RNA–Protein interactions for RNA: ENST00000391310.1

RNU6-1239P-201, Transcript of RNA, U6 small nuclear 1239, pseudogene, humanhuman

BASIC

Gene RNU6-1239P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1239P-201ENST00000391310 VWCEQ96DN2 955 aa2.44□□□□□ -2.02
RNU6-1239P-201ENST00000391310 ACSBG1Q96GR2 724 aa2.44□□□□□ -2.02
RNU6-1239P-201ENST00000391310 NECAB3Q96P71 396 aaPredicted RBP2.44□□□□□ -2.02
RNU6-1239P-201ENST00000391310 MIPEPQ99797 713 aa2.44□□□□□ -2.02
RNU6-1239P-201ENST00000391310 SIRT5Q9NXA8 310 aa2.44□□□□□ -2.02
RNU6-1239P-201ENST00000391310 SLAIN2Q9P270 581 aa2.44□□□□□ -2.02
RNU6-1239P-201ENST00000391310 FAM13AO94988 1023 aa2.43□□□□□ -2.02
RNU6-1239P-201ENST00000391310 ATG7O95352 703 aa2.43□□□□□ -2.02
RNU6-1239P-201ENST00000391310 C6P13671 934 aa2.43□□□□□ -2.02
RNU6-1239P-201ENST00000391310 CYP7A1P22680 504 aa2.43□□□□□ -2.02
RNU6-1239P-201ENST00000391310 ACVRL1P37023 503 aa2.43□□□□□ -2.02
RNU6-1239P-201ENST00000391310 UBXN11Q5T124 520 aa2.43□□□□□ -2.02
RNU6-1239P-201ENST00000391310 CPZQ66K79 652 aa2.43□□□□□ -2.02
RNU6-1239P-201ENST00000391310 LETMD1Q6P1Q0 360 aa2.43□□□□□ -2.02
RNU6-1239P-201ENST00000391310 C12orf40Q86WS4 652 aa2.43□□□□□ -2.02
RNU6-1239P-201ENST00000391310 TMEFF1Q8IYR6 380 aa2.43□□□□□ -2.02
RNU6-1239P-201ENST00000391310 MFSD2AQ8NA29 543 aa2.43□□□□□ -2.02
RNU6-1239P-201ENST00000391310 C1QTNF3Q9BXJ4 246 aa2.43□□□□□ -2.02
RNU6-1239P-201ENST00000391310 EMILIN2Q9BXX0 1053 aa2.43□□□□□ -2.02
RNU6-1239P-201ENST00000391310 KRTAP3-1Q9BYR8 98 aa2.43□□□□□ -2.02
RNU6-1239P-201ENST00000391310 CNTD2Q9H8S5 307 aa2.43□□□□□ -2.02
RNU6-1239P-201ENST00000391310 NPHS2Q9NP85 383 aa2.43□□□□□ -2.02
RNU6-1239P-201ENST00000391310 SMPD4Q9NXE4 827 aa2.43□□□□□ -2.02
RNU6-1239P-201ENST00000391310 GPR160Q9UJ42 338 aa2.43□□□□□ -2.02
RNU6-1239P-201ENST00000391310 TRAK1Q9UPV9 953 aa2.43□□□□□ -2.02
RNU6-1239P-201ENST00000391310 CSADQ9Y600 493 aa2.43□□□□□ -2.02
RNU6-1239P-201ENST00000391310 WASH4PA8MWX3 477 aa2.42□□□□□ -2.02
RNU6-1239P-201ENST00000391310 DCDC2CA8MYV0 355 aa2.42□□□□□ -2.02
RNU6-1239P-201ENST00000391310 NEFLP07196 543 aa2.42□□□□□ -2.02
RNU6-1239P-201ENST00000391310 TACR2P21452 398 aa2.42□□□□□ -2.02
RNU6-1239P-201ENST00000391310 NME2P22392 152 aa2.42□□□□□ -2.02
RNU6-1239P-201ENST00000391310 TPP2P29144 1249 aaPredicted RBP2.42□□□□□ -2.02
RNU6-1239P-201ENST00000391310 KCNC1P48547 511 aa2.42□□□□□ -2.02
RNU6-1239P-201ENST00000391310 CAP1Q01518 475 aa2.42□□□□□ -2.02
RNU6-1239P-201ENST00000391310 EGR3Q06889 387 aa2.42□□□□□ -2.02
RNU6-1239P-201ENST00000391310 MTMR3Q13615 1198 aa2.42□□□□□ -2.02
RNU6-1239P-201ENST00000391310 SLBPQ14493 270 aaKnown RBP eCLIP2.42□□□□□ -2.02
RNU6-1239P-201ENST00000391310 ADGRF1Q5T601 910 aa2.42□□□□□ -2.02
RNU6-1239P-201ENST00000391310 RIN3Q8TB24 985 aa2.42□□□□□ -2.02
RNU6-1239P-201ENST00000391310 MZB1Q8WU39 189 aa2.42□□□□□ -2.02
RNU6-1239P-201ENST00000391310 PWWP2AQ96N64 755 aa2.42□□□□□ -2.02
RNU6-1239P-201ENST00000391310 DUSP15Q9H1R2 295 aaPredicted RBP2.42□□□□□ -2.02
RNU6-1239P-201ENST00000391310 TRIT1Q9H3H1 467 aaKnown RBP2.42□□□□□ -2.02
RNU6-1239P-201ENST00000391310 CCDC87Q9NVE4 849 aa2.42□□□□□ -2.02
RNU6-1239P-201ENST00000391310 GPN3Q9UHW5 284 aaPredicted RBP2.42□□□□□ -2.02
RNU6-1239P-201ENST00000391310 TRIM37O94972 964 aa2.41□□□□□ -2.02
RNU6-1239P-201ENST00000391310 ITGB3P05106 788 aa2.41□□□□□ -2.02
RNU6-1239P-201ENST00000391310 VIPR1P32241 457 aa2.41□□□□□ -2.02
RNU6-1239P-201ENST00000391310 CDR1P51861 262 aa2.41□□□□□ -2.02
RNU6-1239P-201ENST00000391310 SLURP1P55000 103 aa2.41□□□□□ -2.02
RNU6-1239P-201ENST00000391310 YBX1P67809 324 aaKnown RBP2.41□□□□□ -2.02
RNU6-1239P-201ENST00000391310 SRPK2P78362 688 aaKnown RBP2.41□□□□□ -2.02
RNU6-1239P-201ENST00000391310 PLCB3Q01970 1234 aa2.41□□□□□ -2.02
RNU6-1239P-201ENST00000391310 OLFML2BQ68BL8 750 aa2.41□□□□□ -2.02
RNU6-1239P-201ENST00000391310 NLRX1Q86UT6 975 aa2.41□□□□□ -2.02
RNU6-1239P-201ENST00000391310 ZFPM1Q8IX07 1006 aa2.41□□□□□ -2.02
RNU6-1239P-201ENST00000391310 ANKS4BQ8N8V4 417 aa2.41□□□□□ -2.02
RNU6-1239P-201ENST00000391310 SYTL4Q96C24 671 aaPredicted RBP2.41□□□□□ -2.02
RNU6-1239P-201ENST00000391310 FBRSQ9HAH7 460 aa2.41□□□□□ -2.02
RNU6-1239P-201ENST00000391310 GPATCH2Q9NW75 528 aa2.41□□□□□ -2.02
RNU6-1239P-201ENST00000391310 DUSP13Q9UII6 198 aa2.41□□□□□ -2.02
RNU6-1239P-201ENST00000391310 NOTOA8MTQ0 251 aa2.4□□□□□ -2.03
RNU6-1239P-201ENST00000391310 ABLIM1O14639 778 aa2.4□□□□□ -2.03
RNU6-1239P-201ENST00000391310 FFAR3O14843 346 aa2.4□□□□□ -2.03
RNU6-1239P-201ENST00000391310 CPNE3O75131 537 aaKnown RBP2.4□□□□□ -2.03
RNU6-1239P-201ENST00000391310 XRCC5P13010 732 aaKnown RBP2.4□□□□□ -2.03
RNU6-1239P-201ENST00000391310 ZNF20P17024 532 aa2.4□□□□□ -2.03
RNU6-1239P-201ENST00000391310 TGM1P22735 817 aa2.4□□□□□ -2.03
RNU6-1239P-201ENST00000391310 GALK1P51570 392 aa2.4□□□□□ -2.03
RNU6-1239P-201ENST00000391310 DUSP4Q13115 394 aa2.4□□□□□ -2.03
RNU6-1239P-201ENST00000391310 GRM2Q14416 872 aa2.4□□□□□ -2.03
RNU6-1239P-201ENST00000391310 NKG7Q16617 165 aa2.4□□□□□ -2.03
RNU6-1239P-201ENST00000391310 SCARA3Q6AZY7 606 aa2.4□□□□□ -2.03
RNU6-1239P-201ENST00000391310 MPRIPQ6WCQ1 1025 aa2.4□□□□□ -2.03
RNU6-1239P-201ENST00000391310 DTHD1Q6ZMT9 781 aa2.4□□□□□ -2.03
RNU6-1239P-201ENST00000391310 TSPYL5Q86VY4 417 aaPredicted RBP2.4□□□□□ -2.03
RNU6-1239P-201ENST00000391310 IGDCC3Q8IVU1 814 aa2.4□□□□□ -2.03
RNU6-1239P-201ENST00000391310 Q8N1X5 172 aa2.4□□□□□ -2.03
RNU6-1239P-201ENST00000391310 TTC9BQ8N6N2 239 aa2.4□□□□□ -2.03
RNU6-1239P-201ENST00000391310 LINC01599Q8WXQ3 324 aa2.4□□□□□ -2.03
RNU6-1239P-201ENST00000391310 GPR62Q9BZJ7 368 aa2.4□□□□□ -2.03
RNU6-1239P-201ENST00000391310 CRTAC1Q9NQ79 661 aa2.4□□□□□ -2.03
RNU6-1239P-201ENST00000391310 EBF1Q9UH73 591 aa2.4□□□□□ -2.03
RNU6-1239P-201ENST00000391310 GADD45BO75293 160 aaPredicted RBP2.39□□□□□ -2.03
RNU6-1239P-201ENST00000391310 EFEMP2O95967 443 aa2.39□□□□□ -2.03
RNU6-1239P-201ENST00000391310 CST3P01034 146 aaPredicted RBP2.39□□□□□ -2.03
RNU6-1239P-201ENST00000391310 LTKP29376 864 aa2.39□□□□□ -2.03
RNU6-1239P-201ENST00000391310 SF3B2Q13435 895 aaKnown RBP2.39□□□□□ -2.03
RNU6-1239P-201ENST00000391310 CRIP3Q6Q6R5 217 aa2.39□□□□□ -2.03
RNU6-1239P-201ENST00000391310 FERMT3Q86UX7 667 aa2.39□□□□□ -2.03
RNU6-1239P-201ENST00000391310 CCDC74AQ96AQ1 378 aa2.39□□□□□ -2.03
RNU6-1239P-201ENST00000391310 Q96M66 194 aa2.39□□□□□ -2.03
RNU6-1239P-201ENST00000391310 RBM15Q96T37 977 aaKnown RBP eCLIP2.39□□□□□ -2.03
RNU6-1239P-201ENST00000391310 CBX8Q9HC52 389 aa2.39□□□□□ -2.03
RNU6-1239P-201ENST00000391310 USP40Q9NVE5 1235 aa2.39□□□□□ -2.03
RNU6-1239P-201ENST00000391310 PCDHA11Q9Y5I1 949 aa2.39□□□□□ -2.03
RNU6-1239P-201ENST00000391310 RBAK-RBAKDNI3L0D1 243 aa2.38□□□□□ -2.03
RNU6-1239P-201ENST00000391310 FZD7O75084 574 aa2.38□□□□□ -2.03
RNU6-1239P-201ENST00000391310 ETV3P41162 512 aa2.38□□□□□ -2.03
RNU6-1239P-201ENST00000391310 FCGRTP55899 365 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms