RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 PNMA1Q8ND90 353 aa20.33■□□□□ 0.85
MBD4-202ENST00000393278 CTCFLQ8NI51 663 aaPredicted RBP20.33■□□□□ 0.85
MBD4-202ENST00000393278 MAP3K14Q99558 947 aa20.33■□□□□ 0.85
MBD4-202ENST00000393278 RNF26Q9BY78 433 aaPredicted RBP20.33■□□□□ 0.85
MBD4-202ENST00000393278 TAOK2Q9UL54 1235 aa20.33■□□□□ 0.85
MBD4-202ENST00000393278 COL2A1P02458 1487 aaPredicted RBP20.33■□□□□ 0.84
MBD4-202ENST00000393278 DEXIO95424 95 aa20.32■□□□□ 0.84
MBD4-202ENST00000393278 DLGAP5Q15398 846 aa20.32■□□□□ 0.84
MBD4-202ENST00000393278 TMTC3Q6ZXV5 915 aa20.32■□□□□ 0.84
MBD4-202ENST00000393278 CMTR1Q8N1G2 835 aaKnown RBP20.32■□□□□ 0.84
MBD4-202ENST00000393278 GPT2Q8TD30 523 aa20.32■□□□□ 0.84
MBD4-202ENST00000393278 GJB4Q9NTQ9 266 aa20.32■□□□□ 0.84
MBD4-202ENST00000393278 DDTLA6NHG4 134 aaPredicted RBP20.32■□□□□ 0.84
MBD4-202ENST00000393278 PLEKHA8P1O95397 391 aa20.32■□□□□ 0.84
MBD4-202ENST00000393278 MBD3O95983 291 aa20.32■□□□□ 0.84
MBD4-202ENST00000393278 SHMT1P34896 483 aa20.32■□□□□ 0.84
MBD4-202ENST00000393278 RASSF7Q02833 373 aa20.32■□□□□ 0.84
MBD4-202ENST00000393278 GSE1Q14687 1217 aa20.32■□□□□ 0.84
MBD4-202ENST00000393278 TNIP1Q15025 636 aa20.32■□□□□ 0.84
MBD4-202ENST00000393278 SH3BP5LQ7L8J4 393 aa20.32■□□□□ 0.84
MBD4-202ENST00000393278 CCDC82Q8N4S0 544 aa20.32■□□□□ 0.84
MBD4-202ENST00000393278 TMEM47Q9BQJ4 181 aa20.32■□□□□ 0.84
MBD4-202ENST00000393278 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.32■□□□□ 0.84
MBD4-202ENST00000393278 PI4KBQ9UBF8 816 aa20.32■□□□□ 0.84
MBD4-202ENST00000393278 STX8Q9UNK0 236 aa20.32■□□□□ 0.84
MBD4-202ENST00000393278 SIPA1L1O43166 1804 aa20.31■□□□□ 0.84
MBD4-202ENST00000393278 ATRNL1Q5VV63 1379 aa20.31■□□□□ 0.84
MBD4-202ENST00000393278 UBE2Q2LH0YL09 131 aa20.31■□□□□ 0.84
MBD4-202ENST00000393278 GUCY1A2P33402 732 aa20.31■□□□□ 0.84
MBD4-202ENST00000393278 KRT40Q6A162 431 aa20.31■□□□□ 0.84
MBD4-202ENST00000393278 MTMR14Q8NCE2 650 aa20.31■□□□□ 0.84
MBD4-202ENST00000393278 CEP95Q96GE4 821 aa20.31■□□□□ 0.84
MBD4-202ENST00000393278 TMOD2Q9NZR1 351 aa20.31■□□□□ 0.84
MBD4-202ENST00000393278 MYH8P13535 1937 aa20.3■□□□□ 0.84
MBD4-202ENST00000393278 GADD45BO75293 160 aaPredicted RBP20.3■□□□□ 0.84
MBD4-202ENST00000393278 AKR1B1P15121 316 aa20.3■□□□□ 0.84
MBD4-202ENST00000393278 KIF5BP33176 963 aa20.3■□□□□ 0.84
MBD4-202ENST00000393278 TRIM29Q14134 588 aa20.3■□□□□ 0.84
MBD4-202ENST00000393278 SCAND2PQ9GZW5 306 aaPredicted RBP20.3■□□□□ 0.84
MBD4-202ENST00000393278 GZF1Q9H116 711 aaPredicted RBP20.3■□□□□ 0.84
MBD4-202ENST00000393278 MYH15Q9Y2K3 1946 aa20.3■□□□□ 0.84
MBD4-202ENST00000393278 ELP1O95163 1332 aa20.3■□□□□ 0.84
MBD4-202ENST00000393278 IGKV6D-41A0A0C4DH26 115 aa20.29■□□□□ 0.84
MBD4-202ENST00000393278 PRPF3O43395 683 aaKnown RBP20.29■□□□□ 0.84
MBD4-202ENST00000393278 KIF23Q02241 960 aaPredicted RBP20.29■□□□□ 0.84
MBD4-202ENST00000393278 GRM4Q14833 912 aa20.29■□□□□ 0.84
MBD4-202ENST00000393278 ZSCAN29Q8IWY8 852 aaPredicted RBP20.29■□□□□ 0.84
MBD4-202ENST00000393278 DNAJC18Q9H819 358 aa20.29■□□□□ 0.84
MBD4-202ENST00000393278 ZNF70Q9UC06 446 aaPredicted RBP20.29■□□□□ 0.84
MBD4-202ENST00000393278 CNTNAP5Q8WYK1 1306 aa20.29■□□□□ 0.84
MBD4-202ENST00000393278 MMP14P50281 582 aa20.29■□□□□ 0.84
MBD4-202ENST00000393278 PRELPP51888 382 aa20.29■□□□□ 0.84
MBD4-202ENST00000393278 UBE2HP62256 183 aa20.29■□□□□ 0.84
MBD4-202ENST00000393278 AKAP17AQ02040 695 aaKnown RBP20.29■□□□□ 0.84
MBD4-202ENST00000393278 SPDYE2Q495Y8 402 aa20.29■□□□□ 0.84
MBD4-202ENST00000393278 ATL3Q6DD88 541 aa20.29■□□□□ 0.84
MBD4-202ENST00000393278 BRAPQ7Z569 592 aa20.29■□□□□ 0.84
MBD4-202ENST00000393278 SRBD1Q8N5C6 995 aaKnown RBP20.29■□□□□ 0.84
MBD4-202ENST00000393278 TFIP11Q9UBB9 837 aaKnown RBP20.29■□□□□ 0.84
MBD4-202ENST00000393278 CFAP45Q9UL16 551 aa20.29■□□□□ 0.84
MBD4-202ENST00000393278 TOP1P11387 765 aaKnown RBP20.28■□□□□ 0.84
MBD4-202ENST00000393278 RPS12P25398 132 aaKnown RBP20.28■□□□□ 0.84
MBD4-202ENST00000393278 METTL16Q86W50 562 aaKnown RBP20.28■□□□□ 0.84
MBD4-202ENST00000393278 FOXP4Q8IVH2 680 aaPredicted RBP20.28■□□□□ 0.84
MBD4-202ENST00000393278 ZBED3Q96IU2 234 aaPredicted RBP20.28■□□□□ 0.84
MBD4-202ENST00000393278 CCDC17Q96LX7 622 aa20.28■□□□□ 0.84
MBD4-202ENST00000393278 MTMR4Q9NYA4 1195 aa20.28■□□□□ 0.84
MBD4-202ENST00000393278 CLRN2A0PK11 232 aa20.27■□□□□ 0.84
MBD4-202ENST00000393278 FZD9O00144 591 aa20.27■□□□□ 0.84
MBD4-202ENST00000393278 PKN1Q16512 942 aa20.27■□□□□ 0.84
MBD4-202ENST00000393278 SPATA32Q96LK8 384 aa20.27■□□□□ 0.84
MBD4-202ENST00000393278 ZNF396Q96N95 335 aaPredicted RBP20.27■□□□□ 0.84
MBD4-202ENST00000393278 GREB1LQ9C091 1923 aaPredicted RBP20.27■□□□□ 0.84
MBD4-202ENST00000393278 KIF28PB7ZC32 967 aa20.26■□□□□ 0.83
MBD4-202ENST00000393278 SLURP2P0DP57 97 aa20.26■□□□□ 0.83
MBD4-202ENST00000393278 GNAQP50148 359 aa20.26■□□□□ 0.83
MBD4-202ENST00000393278 FKBP1CQ5VVH2 108 aa20.26■□□□□ 0.83
MBD4-202ENST00000393278 LEO1Q8WVC0 666 aaPredicted RBP20.26■□□□□ 0.83
MBD4-202ENST00000393278 MAD2L2Q9UI95 211 aa20.26■□□□□ 0.83
MBD4-202ENST00000393278 V9GY48 417 aaPredicted RBP20.26■□□□□ 0.83
MBD4-202ENST00000393278 MYH6P13533 1939 aa20.26■□□□□ 0.83
MBD4-202ENST00000393278 TCP10L2B9ZVM9 353 aa20.26■□□□□ 0.83
MBD4-202ENST00000393278 CAVIN1Q6NZI2 390 aaKnown RBP20.26■□□□□ 0.83
MBD4-202ENST00000393278 TATDN1Q6P1N9 297 aa20.26■□□□□ 0.83
MBD4-202ENST00000393278 TRIM34Q9BYJ4 488 aa20.26■□□□□ 0.83
MBD4-202ENST00000393278 FHDC1Q9C0D6 1143 aaPredicted RBP20.26■□□□□ 0.83
MBD4-202ENST00000393278 MMP1P03956 469 aa20.25■□□□□ 0.83
MBD4-202ENST00000393278 EIF6P56537 245 aaKnown RBP20.25■□□□□ 0.83
MBD4-202ENST00000393278 ZNF280AP59817 542 aaPredicted RBP20.25■□□□□ 0.83
MBD4-202ENST00000393278 STAG2Q8N3U4 1231 aa20.25■□□□□ 0.83
MBD4-202ENST00000393278 FAM151AQ8WW52 585 aa20.25■□□□□ 0.83
MBD4-202ENST00000393278 USP28Q96RU2 1077 aa20.25■□□□□ 0.83
MBD4-202ENST00000393278 MYOZ2Q9NPC6 264 aa20.25■□□□□ 0.83
MBD4-202ENST00000393278 PALM3A6NDB9 673 aaPredicted RBP20.24■□□□□ 0.83
MBD4-202ENST00000393278 FAM196BA6NMK8 535 aa20.24■□□□□ 0.83
MBD4-202ENST00000393278 TTLL1O95922 423 aa20.24■□□□□ 0.83
MBD4-202ENST00000393278 U2AF2P26368 475 aaKnown RBP eCLIP20.24■□□□□ 0.836e-12■■■□□ 15.8
MBD4-202ENST00000393278 PPP4R3BQ5MIZ7 849 aa20.24■□□□□ 0.83
MBD4-202ENST00000393278 MYSM1Q5VVJ2 828 aa20.24■□□□□ 0.83
MBD4-202ENST00000393278 CSRNP1Q96S65 589 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms