RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 ZNF287Q9HBT7 754 aa14.71□□□□□ -0.05
TRAPPC9-201ENST00000389328 JAG2Q9Y219 1238 aa14.71□□□□□ -0.05
TRAPPC9-201ENST00000389328 GSTTP1A0A1W2PQM5 241 aa14.71□□□□□ -0.05
TRAPPC9-201ENST00000389328 ZPR1O75312 459 aa14.71□□□□□ -0.05
TRAPPC9-201ENST00000389328 ANKRD13CQ8N6S4 541 aa14.71□□□□□ -0.05
TRAPPC9-201ENST00000389328 CAPS2Q9BXY5 557 aa14.71□□□□□ -0.05
TRAPPC9-201ENST00000389328 IFIH1Q9BYX4 1025 aaKnown RBP14.71□□□□□ -0.05
TRAPPC9-201ENST00000389328 PDE6AP16499 860 aa14.71□□□□□ -0.06
TRAPPC9-201ENST00000389328 GUCY2FP51841 1108 aa14.71□□□□□ -0.06
TRAPPC9-201ENST00000389328 KCTD16Q68DU8 428 aa14.71□□□□□ -0.06
TRAPPC9-201ENST00000389328 C2CD5Q86YS7 1000 aa14.71□□□□□ -0.06
TRAPPC9-201ENST00000389328 KLHL7Q8IXQ5 586 aa14.71□□□□□ -0.06
TRAPPC9-201ENST00000389328 FANCBQ8NB91 859 aa14.71□□□□□ -0.06
TRAPPC9-201ENST00000389328 TMEM2Q9UHN6 1383 aa14.71□□□□□ -0.06
TRAPPC9-201ENST00000389328 MPHOSPH10O00566 681 aaKnown RBP14.7□□□□□ -0.06
TRAPPC9-201ENST00000389328 TRIM66O15016 1216 aa14.7□□□□□ -0.06
TRAPPC9-201ENST00000389328 TSPY3P0CV98 308 aa14.7□□□□□ -0.06
TRAPPC9-201ENST00000389328 TSPY8P0CW00 308 aa14.7□□□□□ -0.06
TRAPPC9-201ENST00000389328 ERCC5P28715 1186 aaPredicted RBP14.7□□□□□ -0.06
TRAPPC9-201ENST00000389328 SSR1P43307 286 aaKnown RBP14.7□□□□□ -0.06
TRAPPC9-201ENST00000389328 KIAA0753Q2KHM9 967 aa14.7□□□□□ -0.06
TRAPPC9-201ENST00000389328 CCDC152Q4G0S7 254 aa14.7□□□□□ -0.06
TRAPPC9-201ENST00000389328 JRKLQ9Y4A0 524 aa14.7□□□□□ -0.06
TRAPPC9-201ENST00000389328 GOLGA6L10A0A0M3HER8 536 aa14.7□□□□□ -0.06
TRAPPC9-201ENST00000389328 GCOM1H8Y6P7 765 aaPredicted RBP14.7□□□□□ -0.06
TRAPPC9-201ENST00000389328 MYZAPP0CAP1 466 aa14.7□□□□□ -0.06
TRAPPC9-201ENST00000389328 COPB1P53618 953 aaKnown RBP14.7□□□□□ -0.06
TRAPPC9-201ENST00000389328 MTF1Q14872 753 aa14.7□□□□□ -0.06
TRAPPC9-201ENST00000389328 IFNL3Q8IZI9 196 aa14.7□□□□□ -0.06
TRAPPC9-201ENST00000389328 SAMM50Q9Y512 469 aa14.7□□□□□ -0.06
TRAPPC9-201ENST00000389328 SALL3Q9BXA9 1300 aa14.7□□□□□ -0.06
TRAPPC9-201ENST00000389328 CEP152O94986 1710 aa14.7□□□□□ -0.06
TRAPPC9-201ENST00000389328 SETBP1Q9Y6X0 1596 aa14.7□□□□□ -0.06
TRAPPC9-201ENST00000389328 CASP1P29466 404 aa14.7□□□□□ -0.06
TRAPPC9-201ENST00000389328 TNNC1P63316 161 aa14.7□□□□□ -0.06
TRAPPC9-201ENST00000389328 MCM9Q9NXL9 1143 aa14.7□□□□□ -0.06
TRAPPC9-201ENST00000389328 ADGRB3O60242 1522 aa14.7□□□□□ -0.06
TRAPPC9-201ENST00000389328 FOXN1O15353 648 aa14.7□□□□□ -0.06
TRAPPC9-201ENST00000389328 RAPGEF1Q13905 1077 aa14.7□□□□□ -0.06
TRAPPC9-201ENST00000389328 IFT20Q8IY31 132 aa14.7□□□□□ -0.06
TRAPPC9-201ENST00000389328 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.7□□□□□ -0.06
TRAPPC9-201ENST00000389328 PCDHB6Q9Y5E3 794 aa14.7□□□□□ -0.06
TRAPPC9-201ENST00000389328 IFI16Q16666 785 aaKnown RBP14.69□□□□□ -0.06
TRAPPC9-201ENST00000389328 RPGRIP1Q96KN7 1286 aa14.69□□□□□ -0.06
TRAPPC9-201ENST00000389328 PPANQ9NQ55 473 aaKnown RBP14.69□□□□□ -0.06
TRAPPC9-201ENST00000389328 RBM28Q9NW13 759 aaKnown RBP14.69□□□□□ -0.06
TRAPPC9-201ENST00000389328 ANKIB1Q9P2G1 1089 aa14.69□□□□□ -0.06
TRAPPC9-201ENST00000389328 MAP2K2P36507 400 aa14.69□□□□□ -0.06
TRAPPC9-201ENST00000389328 CTNNBL1Q8WYA6 563 aaPredicted RBP14.69□□□□□ -0.06
TRAPPC9-201ENST00000389328 BPIFA3Q9BQP9 254 aa14.69□□□□□ -0.06
TRAPPC9-201ENST00000389328 TRAF5O00463 557 aa14.69□□□□□ -0.06
TRAPPC9-201ENST00000389328 PTGDRQ13258 359 aa14.69□□□□□ -0.06
TRAPPC9-201ENST00000389328 E7EVH7 732 aa14.68□□□□□ -0.06
TRAPPC9-201ENST00000389328 MRPS25P82663 173 aaKnown RBP14.68□□□□□ -0.06
TRAPPC9-201ENST00000389328 PUM3Q15397 648 aaKnown RBP14.68□□□□□ -0.06
TRAPPC9-201ENST00000389328 NBPF14Q5TI25 921 aa14.68□□□□□ -0.06
TRAPPC9-201ENST00000389328 EPSTI1Q96J88 318 aa14.68□□□□□ -0.06
TRAPPC9-201ENST00000389328 NOX5Q96PH1 765 aa14.68□□□□□ -0.06
TRAPPC9-201ENST00000389328 NUP58Q9BVL2 599 aa14.68□□□□□ -0.06
TRAPPC9-201ENST00000389328 KIF28PB7ZC32 967 aa14.68□□□□□ -0.06
TRAPPC9-201ENST00000389328 RRAGAQ7L523 313 aa14.68□□□□□ -0.06
TRAPPC9-201ENST00000389328 SPATA5Q8NB90 893 aa14.68□□□□□ -0.06
TRAPPC9-201ENST00000389328 TRIM31Q9BZY9 425 aa14.68□□□□□ -0.06
TRAPPC9-201ENST00000389328 NLRC4Q9NPP4 1024 aa14.68□□□□□ -0.06
TRAPPC9-201ENST00000389328 ANKRD62A6NC57 917 aa14.68□□□□□ -0.06
TRAPPC9-201ENST00000389328 TSGA10IPQ3SY00 556 aa14.68□□□□□ -0.06
TRAPPC9-201ENST00000389328 CABS1Q96KC9 395 aa14.68□□□□□ -0.06
TRAPPC9-201ENST00000389328 NUTM2BA6NNL0 878 aaPredicted RBP14.68□□□□□ -0.06
TRAPPC9-201ENST00000389328 NUTM2EB1AL46 878 aaPredicted RBP14.68□□□□□ -0.06
TRAPPC9-201ENST00000389328 TEX33O43247 280 aa14.68□□□□□ -0.06
TRAPPC9-201ENST00000389328 CDC25AP30304 524 aa14.68□□□□□ -0.06
TRAPPC9-201ENST00000389328 GNAQP50148 359 aa14.68□□□□□ -0.06
TRAPPC9-201ENST00000389328 ZCCHC11Q5TAX3 1644 aaKnown RBP14.68□□□□□ -0.06
TRAPPC9-201ENST00000389328 DZIP3Q86Y13 1208 aaKnown RBP14.68□□□□□ -0.06
TRAPPC9-201ENST00000389328 ALDH8A1Q9H2A2 487 aaPredicted RBP14.68□□□□□ -0.06
TRAPPC9-201ENST00000389328 MLH3Q9UHC1 1453 aa14.68□□□□□ -0.06
TRAPPC9-201ENST00000389328 KRT13P13646 458 aa14.67□□□□□ -0.06
TRAPPC9-201ENST00000389328 NAA25Q14CX7 972 aa14.67□□□□□ -0.06
TRAPPC9-201ENST00000389328 MRFAP1Q9Y605 127 aa14.67□□□□□ -0.06
TRAPPC9-201ENST00000389328 PHKG2P15735 406 aa14.67□□□□□ -0.06
TRAPPC9-201ENST00000389328 ZNF652Q9Y2D9 606 aa14.67□□□□□ -0.06
TRAPPC9-201ENST00000389328 DYMQ7RTS9 669 aa14.67□□□□□ -0.06
TRAPPC9-201ENST00000389328 TRMT1LQ7Z2T5 733 aaKnown RBP14.67□□□□□ -0.06
TRAPPC9-201ENST00000389328 ZSCAN29Q8IWY8 852 aaPredicted RBP14.67□□□□□ -0.06
TRAPPC9-201ENST00000389328 ANKS4BQ8N8V4 417 aa14.67□□□□□ -0.06
TRAPPC9-201ENST00000389328 SDR42E1Q8WUS8 393 aa14.67□□□□□ -0.06
TRAPPC9-201ENST00000389328 GSDMAQ96QA5 445 aa14.67□□□□□ -0.06
TRAPPC9-201ENST00000389328 PANX2Q96RD6 677 aa14.67□□□□□ -0.06
TRAPPC9-201ENST00000389328 INCENPQ9NQS7 918 aa14.67□□□□□ -0.06
TRAPPC9-201ENST00000389328 CTDP1Q9Y5B0 961 aaPredicted RBP14.67□□□□□ -0.06
TRAPPC9-201ENST00000389328 FAM170AA1A519 330 aa14.66□□□□□ -0.06
TRAPPC9-201ENST00000389328 BUB1O43683 1085 aa14.66□□□□□ -0.06
TRAPPC9-201ENST00000389328 ARHGAP25P42331 645 aa14.66□□□□□ -0.06
TRAPPC9-201ENST00000389328 UBE4AQ14139 1066 aa14.66□□□□□ -0.06
TRAPPC9-201ENST00000389328 PTPROQ16827 1216 aa14.66□□□□□ -0.06
TRAPPC9-201ENST00000389328 RESP18Q5W5W9 173 aa14.66□□□□□ -0.06
TRAPPC9-201ENST00000389328 KRT79Q5XKE5 535 aa14.66□□□□□ -0.06
TRAPPC9-201ENST00000389328 SHC4Q6S5L8 630 aa14.66□□□□□ -0.06
TRAPPC9-201ENST00000389328 USP42Q9H9J4 1324 aaKnown RBP14.66□□□□□ -0.06
TRAPPC9-201ENST00000389328 EIF3CLB5ME19 914 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms