RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 EIF4BP23588 611 aaKnown RBP6.89□□□□□ -1.31
ERCC4-202ENST00000389138 SOX9P48436 509 aa6.89□□□□□ -1.31
ERCC4-202ENST00000389138 PIN1Q13526 163 aaPredicted RBP6.89□□□□□ -1.31
ERCC4-202ENST00000389138 SETDB1Q15047 1291 aa6.89□□□□□ -1.31
ERCC4-202ENST00000389138 TAF1CQ15572 869 aaPredicted RBP6.89□□□□□ -1.31
ERCC4-202ENST00000389138 DUSP27Q5VZP5 1158 aa6.89□□□□□ -1.31
ERCC4-202ENST00000389138 NXNQ6DKJ4 435 aa6.89□□□□□ -1.31
ERCC4-202ENST00000389138 PI16Q6UXB8 463 aa6.89□□□□□ -1.31
ERCC4-202ENST00000389138 FAM169BQ8N8A8 192 aa6.89□□□□□ -1.31
ERCC4-202ENST00000389138 PTCH2Q9Y6C5 1203 aa6.89□□□□□ -1.31
ERCC4-202ENST00000389138 DISP2A7MBM2 1401 aa6.89□□□□□ -1.31
ERCC4-202ENST00000389138 RHOBTB3O94955 611 aa6.89□□□□□ -1.31
ERCC4-202ENST00000389138 TRIM27P14373 513 aa6.89□□□□□ -1.31
ERCC4-202ENST00000389138 SMCPP49901 116 aaPredicted RBP6.89□□□□□ -1.31
ERCC4-202ENST00000389138 OXLD1Q5BKU9 147 aa6.89□□□□□ -1.31
ERCC4-202ENST00000389138 CFAP161Q6P656 301 aa6.89□□□□□ -1.31
ERCC4-202ENST00000389138 OTUD6BQ8N6M0 293 aa6.89□□□□□ -1.31
ERCC4-202ENST00000389138 L3MBTL2Q969R5 705 aa6.89□□□□□ -1.31
ERCC4-202ENST00000389138 EAF1Q96JC9 268 aaPredicted RBP6.89□□□□□ -1.31
ERCC4-202ENST00000389138 MYCBPQ99417 103 aaPredicted RBP6.89□□□□□ -1.31
ERCC4-202ENST00000389138 KMT5AQ9NQR1 393 aa6.89□□□□□ -1.31
ERCC4-202ENST00000389138 SAGE1Q9NXZ1 904 aa6.89□□□□□ -1.31
ERCC4-202ENST00000389138 PLAAQ9Y263 795 aa6.89□□□□□ -1.31
ERCC4-202ENST00000389138 A0A1W2PRQ8 180 aa6.88□□□□□ -1.31
ERCC4-202ENST00000389138 VSTM5A8MXK1 200 aa6.88□□□□□ -1.31
ERCC4-202ENST00000389138 FIBPO43427 364 aa6.88□□□□□ -1.31
ERCC4-202ENST00000389138 DIAPH1O60610 1272 aaKnown RBP6.88□□□□□ -1.31
ERCC4-202ENST00000389138 ENAHQ8N8S7 591 aaPredicted RBP6.88□□□□□ -1.31
ERCC4-202ENST00000389138 HPS1Q92902 700 aa6.88□□□□□ -1.31
ERCC4-202ENST00000389138 HOOK2Q96ED9 719 aa6.88□□□□□ -1.31
ERCC4-202ENST00000389138 CAAP1Q9H8G2 361 aa6.88□□□□□ -1.31
ERCC4-202ENST00000389138 RBM19Q9Y4C8 960 aaKnown RBP6.88□□□□□ -1.31
ERCC4-202ENST00000389138 ROCK1Q13464 1354 aa6.88□□□□□ -1.31
ERCC4-202ENST00000389138 PDE8AO60658 829 aa6.88□□□□□ -1.31
ERCC4-202ENST00000389138 MTA2O94776 668 aa6.88□□□□□ -1.31
ERCC4-202ENST00000389138 NR3C2P08235 984 aa6.88□□□□□ -1.31
ERCC4-202ENST00000389138 IFRD2Q12894 506 aaPredicted RBP6.88□□□□□ -1.31
ERCC4-202ENST00000389138 DDR2Q16832 855 aa6.88□□□□□ -1.31
ERCC4-202ENST00000389138 PPP1R26Q5T8A7 1209 aaPredicted RBP6.88□□□□□ -1.31
ERCC4-202ENST00000389138 SPATC1Q76KD6 591 aa6.88□□□□□ -1.31
ERCC4-202ENST00000389138 KIAA0825Q8IV33 1275 aa6.88□□□□□ -1.31
ERCC4-202ENST00000389138 UNC5CLQ8IV45 518 aa6.88□□□□□ -1.31
ERCC4-202ENST00000389138 CRIPAKQ8N1N5 446 aa6.88□□□□□ -1.31
ERCC4-202ENST00000389138 AFAP1L2Q8N4X5 818 aa6.88□□□□□ -1.31
ERCC4-202ENST00000389138 TTC14Q96N46 770 aa6.88□□□□□ -1.31
ERCC4-202ENST00000389138 C2orf49Q9BVC5 232 aaPredicted RBP6.88□□□□□ -1.31
ERCC4-202ENST00000389138 FEZ2Q9UHY8 353 aaPredicted RBP6.88□□□□□ -1.31
ERCC4-202ENST00000389138 MCM8Q9UJA3 840 aa6.88□□□□□ -1.31
ERCC4-202ENST00000389138 ERVH48-1M5A8F1 160 aa6.87□□□□□ -1.31
ERCC4-202ENST00000389138 SMAD7O15105 426 aaKnown RBP6.87□□□□□ -1.31
ERCC4-202ENST00000389138 TNFRSF21O75509 655 aa6.87□□□□□ -1.31
ERCC4-202ENST00000389138 RPN1P04843 607 aaKnown RBP6.87□□□□□ -1.31
ERCC4-202ENST00000389138 TNFAIP3P21580 790 aa6.87□□□□□ -1.31
ERCC4-202ENST00000389138 CLK1P49759 484 aaKnown RBP6.87□□□□□ -1.31
ERCC4-202ENST00000389138 RASGRF1Q13972 1273 aa6.87□□□□□ -1.31
ERCC4-202ENST00000389138 ESCO1Q5FWF5 840 aa6.87□□□□□ -1.31
ERCC4-202ENST00000389138 PPP4R3AQ6IN85 833 aa6.87□□□□□ -1.31
ERCC4-202ENST00000389138 GJD3Q8N144 294 aa6.87□□□□□ -1.31
ERCC4-202ENST00000389138 CHCHD4Q8N4Q1 142 aa6.87□□□□□ -1.31
ERCC4-202ENST00000389138 PJA1Q8NG27 643 aa6.87□□□□□ -1.31
ERCC4-202ENST00000389138 ATXN2LQ8WWM7 1075 aaKnown RBP6.87□□□□□ -1.31
ERCC4-202ENST00000389138 TMEM87BQ96K49 555 aa6.87□□□□□ -1.31
ERCC4-202ENST00000389138 OBP2AQ9NY56 170 aa6.87□□□□□ -1.31
ERCC4-202ENST00000389138 USP25Q9UHP3 1055 aa6.87□□□□□ -1.31
ERCC4-202ENST00000389138 FBXO2Q9UK22 296 aaPredicted RBP6.87□□□□□ -1.31
ERCC4-202ENST00000389138 NINLQ9Y2I6 1382 aa6.87□□□□□ -1.31
ERCC4-202ENST00000389138 RASSF10A6NK89 507 aa6.86□□□□□ -1.31
ERCC4-202ENST00000389138 ORC4O43929 436 aa6.86□□□□□ -1.31
ERCC4-202ENST00000389138 SNX2O60749 519 aa6.86□□□□□ -1.31
ERCC4-202ENST00000389138 HSPA5P11021 654 aaKnown RBP6.86□□□□□ -1.31
ERCC4-202ENST00000389138 LMNB1P20700 586 aa6.86□□□□□ -1.31
ERCC4-202ENST00000389138 GTF2E1P29083 439 aaPredicted RBP6.86□□□□□ -1.31
ERCC4-202ENST00000389138 TDO2P48775 406 aa6.86□□□□□ -1.31
ERCC4-202ENST00000389138 MMP14P50281 582 aa6.86□□□□□ -1.31
ERCC4-202ENST00000389138 WDR4P57081 412 aaKnown RBP6.86□□□□□ -1.31
ERCC4-202ENST00000389138 PURAQ00577 322 aaKnown RBP6.86□□□□□ -1.31
ERCC4-202ENST00000389138 SEPT6Q14141 434 aa6.86□□□□□ -1.31
ERCC4-202ENST00000389138 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.86□□□□□ -1.31
ERCC4-202ENST00000389138 KRT27Q7Z3Y8 459 aa6.86□□□□□ -1.31
ERCC4-202ENST00000389138 STRA8Q7Z7C7 330 aa6.86□□□□□ -1.31
ERCC4-202ENST00000389138 ZNF784Q8NCA9 323 aaPredicted RBP6.86□□□□□ -1.31
ERCC4-202ENST00000389138 THAP3Q8WTV1 239 aaPredicted RBP6.86□□□□□ -1.31
ERCC4-202ENST00000389138 SNRNP27Q8WVK2 155 aaKnown RBP6.86□□□□□ -1.31
ERCC4-202ENST00000389138 SARGQ9BW04 601 aa6.86□□□□□ -1.31
ERCC4-202ENST00000389138 KLF16Q9BXK1 252 aaPredicted RBP6.86□□□□□ -1.31
ERCC4-202ENST00000389138 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.86□□□□□ -1.31
ERCC4-202ENST00000389138 PCDHB11Q9Y5F2 797 aa6.86□□□□□ -1.31
ERCC4-202ENST00000389138 ADGRL2O95490 1459 aa6.86□□□□□ -1.31
ERCC4-202ENST00000389138 CDC42BPGQ6DT37 1551 aa6.86□□□□□ -1.31
ERCC4-202ENST00000389138 ZIC2O95409 532 aaPredicted RBP6.86□□□□□ -1.31
ERCC4-202ENST00000389138 AGR2O95994 175 aa6.86□□□□□ -1.31
ERCC4-202ENST00000389138 TSPAN7P41732 249 aa6.86□□□□□ -1.31
ERCC4-202ENST00000389138 RENBPP51606 427 aa6.86□□□□□ -1.31
ERCC4-202ENST00000389138 RAB15P59190 212 aa6.86□□□□□ -1.31
ERCC4-202ENST00000389138 CBX2Q14781 532 aaPredicted RBP6.86□□□□□ -1.31
ERCC4-202ENST00000389138 CT47A1Q5JQC4 288 aaPredicted RBP6.86□□□□□ -1.31
ERCC4-202ENST00000389138 AKAP4Q5JQC9 854 aa6.86□□□□□ -1.31
ERCC4-202ENST00000389138 C1orf53Q5VUE5 145 aa6.86□□□□□ -1.31
ERCC4-202ENST00000389138 USPL1Q5W0Q7 1092 aa6.86□□□□□ -1.31
ERCC4-202ENST00000389138 LHFPL2Q6ZUX7 228 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms