RNA–Protein interactions for RNA: ENST00000390919.1

RNU6-220P-201, Transcript of RNA, U6 small nuclear 220, pseudogene, humanhuman

BASIC

Gene RNU6-220P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-220P-201ENST00000390919 EXOC5O00471 708 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 GABRDO14764 452 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 ERC2O15083 957 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 ZNF500O60304 480 aaPredicted RBP3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 DNAJC8O75937 253 aaPredicted RBP3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 SMNDC1O75940 238 aaKnown RBP eCLIP3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 ABLIM3O94929 683 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 GHRHP01286 108 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 JMJD7P0C870 316 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 MYBL2P10244 700 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 NME1P15531 152 aaKnown RBP3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 RAG1P15918 1043 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 PLCG1P19174 1290 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 NFKB1P19838 968 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 IGFALSP35858 605 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 CASP2P42575 452 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 PCDH1Q08174 1060 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 BIRC3Q13489 604 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 NEUROD1Q13562 356 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 CFAP100Q494V2 611 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 ARHGAP29Q52LW3 1261 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 COBLL1Q53SF7 1204 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 EFHC2Q5JST6 749 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 FAM83BQ5T0W9 1011 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 SAMD5Q5TGI4 173 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 EFCAB2Q5VUJ9 269 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 MAP1SQ66K74 1059 aaPredicted RBP3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 CCDC174Q6PII3 467 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 C1orf228Q6PIY5 440 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 NSMFQ6X4W1 530 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 LHFPL2Q6ZUX7 228 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 LYSMD3Q7Z3D4 306 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 PRICKLE2Q7Z3G6 844 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 PNMA8AQ86V59 439 aaPredicted RBP3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 CEP120Q8N960 986 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 TRIM63Q969Q1 353 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 NXPE3Q969Y0 559 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 GAL3ST3Q96A11 431 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 DHRS1Q96LJ7 313 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 NSUN5Q96P11 429 aaKnown RBP3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 CDC5LQ99459 802 aaKnown RBP3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 HERPUD2Q9BSE4 406 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 RHOBTB2Q9BYZ6 727 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 ZFAND3Q9H8U3 227 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 EFCC1Q9HA90 598 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 AS3MTQ9HBK9 375 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 GPAMQ9HCL2 828 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 MAN1C1Q9NR34 630 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 ARHGEF4Q9NR80 690 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 STRN4Q9NRL3 753 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 REV1Q9UBZ9 1251 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 PNMA8BQ9ULN7 279 aaPredicted RBP3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 FAM50BQ9Y247 325 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 ANKRD6Q9Y2G4 727 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 TNPO3Q9Y5L0 923 aaKnown RBP3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 LTBP3Q9NS15 1303 aa3.12□□□□□ -1.91
RNU6-220P-201ENST00000390919 ANO9A1A5B4 782 aa3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 NOP56O00567 594 aaKnown RBP3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 PRODHO43272 600 aa3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 PRPF3O43395 683 aaKnown RBP3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 SLC26A4O43511 780 aa3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 ST18O60284 1047 aa3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 B3GALT4O96024 378 aa3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 PF4V1P10720 104 aa3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 FGFR1P11362 822 aa3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 PABPC1P11940 636 aaKnown RBP3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 COL6A1P12109 1028 aa3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 VCAM1P19320 739 aa3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 POU3F2P20265 443 aaPredicted RBP3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 CYP2C19P33261 490 aa3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 HTR3AP46098 478 aa3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 KCNQ4P56696 695 aa3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 IL2P60568 153 aa3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 PPP2R2AP63151 447 aa3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 GABREP78334 506 aa3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 KCNC4Q03721 635 aa3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 FAPQ12884 760 aa3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 CHAF1AQ13111 956 aaPredicted RBP3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 AP3B2Q13367 1082 aa3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 GTF2H3Q13889 308 aa3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 PCBP1Q15365 356 aaKnown RBP eCLIP3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 ZYXQ15942 572 aaKnown RBP3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 ABCB5Q2M3G0 1257 aa3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 WIPI1Q5MNZ9 446 aaPredicted RBP3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 RASIP1Q5U651 963 aa3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 YOD1Q5VVQ6 348 aaPredicted RBP3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 HEATR6Q6AI08 1181 aaKnown RBP3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 ERAP2Q6P179 960 aa3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 FIGNL1Q6PIW4 674 aa3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 HDXQ7Z353 690 aa3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 BRAPQ7Z569 592 aa3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 C11orf74Q86VG3 221 aa3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 FCHSD1Q86WN1 690 aa3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 TPH2Q8IWU9 490 aa3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 IFNL2Q8IZJ0 200 aa3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 MICALL1Q8N3F8 863 aa3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 MEIOBQ8N635 442 aa3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 LRRN4CLQ8ND94 238 aa3.11□□□□□ -1.91
RNU6-220P-201ENST00000390919 GRIN3AQ8TCU5 1115 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms