RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 CHD4Q14839 1912 aa13.36□□□□□ -0.27
RAPGEF3-201ENST00000389212 STK36Q9NRP7 1315 aa13.36□□□□□ -0.27
RAPGEF3-201ENST00000389212 LRP5O75197 1615 aa13.35□□□□□ -0.27
RAPGEF3-201ENST00000389212 FAM47AQ5JRC9 791 aa13.35□□□□□ -0.27
RAPGEF3-201ENST00000389212 WASF1Q92558 559 aa13.35□□□□□ -0.27
RAPGEF3-201ENST00000389212 DNAJC5Q9H3Z4 198 aa13.35□□□□□ -0.27
RAPGEF3-201ENST00000389212 YY1AP1Q9H869 796 aa13.35□□□□□ -0.27
RAPGEF3-201ENST00000389212 IMPACTQ9P2X3 320 aa13.35□□□□□ -0.27
RAPGEF3-201ENST00000389212 AKAP17AQ02040 695 aaKnown RBP13.35□□□□□ -0.27
RAPGEF3-201ENST00000389212 POSTNQ15063 836 aa13.35□□□□□ -0.27
RAPGEF3-201ENST00000389212 DHX58Q96C10 678 aa13.35□□□□□ -0.27
RAPGEF3-201ENST00000389212 EPSTI1Q96J88 318 aa13.35□□□□□ -0.27
RAPGEF3-201ENST00000389212 CDC5LQ99459 802 aaKnown RBP13.35□□□□□ -0.27
RAPGEF3-201ENST00000389212 INTS13Q9NVM9 706 aa13.35□□□□□ -0.27
RAPGEF3-201ENST00000389212 SPATA31A1Q5TZJ5 1347 aa13.35□□□□□ -0.27
RAPGEF3-201ENST00000389212 IKBKBO14920 756 aa13.35□□□□□ -0.27
RAPGEF3-201ENST00000389212 CYP2D6P10635 497 aa13.35□□□□□ -0.27
RAPGEF3-201ENST00000389212 PTPREP23469 700 aa13.35□□□□□ -0.27
RAPGEF3-201ENST00000389212 ELF2Q15723 593 aa13.35□□□□□ -0.27
RAPGEF3-201ENST00000389212 KLHL10Q6JEL2 608 aa13.35□□□□□ -0.27
RAPGEF3-201ENST00000389212 HOMER1Q86YM7 354 aa13.35□□□□□ -0.27
RAPGEF3-201ENST00000389212 CCDC150Q8NCX0 1101 aa13.35□□□□□ -0.27
RAPGEF3-201ENST00000389212 CNKSR2Q8WXI2 1034 aa13.35□□□□□ -0.27
RAPGEF3-201ENST00000389212 ESR2Q92731 530 aa13.35□□□□□ -0.27
RAPGEF3-201ENST00000389212 AK7Q96M32 723 aa13.35□□□□□ -0.27
RAPGEF3-201ENST00000389212 RIOK1Q9BRS2 568 aaKnown RBP13.35□□□□□ -0.27
RAPGEF3-201ENST00000389212 RNF41Q9H4P4 317 aaPredicted RBP13.35□□□□□ -0.27
RAPGEF3-201ENST00000389212 AATFQ9NY61 560 aaKnown RBP eCLIP13.35□□□□□ -0.27
RAPGEF3-201ENST00000389212 USP17L12C9JPN9 530 aa13.34□□□□□ -0.27
RAPGEF3-201ENST00000389212 USP17L21D6R901 530 aa13.34□□□□□ -0.27
RAPGEF3-201ENST00000389212 VEGFAP15692 232 aaPredicted RBP13.34□□□□□ -0.27
RAPGEF3-201ENST00000389212 SEC23AQ15436 765 aa13.34□□□□□ -0.27
RAPGEF3-201ENST00000389212 KIF18AQ8NI77 898 aa13.34□□□□□ -0.27
RAPGEF3-201ENST00000389212 SRP68Q9UHB9 627 aaKnown RBP13.34□□□□□ -0.27
RAPGEF3-201ENST00000389212 MINPP1Q9UNW1 487 aa13.34□□□□□ -0.27
RAPGEF3-201ENST00000389212 MTMR7Q9Y216 660 aa13.34□□□□□ -0.27
RAPGEF3-201ENST00000389212 BAZ2AQ9UIF9 1905 aaKnown RBP13.34□□□□□ -0.27
RAPGEF3-201ENST00000389212 MYH2Q9UKX2 1941 aa13.34□□□□□ -0.27
RAPGEF3-201ENST00000389212 A0A087X0B3 334 aa13.34□□□□□ -0.27
RAPGEF3-201ENST00000389212 CCDC172P0C7W6 258 aa13.34□□□□□ -0.27
RAPGEF3-201ENST00000389212 STX17P56962 302 aa13.34□□□□□ -0.27
RAPGEF3-201ENST00000389212 MDM2Q00987 491 aaPredicted RBP13.34□□□□□ -0.27
RAPGEF3-201ENST00000389212 IFIT1BQ5T764 474 aaKnown RBP13.34□□□□□ -0.27
RAPGEF3-201ENST00000389212 LINC00116Q8NCU8 138 aa13.34□□□□□ -0.27
RAPGEF3-201ENST00000389212 FAM84BQ96KN1 310 aaPredicted RBP13.34□□□□□ -0.27
RAPGEF3-201ENST00000389212 NFE2L3Q9Y4A8 694 aa13.34□□□□□ -0.27
RAPGEF3-201ENST00000389212 ADAMTS3O15072 1205 aa13.33□□□□□ -0.27
RAPGEF3-201ENST00000389212 TOP1P11387 765 aaKnown RBP13.33□□□□□ -0.27
RAPGEF3-201ENST00000389212 ZNF174Q15697 407 aa13.33□□□□□ -0.27
RAPGEF3-201ENST00000389212 PKN1Q16512 942 aa13.33□□□□□ -0.27
RAPGEF3-201ENST00000389212 RILPL1Q5EBL4 403 aa13.33□□□□□ -0.27
RAPGEF3-201ENST00000389212 SMYD4Q8IYR2 804 aaPredicted RBP13.33□□□□□ -0.27
RAPGEF3-201ENST00000389212 ZSCAN10Q96SZ4 725 aaPredicted RBP13.33□□□□□ -0.27
RAPGEF3-201ENST00000389212 SAMSN1Q9NSI8 373 aaKnown RBP13.33□□□□□ -0.27
RAPGEF3-201ENST00000389212 FAM182BQ5T319 152 aa13.33□□□□□ -0.28
RAPGEF3-201ENST00000389212 TBC1D9BQ66K14 1250 aa13.33□□□□□ -0.28
RAPGEF3-201ENST00000389212 FOXP1Q9H334 677 aaPredicted RBP13.33□□□□□ -0.28
RAPGEF3-201ENST00000389212 FAM237AA0A1B0GTK4 181 aa13.33□□□□□ -0.28
RAPGEF3-201ENST00000389212 CCDC196A0A1B0GTZ2 297 aa13.33□□□□□ -0.28
RAPGEF3-201ENST00000389212 CAVIN4Q5BKX8 364 aa13.33□□□□□ -0.28
RAPGEF3-201ENST00000389212 MED15Q96RN5 788 aa13.33□□□□□ -0.28
RAPGEF3-201ENST00000389212 GNL3LQ9NVN8 582 aaKnown RBP13.33□□□□□ -0.28
RAPGEF3-201ENST00000389212 JRKLQ9Y4A0 524 aa13.33□□□□□ -0.28
RAPGEF3-201ENST00000389212 MYO1CO00159 1063 aa13.32□□□□□ -0.28
RAPGEF3-201ENST00000389212 PRDX5P30044 214 aa13.32□□□□□ -0.28
RAPGEF3-201ENST00000389212 ADKP55263 362 aaKnown RBP13.32□□□□□ -0.28
RAPGEF3-201ENST00000389212 SMARCE1Q969G3 411 aa13.32□□□□□ -0.28
RAPGEF3-201ENST00000389212 DNAI1Q9UI46 699 aa13.32□□□□□ -0.28
RAPGEF3-201ENST00000389212 COL14A1Q05707 1796 aaKnown RBP13.32□□□□□ -0.28
RAPGEF3-201ENST00000389212 DOCK2Q92608 1830 aa13.32□□□□□ -0.28
RAPGEF3-201ENST00000389212 CASQ1P31415 396 aa13.32□□□□□ -0.28
RAPGEF3-201ENST00000389212 FAM98CQ17RN3 349 aaKnown RBP13.32□□□□□ -0.28
RAPGEF3-201ENST00000389212 CTR9Q6PD62 1173 aa13.32□□□□□ -0.28
RAPGEF3-201ENST00000389212 COL16A1Q07092 1604 aaPredicted RBP13.32□□□□□ -0.28
RAPGEF3-201ENST00000389212 CICQ96RK0 1608 aaPredicted RBP13.32□□□□□ -0.28
RAPGEF3-201ENST00000389212 VSTM4Q8IW00 320 aa13.31□□□□□ -0.28
RAPGEF3-201ENST00000389212 ARAP2Q8WZ64 1704 aa13.31□□□□□ -0.28
RAPGEF3-201ENST00000389212 ACTN4O43707 911 aaKnown RBP13.31□□□□□ -0.28
RAPGEF3-201ENST00000389212 CATIPQ7Z7H3 387 aa13.31□□□□□ -0.28
RAPGEF3-201ENST00000389212 TXNRD3Q86VQ6 643 aa13.31□□□□□ -0.28
RAPGEF3-201ENST00000389212 TMTC2Q8N394 836 aa13.31□□□□□ -0.28
RAPGEF3-201ENST00000389212 ZNF652Q9Y2D9 606 aa13.31□□□□□ -0.28
RAPGEF3-201ENST00000389212 ZNF804BA4D1E1 1349 aa13.31□□□□□ -0.28
RAPGEF3-201ENST00000389212 BCL9LQ86UU0 1499 aa13.31□□□□□ -0.28
RAPGEF3-201ENST00000389212 TRIM75PA6NK02 468 aa13.31□□□□□ -0.28
RAPGEF3-201ENST00000389212 MECOMQ03112 1051 aa13.31□□□□□ -0.28
RAPGEF3-201ENST00000389212 SRPRBQ9Y5M8 271 aaKnown RBP13.31□□□□□ -0.28
RAPGEF3-201ENST00000389212 FANCGO15287 622 aa13.3□□□□□ -0.28
RAPGEF3-201ENST00000389212 ERCC6LQ2NKX8 1250 aa13.3□□□□□ -0.28
RAPGEF3-201ENST00000389212 SYMPKQ92797 1274 aaKnown RBP13.3□□□□□ -0.28
RAPGEF3-201ENST00000389212 VWA3AA6NCI4 1184 aa13.3□□□□□ -0.28
RAPGEF3-201ENST00000389212 ANKRD65E5RJM6 399 aa13.3□□□□□ -0.28
RAPGEF3-201ENST00000389212 CBFA2T2O43439 604 aa13.3□□□□□ -0.28
RAPGEF3-201ENST00000389212 IBSPP21815 317 aaPredicted RBP13.3□□□□□ -0.28
RAPGEF3-201ENST00000389212 KRT2P35908 639 aa13.3□□□□□ -0.28
RAPGEF3-201ENST00000389212 FUT2Q10981 343 aa13.3□□□□□ -0.28
RAPGEF3-201ENST00000389212 KMT5BQ4FZB7 885 aa13.3□□□□□ -0.28
RAPGEF3-201ENST00000389212 IQCA1Q86XH1 822 aa13.3□□□□□ -0.28
RAPGEF3-201ENST00000389212 RNF26Q9BY78 433 aaPredicted RBP13.3□□□□□ -0.28
RAPGEF3-201ENST00000389212 NRDCO43847 1150 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms