RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 GDF11O95390 407 aa8.02□□□□□ -1.13
UBBP1-201ENST00000392399 RASA1P20936 1047 aa8.02□□□□□ -1.13
UBBP1-201ENST00000392399 NUBP1P53384 320 aa8.02□□□□□ -1.13
UBBP1-201ENST00000392399 USP14P54578 494 aa8.02□□□□□ -1.13
UBBP1-201ENST00000392399 BACE1P56817 501 aa8.02□□□□□ -1.13
UBBP1-201ENST00000392399 SPP2Q13103 211 aa8.02□□□□□ -1.13
UBBP1-201ENST00000392399 SH3D19Q5HYK7 790 aa8.02□□□□□ -1.13
UBBP1-201ENST00000392399 AKNAD1Q5T1N1 836 aa8.02□□□□□ -1.13
UBBP1-201ENST00000392399 MFSD6Q6ZSS7 791 aa8.02□□□□□ -1.13
UBBP1-201ENST00000392399 SLC44A5Q8NCS7 719 aa8.02□□□□□ -1.13
UBBP1-201ENST00000392399 IL25Q9H293 177 aa8.02□□□□□ -1.13
UBBP1-201ENST00000392399 SH2D4AQ9H788 454 aa8.02□□□□□ -1.13
UBBP1-201ENST00000392399 KANSL2Q9H9L4 492 aa8.02□□□□□ -1.13
UBBP1-201ENST00000392399 WBP1LQ9NX94 342 aa8.02□□□□□ -1.13
UBBP1-201ENST00000392399 SAGE1Q9NXZ1 904 aa8.02□□□□□ -1.13
UBBP1-201ENST00000392399 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.02□□□□□ -1.13
UBBP1-201ENST00000392399 DDX60LQ5H9U9 1706 aaKnown RBP8.02□□□□□ -1.13
UBBP1-201ENST00000392399 NAV1Q8NEY1 1877 aa8.02□□□□□ -1.13
UBBP1-201ENST00000392399 BAZ2AQ9UIF9 1905 aaKnown RBP8.01□□□□□ -1.13
UBBP1-201ENST00000392399 CCL15-CCL14A0A0B4J2E2 113 aa8.01□□□□□ -1.13
UBBP1-201ENST00000392399 A0A0G2JLL6 359 aaPredicted RBP8.01□□□□□ -1.13
UBBP1-201ENST00000392399 TSPY3P0CV98 308 aa8.01□□□□□ -1.13
UBBP1-201ENST00000392399 TSPY8P0CW00 308 aa8.01□□□□□ -1.13
UBBP1-201ENST00000392399 AKR1B1P15121 316 aa8.01□□□□□ -1.13
UBBP1-201ENST00000392399 JAG1P78504 1218 aa8.01□□□□□ -1.13
UBBP1-201ENST00000392399 CTDSPL2Q05D32 466 aa8.01□□□□□ -1.13
UBBP1-201ENST00000392399 MKRN3Q13064 507 aaKnown RBP8.01□□□□□ -1.13
UBBP1-201ENST00000392399 PABPC4Q13310 644 aaKnown RBP eCLIP8.01□□□□□ -1.13
UBBP1-201ENST00000392399 SEPT2Q15019 361 aa8.01□□□□□ -1.13
UBBP1-201ENST00000392399 RAB3GAP1Q15042 981 aa8.01□□□□□ -1.13
UBBP1-201ENST00000392399 CCL15Q16663 113 aa8.01□□□□□ -1.13
UBBP1-201ENST00000392399 PRRT2Q7Z6L0 340 aaPredicted RBP8.01□□□□□ -1.13
UBBP1-201ENST00000392399 IFNL1Q8IU54 200 aa8.01□□□□□ -1.13
UBBP1-201ENST00000392399 PROCA1Q8NCQ7 364 aaPredicted RBP8.01□□□□□ -1.13
UBBP1-201ENST00000392399 NEDD1Q8NHV4 660 aa8.01□□□□□ -1.13
UBBP1-201ENST00000392399 STAG1Q8WVM7 1258 aa8.01□□□□□ -1.13
UBBP1-201ENST00000392399 ZIC5Q96T25 663 aa8.01□□□□□ -1.13
UBBP1-201ENST00000392399 CFHR5Q9BXR6 569 aa8.01□□□□□ -1.13
UBBP1-201ENST00000392399 LSG1Q9H089 658 aaKnown RBP8.01□□□□□ -1.13
UBBP1-201ENST00000392399 KIAA1683Q9H0B3 1180 aa8.01□□□□□ -1.13
UBBP1-201ENST00000392399 CNNM2Q9H8M5 875 aa8.01□□□□□ -1.13
UBBP1-201ENST00000392399 SYNPO2Q9UMS6 1093 aa8.01□□□□□ -1.13
UBBP1-201ENST00000392399 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.01□□□□□ -1.13
UBBP1-201ENST00000392399 SLC45A1Q9Y2W3 748 aa8.01□□□□□ -1.13
UBBP1-201ENST00000392399 SIPA1L1O43166 1804 aa8.01□□□□□ -1.13
UBBP1-201ENST00000392399 TRIM75PA6NK02 468 aa8□□□□□ -1.13
UBBP1-201ENST00000392399 TSPY2A6NKD2 308 aa8□□□□□ -1.13
UBBP1-201ENST00000392399 SMIM22K7EJ46 135 aa8□□□□□ -1.13
UBBP1-201ENST00000392399 RANBP6O60518 1105 aaKnown RBP8□□□□□ -1.13
UBBP1-201ENST00000392399 PRDM1O75626 825 aa8□□□□□ -1.13
UBBP1-201ENST00000392399 REC8O95072 547 aa8□□□□□ -1.13
UBBP1-201ENST00000392399 GUCY1A2P33402 732 aa8□□□□□ -1.13
UBBP1-201ENST00000392399 TFAP4Q01664 338 aa8□□□□□ -1.13
UBBP1-201ENST00000392399 PTH1RQ03431 593 aa8□□□□□ -1.13
UBBP1-201ENST00000392399 ICA1Q05084 483 aa8□□□□□ -1.13
UBBP1-201ENST00000392399 TRDNQ13061 729 aa8□□□□□ -1.13
UBBP1-201ENST00000392399 CCDC178Q5BJE1 867 aa8□□□□□ -1.13
UBBP1-201ENST00000392399 RNF20Q5VTR2 975 aa8□□□□□ -1.13
UBBP1-201ENST00000392399 USP17L2Q6R6M4 530 aa8□□□□□ -1.13
UBBP1-201ENST00000392399 ANKRD23Q86SG2 305 aa8□□□□□ -1.13
UBBP1-201ENST00000392399 STK11IPQ8N1F8 1099 aa8□□□□□ -1.13
UBBP1-201ENST00000392399 BRI3BPQ8WY22 251 aa8□□□□□ -1.13
UBBP1-201ENST00000392399 ESR2Q92731 530 aa8□□□□□ -1.13
UBBP1-201ENST00000392399 MKL1Q969V6 931 aa8□□□□□ -1.13
UBBP1-201ENST00000392399 C12orf42Q96LP6 360 aa8□□□□□ -1.13
UBBP1-201ENST00000392399 TTC14Q96N46 770 aa8□□□□□ -1.13
UBBP1-201ENST00000392399 KRT23Q9C075 422 aa8□□□□□ -1.13
UBBP1-201ENST00000392399 ARHGEF10LQ9HCE6 1279 aa8□□□□□ -1.13
UBBP1-201ENST00000392399 ANO2Q9NQ90 1003 aa8□□□□□ -1.13
UBBP1-201ENST00000392399 TCP11L1Q9NUJ3 509 aa8□□□□□ -1.13
UBBP1-201ENST00000392399 TMOD4Q9NZQ9 345 aa8□□□□□ -1.13
UBBP1-201ENST00000392399 NYAP2Q9P242 653 aa8□□□□□ -1.13
UBBP1-201ENST00000392399 TMX2Q9Y320 296 aa8□□□□□ -1.13
UBBP1-201ENST00000392399 RBM8AQ9Y5S9 174 aaKnown RBP8□□□□□ -1.13
UBBP1-201ENST00000392399 OTOFQ9HC10 1997 aa7.99□□□□□ -1.13
UBBP1-201ENST00000392399 IGKV6D-41A0A0C4DH26 115 aa7.99□□□□□ -1.13
UBBP1-201ENST00000392399 BTBD19C9JJ37 291 aa7.99□□□□□ -1.13
UBBP1-201ENST00000392399 ATMINO43313 823 aaPredicted RBP7.99□□□□□ -1.13
UBBP1-201ENST00000392399 TTLL1O95922 423 aa7.99□□□□□ -1.13
UBBP1-201ENST00000392399 CYP21A2P08686 494 aa7.99□□□□□ -1.13
UBBP1-201ENST00000392399 HOXA7P31268 230 aaPredicted RBP7.99□□□□□ -1.13
UBBP1-201ENST00000392399 HAND2P61296 217 aa7.99□□□□□ -1.13
UBBP1-201ENST00000392399 MOGSQ13724 837 aa7.99□□□□□ -1.13
UBBP1-201ENST00000392399 NECTIN1Q15223 517 aa7.99□□□□□ -1.13
UBBP1-201ENST00000392399 NOM1Q5C9Z4 860 aaKnown RBP7.99□□□□□ -1.13
UBBP1-201ENST00000392399 CCDC84Q86UT8 332 aaPredicted RBP7.99□□□□□ -1.13
UBBP1-201ENST00000392399 IQCA1Q86XH1 822 aa7.99□□□□□ -1.13
UBBP1-201ENST00000392399 SIAH1Q8IUQ4 282 aa7.99□□□□□ -1.13
UBBP1-201ENST00000392399 LPAR1Q92633 364 aa7.99□□□□□ -1.13
UBBP1-201ENST00000392399 FEZ1Q99689 392 aa7.99□□□□□ -1.13
UBBP1-201ENST00000392399 PTPN18Q99952 460 aa7.99□□□□□ -1.13
UBBP1-201ENST00000392399 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.99□□□□□ -1.13
UBBP1-201ENST00000392399 TOMM22Q9NS69 142 aa7.99□□□□□ -1.13
UBBP1-201ENST00000392399 RNF186Q9NXI6 227 aa7.99□□□□□ -1.13
UBBP1-201ENST00000392399 MTMR4Q9NYA4 1195 aa7.99□□□□□ -1.13
UBBP1-201ENST00000392399 PNMA3Q9UL41 463 aa7.99□□□□□ -1.13
UBBP1-201ENST00000392399 AGTPBP1Q9UPW5 1226 aa7.99□□□□□ -1.13
UBBP1-201ENST00000392399 PLIN4Q96Q06 1357 aa7.98□□□□□ -1.13
UBBP1-201ENST00000392399 DOCK1Q14185 1865 aa7.98□□□□□ -1.13
UBBP1-201ENST00000392399 A0A1W2PRG0 241 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms