.17■□□□□ 0.98
SNRPA1-202ENST00000394082 LHX8Q68G74 356 aa21.17■□□□□ 0.98
SNRPA1-202ENST00000394082 SIRT2Q8IXJ6 389 aa21.17■□□□□ 0.98
SNRPA1-202ENST00000394082 EDC3Q96F86 508 aaKnown RBP21.17■□□□□ 0.98
SNRPA1-202ENST00000394082 DCP1AQ9NPI6 582 aaPredicted RBP21.17■□□□□ 0.98
SNRPA1-202ENST00000394082 SWAP70Q9UH65 585 aa21.17■□□□□ 0.98
SNRPA1-202ENST00000394082 ZNF532Q9HCE3 1301 aa21.17■□□□□ 0.98
SNRPA1-202ENST00000394082 GOLIM4O00461 696 aa21.16■□□□□ 0.98
SNRPA1-202ENST00000394082 PTPREP23469 700 aa21.16■□□□□ 0.98
SNRPA1-202ENST00000394082 CWC22Q9HCG8 908 aaKnown RBP21.16■□□□□ 0.98
SNRPA1-202ENST00000394082 ATP8A2Q9NTI2 1148 aa21.16■□□□□ 0.98
SNRPA1-202ENST00000394082 HOXC10Q9NYD6 342 aa21.16■□□□□ 0.98
SNRPA1-202ENST00000394082 STAP2Q9UGK3 403 aa21.16■□□□□ 0.98
SNRPA1-202ENST00000394082 SPDYE16A6NNV3 312 aaPredicted RBP21.15■□□□□ 0.98
SNRPA1-202ENST00000394082 ATP5JP18859 108 aa21.15■□□□□ 0.98
SNRPA1-202ENST00000394082 GRB14Q14449 540 aa21.15■□□□□ 0.98
SNRPA1-202ENST00000394082 SEPT2Q15019 361 aa21.15■□□□□ 0.98
SNRPA1-202ENST00000394082 CCL14Q16627 93 aa21.15■□□□□ 0.98
SNRPA1-202ENST00000394082 TMEM179Q6ZVK1 233 aa21.15■□□□□ 0.98
SNRPA1-202ENST00000394082 RPAP3Q9H6T3 665 aaPredicted RBP21.15■□□□□ 0.98
SNRPA1-202ENST00000394082 DNAH12Q6ZR08 3092 aa21.14■□□□□ 0.98
SNRPA1-202ENST00000394082 PFASO15067 1338 aa21.14■□□□□ 0.97
SNRPA1-202ENST00000394082 MSCO60682 206 aa21.14■□□□□ 0.97
SNRPA1-202ENST00000394082 IGHA2P01877 340 aa21.14■□□□□ 0.97
SNRPA1-202ENST00000394082 COG2Q14746 738 aa21.14■□□□□ 0.97
SNRPA1-202ENST00000394082 MFSD14CQ5VZR4 134 aa21.14■□□□□ 0.97
SNRPA1-202ENST00000394082 GPR153Q6NV75 609 aa21.14■□□□□ 0.97
SNRPA1-202ENST00000394082 C7orf61Q8IZ16 206 aa21.14■□□□□ 0.97
SNRPA1-202ENST00000394082 LPAR1Q92633 364 aa21.14■□□□□ 0.97
SNRPA1-202ENST00000394082 DNAJC2Q99543 621 aaKnown RBP21.14■□□□□ 0.97
SNRPA1-202ENST00000394082 PAG1Q9NWQ8 432 aa21.14■□□□□ 0.97
SNRPA1-202ENST00000394082 BTBD7Q9P203 1132 aa21.14■□□□□ 0.97
SNRPA1-202ENST00000394082 IVNS1ABPQ9Y6Y0 642 aa21.14■□□□□ 0.97
SNRPA1-202ENST00000394082 A0A1W2PRG0 241 aa21.13■□□□□ 0.97
SNRPA1-202ENST00000394082 STRNO43815 780 aa21.13■□□□□ 0.97
SNRPA1-202ENST00000394082 CCND3P30281 292 aaPredicted RBP21.13■□□□□ 0.97
SNRPA1-202ENST00000394082 ADD2P35612 726 aa21.13■□□□□ 0.97
SNRPA1-202ENST00000394082 LCORLQ8N3X6 602 aa21.13■□□□□ 0.97
SNRPA1-202ENST00000394082 MB21D1Q8N884 522 aa21.13■□□□□ 0.97
SNRPA1-202ENST00000394082 SDR42E1Q8WUS8 393 aa21.13■□□□□ 0.97
SNRPA1-202ENST00000394082 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.13■□□□□ 0.97
SNRPA1-202ENST00000394082 COG6Q9Y2V7 657 aa21.13■□□□□ 0.97
SNRPA1-202ENST00000394082 SHCBP1Q8NEM2 672 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms