RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 ATP2B2Q01814 1243 aa14.54□□□□□ -0.08
SOD1-202ENST00000389995 SH3RF1Q7Z6J0 888 aa14.54□□□□□ -0.08
SOD1-202ENST00000389995 LPAR1Q92633 364 aa14.54□□□□□ -0.08
SOD1-202ENST00000389995 TRIM34Q9BYJ4 488 aa14.54□□□□□ -0.08
SOD1-202ENST00000389995 FLT1P17948 1338 aa14.54□□□□□ -0.08
SOD1-202ENST00000389995 CHD9Q3L8U1 2897 aa14.53□□□□□ -0.08
SOD1-202ENST00000389995 BDP1A6H8Y1 2624 aa14.53□□□□□ -0.08
SOD1-202ENST00000389995 PLXNA1Q9UIW2 1896 aa14.53□□□□□ -0.08
SOD1-202ENST00000389995 COL11A1P12107 1806 aaPredicted RBP14.53□□□□□ -0.08
SOD1-202ENST00000389995 DNM1LO00429 736 aa14.53□□□□□ -0.08
SOD1-202ENST00000389995 ANP32CO43423 234 aa14.53□□□□□ -0.08
SOD1-202ENST00000389995 GH2P01242 217 aa14.53□□□□□ -0.08
SOD1-202ENST00000389995 PTPREP23469 700 aa14.53□□□□□ -0.08
SOD1-202ENST00000389995 ARID4AP29374 1257 aaPredicted RBP14.53□□□□□ -0.08
SOD1-202ENST00000389995 TRIM60Q495X7 471 aa14.53□□□□□ -0.08
SOD1-202ENST00000389995 NAA16Q6N069 864 aaPredicted RBP14.53□□□□□ -0.08
SOD1-202ENST00000389995 USP17L2Q6R6M4 530 aa14.53□□□□□ -0.08
SOD1-202ENST00000389995 CDCA7LQ96GN5 454 aa14.53□□□□□ -0.08
SOD1-202ENST00000389995 NOL10Q9BSC4 688 aaKnown RBP14.53□□□□□ -0.08
SOD1-202ENST00000389995 DHX36Q9H2U1 1008 aaKnown RBP14.53□□□□□ -0.08
SOD1-202ENST00000389995 RNF216Q9NWF9 866 aaPredicted RBP14.53□□□□□ -0.08
SOD1-202ENST00000389995 BTBD7Q9P203 1132 aa14.53□□□□□ -0.08
SOD1-202ENST00000389995 RAPGEFL1Q9UHV5 662 aa14.53□□□□□ -0.08
SOD1-202ENST00000389995 MYH8P13535 1937 aa14.53□□□□□ -0.08
SOD1-202ENST00000389995 FOSL2P15408 326 aa14.52□□□□□ -0.09
SOD1-202ENST00000389995 DYNLL1P63167 89 aaKnown RBP14.52□□□□□ -0.09
SOD1-202ENST00000389995 SLC39A5Q6ZMH5 540 aa14.52□□□□□ -0.09
SOD1-202ENST00000389995 METTL16Q86W50 562 aaKnown RBP14.52□□□□□ -0.09
SOD1-202ENST00000389995 FOXP4Q8IVH2 680 aaPredicted RBP14.52□□□□□ -0.09
SOD1-202ENST00000389995 FERMT2Q96AC1 680 aa14.52□□□□□ -0.09
SOD1-202ENST00000389995 FEZ1Q99689 392 aa14.52□□□□□ -0.09
SOD1-202ENST00000389995 RABGAP1Q9Y3P9 1069 aa14.52□□□□□ -0.09
SOD1-202ENST00000389995 TRIM43BA6NCK2 446 aa14.51□□□□□ -0.09
SOD1-202ENST00000389995 SLC15A5A6NIM6 579 aa14.51□□□□□ -0.09
SOD1-202ENST00000389995 USP17L15C9J2P7 530 aa14.51□□□□□ -0.09
SOD1-202ENST00000389995 USP17L13C9JLJ4 530 aa14.51□□□□□ -0.09
SOD1-202ENST00000389995 USP17L11C9JVI0 530 aa14.51□□□□□ -0.09
SOD1-202ENST00000389995 USP17L18D6R9N7 530 aa14.51□□□□□ -0.09
SOD1-202ENST00000389995 USP17L22D6RA61 530 aa14.51□□□□□ -0.09
SOD1-202ENST00000389995 USP17L17D6RBQ6 530 aa14.51□□□□□ -0.09
SOD1-202ENST00000389995 USP17L19D6RCP7 530 aa14.51□□□□□ -0.09
SOD1-202ENST00000389995 USP17L20D6RJB6 530 aa14.51□□□□□ -0.09
SOD1-202ENST00000389995 SLFN5Q08AF3 891 aa14.51□□□□□ -0.09
SOD1-202ENST00000389995 USP17L24Q0WX57 530 aa14.51□□□□□ -0.09
SOD1-202ENST00000389995 ALDH1L2Q3SY69 923 aa14.51□□□□□ -0.09
SOD1-202ENST00000389995 ACER1Q8TDN7 264 aa14.51□□□□□ -0.09
SOD1-202ENST00000389995 GTF3C2Q8WUA4 911 aaPredicted RBP14.51□□□□□ -0.09
SOD1-202ENST00000389995 TRIM43Q96BQ3 446 aaPredicted RBP14.51□□□□□ -0.09
SOD1-202ENST00000389995 PARP14Q460N5 1801 aa14.5□□□□□ -0.09
SOD1-202ENST00000389995 ZNF236Q9UL36 1845 aa14.5□□□□□ -0.09
SOD1-202ENST00000389995 ZNF316A6NFI3 1004 aaPredicted RBP14.5□□□□□ -0.09
SOD1-202ENST00000389995 E9PSI1 815 aa14.5□□□□□ -0.09
SOD1-202ENST00000389995 GLRX3O76003 335 aaKnown RBP14.5□□□□□ -0.09
SOD1-202ENST00000389995 BAG3O95817 575 aa14.5□□□□□ -0.09
SOD1-202ENST00000389995 CYBAP13498 195 aa14.5□□□□□ -0.09
SOD1-202ENST00000389995 CCNA1P78396 465 aa14.5□□□□□ -0.09
SOD1-202ENST00000389995 GRB14Q14449 540 aa14.5□□□□□ -0.09
SOD1-202ENST00000389995 PRAMEF19Q5SWL8 479 aa14.5□□□□□ -0.09
SOD1-202ENST00000389995 CATSPERGQ6ZRH7 1159 aa14.5□□□□□ -0.09
SOD1-202ENST00000389995 USP38Q8NB14 1042 aa14.5□□□□□ -0.09
SOD1-202ENST00000389995 PDLIM7Q9NR12 457 aa14.5□□□□□ -0.09
SOD1-202ENST00000389995 IVNS1ABPQ9Y6Y0 642 aa14.5□□□□□ -0.09
SOD1-202ENST00000389995 TCF20Q9UGU0 1960 aaKnown RBP14.5□□□□□ -0.09
SOD1-202ENST00000389995 GBF1Q92538 1859 aa14.5□□□□□ -0.09
SOD1-202ENST00000389995 MSCO60682 206 aa14.49□□□□□ -0.09
SOD1-202ENST00000389995 VCAM1P19320 739 aa14.49□□□□□ -0.09
SOD1-202ENST00000389995 ITGB8P26012 769 aa14.49□□□□□ -0.09
SOD1-202ENST00000389995 ADCYAP1R1P41586 468 aa14.49□□□□□ -0.09
SOD1-202ENST00000389995 EPHB4P54760 987 aa14.49□□□□□ -0.09
SOD1-202ENST00000389995 PPP4CP60510 307 aa14.49□□□□□ -0.09
SOD1-202ENST00000389995 RAB3GAP1Q15042 981 aa14.49□□□□□ -0.09
SOD1-202ENST00000389995 CHD7Q9P2D1 2997 aa14.49□□□□□ -0.09
SOD1-202ENST00000389995 NAV1Q8NEY1 1877 aa14.48□□□□□ -0.09
SOD1-202ENST00000389995 SPDYE16A6NNV3 312 aaPredicted RBP14.48□□□□□ -0.09
SOD1-202ENST00000389995 KBTBD13C9JR72 458 aa14.48□□□□□ -0.09
SOD1-202ENST00000389995 IGHA2P01877 340 aa14.48□□□□□ -0.09
SOD1-202ENST00000389995 CYP2E1P05181 493 aaPredicted RBP14.48□□□□□ -0.09
SOD1-202ENST00000389995 HOXC6P09630 235 aa14.48□□□□□ -0.09
SOD1-202ENST00000389995 PLCG2P16885 1265 aa14.48□□□□□ -0.09
SOD1-202ENST00000389995 COL9A1P20849 921 aa14.48□□□□□ -0.09
SOD1-202ENST00000389995 SMAD3P84022 425 aaKnown RBP14.48□□□□□ -0.09
SOD1-202ENST00000389995 DPP9Q86TI2 863 aa14.48□□□□□ -0.09
SOD1-202ENST00000389995 ARRDC4Q8NCT1 418 aa14.48□□□□□ -0.09
SOD1-202ENST00000389995 C12orf42Q96LP6 360 aa14.48□□□□□ -0.09
SOD1-202ENST00000389995 PIH1D3Q9NQM4 214 aaKnown RBP14.48□□□□□ -0.09
SOD1-202ENST00000389995 A0A0G2JMZ2 1700 aa14.48□□□□□ -0.09
SOD1-202ENST00000389995 PNMA6EA0A0J9YXQ4 647 aa14.47□□□□□ -0.09
SOD1-202ENST00000389995 HLA-DOAP06340 250 aa14.47□□□□□ -0.09
SOD1-202ENST00000389995 UQCRFS1P1P0C7P4 283 aa14.47□□□□□ -0.09
SOD1-202ENST00000389995 ADORA2AP29274 412 aa14.47□□□□□ -0.09
SOD1-202ENST00000389995 GRIN2CQ14957 1233 aa14.47□□□□□ -0.09
SOD1-202ENST00000389995 TTC39AQ5SRH9 613 aa14.47□□□□□ -0.09
SOD1-202ENST00000389995 MIGA1Q8NAN2 632 aa14.47□□□□□ -0.09
SOD1-202ENST00000389995 DBNDD2Q9BQY9 259 aa14.47□□□□□ -0.09
SOD1-202ENST00000389995 API5Q9BZZ5 524 aaKnown RBP14.47□□□□□ -0.09
SOD1-202ENST00000389995 RPAP3Q9H6T3 665 aaPredicted RBP14.47□□□□□ -0.09
SOD1-202ENST00000389995 GINM1Q9NU53 330 aa14.47□□□□□ -0.09
SOD1-202ENST00000389995 HDAC5Q9UQL6 1122 aa14.47□□□□□ -0.09
SOD1-202ENST00000389995 XIRP2A4UGR9 3374 aa14.46□□□□□ -0.09
SOD1-202ENST00000389995 MCM3APO60318 1980 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms