RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 DACH1Q9UI36 760 aa17.12■□□□□ 0.33
SCFD2-201ENST00000388940 V9GY48 417 aaPredicted RBP17.12■□□□□ 0.33
SCFD2-201ENST00000388940 FOXN1O15353 648 aa17.12■□□□□ 0.33
SCFD2-201ENST00000388940 ACTN4O43707 911 aaKnown RBP17.12■□□□□ 0.33
SCFD2-201ENST00000388940 PLEKHA8P1O95397 391 aa17.12■□□□□ 0.33
SCFD2-201ENST00000388940 MORC3Q14149 939 aa17.12■□□□□ 0.33
SCFD2-201ENST00000388940 ARPP21Q9UBL0 812 aaPredicted RBP17.12■□□□□ 0.33
SCFD2-201ENST00000388940 IRS2Q9Y4H2 1338 aa17.12■□□□□ 0.33
SCFD2-201ENST00000388940 ZPR1O75312 459 aa17.11■□□□□ 0.33
SCFD2-201ENST00000388940 SERPINC1P01008 464 aa17.11■□□□□ 0.33
SCFD2-201ENST00000388940 TUBB4AP04350 444 aa17.11■□□□□ 0.33
SCFD2-201ENST00000388940 TM4SF1P30408 202 aa17.11■□□□□ 0.33
SCFD2-201ENST00000388940 KCNQ4P56696 695 aa17.11■□□□□ 0.33
SCFD2-201ENST00000388940 CT47A1Q5JQC4 288 aaPredicted RBP17.11■□□□□ 0.33
SCFD2-201ENST00000388940 E4F1Q66K89 784 aaPredicted RBP17.11■□□□□ 0.33
SCFD2-201ENST00000388940 TNFRSF25Q93038 417 aa17.11■□□□□ 0.33
SCFD2-201ENST00000388940 SMARCE1Q969G3 411 aa17.11■□□□□ 0.33
SCFD2-201ENST00000388940 FERMT2Q96AC1 680 aa17.11■□□□□ 0.33
SCFD2-201ENST00000388940 CSRNP2Q9H175 543 aa17.11■□□□□ 0.33
SCFD2-201ENST00000388940 BRMS1Q9HCU9 246 aa17.11■□□□□ 0.33
SCFD2-201ENST00000388940 FANCLQ9NW38 375 aa17.11■□□□□ 0.33
SCFD2-201ENST00000388940 PRDM1O75626 825 aa17.11■□□□□ 0.33
SCFD2-201ENST00000388940 PDE4BQ07343 736 aa17.11■□□□□ 0.33
SCFD2-201ENST00000388940 VSTM4Q8IW00 320 aa17.11■□□□□ 0.33
SCFD2-201ENST00000388940 ENOX1Q8TC92 643 aaKnown RBP17.11■□□□□ 0.33
SCFD2-201ENST00000388940 CCDC34Q96HJ3 373 aa17.11■□□□□ 0.33
SCFD2-201ENST00000388940 CCDC94Q9BW85 323 aaPredicted RBP17.11■□□□□ 0.33
SCFD2-201ENST00000388940 SRP68Q9UHB9 627 aaKnown RBP17.11■□□□□ 0.33
SCFD2-201ENST00000388940 NHSQ6T4R5 1651 aa17.1■□□□□ 0.33
SCFD2-201ENST00000388940 SPTY2D1Q68D10 685 aaPredicted RBP17.1■□□□□ 0.33
SCFD2-201ENST00000388940 DPF2Q92785 391 aa17.1■□□□□ 0.33
SCFD2-201ENST00000388940 CNTNAP5Q8WYK1 1306 aa17.1■□□□□ 0.33
SCFD2-201ENST00000388940 NPY5RQ15761 445 aa17.09■□□□□ 0.33
SCFD2-201ENST00000388940 CTCFLQ8NI51 663 aaPredicted RBP17.09■□□□□ 0.33
SCFD2-201ENST00000388940 TMX1Q9H3N1 280 aa17.09■□□□□ 0.33
SCFD2-201ENST00000388940 TRMT1Q9NXH9 659 aaKnown RBP17.09■□□□□ 0.33
SCFD2-201ENST00000388940 TFCP2L1Q9NZI6 479 aa17.09■□□□□ 0.33
SCFD2-201ENST00000388940 TAF1LQ8IZX4 1826 aa17.09■□□□□ 0.33
SCFD2-201ENST00000388940 PRR29P0C7W0 189 aa17.09■□□□□ 0.33
SCFD2-201ENST00000388940 CFAP100Q494V2 611 aa17.09■□□□□ 0.33
SCFD2-201ENST00000388940 EARS2Q5JPH6 523 aaKnown RBP17.09■□□□□ 0.33
SCFD2-201ENST00000388940 CCP110O43303 1012 aa17.08■□□□□ 0.33
SCFD2-201ENST00000388940 ZNF18P17022 549 aa17.08■□□□□ 0.33
SCFD2-201ENST00000388940 ATP2B1P20020 1258 aa17.08■□□□□ 0.33
SCFD2-201ENST00000388940 PRDX5P30044 214 aa17.08■□□□□ 0.33
SCFD2-201ENST00000388940 SH3RF1Q7Z6J0 888 aa17.08■□□□□ 0.33
SCFD2-201ENST00000388940 SRBD1Q8N5C6 995 aaKnown RBP17.08■□□□□ 0.33
SCFD2-201ENST00000388940 KIF18AQ8NI77 898 aa17.08■□□□□ 0.33
SCFD2-201ENST00000388940 FAM205CA6NFA0 338 aa17.08■□□□□ 0.32
SCFD2-201ENST00000388940 GNPATO15228 680 aa17.08■□□□□ 0.32
SCFD2-201ENST00000388940 TOM1O60784 492 aa17.08■□□□□ 0.32
SCFD2-201ENST00000388940 ERCC5P28715 1186 aaPredicted RBP17.08■□□□□ 0.32
SCFD2-201ENST00000388940 NCBP1Q09161 790 aaKnown RBP17.08■□□□□ 0.32
SCFD2-201ENST00000388940 USP49Q70CQ1 688 aa17.08■□□□□ 0.32
SCFD2-201ENST00000388940 SMIM5Q71RC9 77 aa17.08■□□□□ 0.32
SCFD2-201ENST00000388940 PTF1AQ7RTS3 328 aa17.08■□□□□ 0.32
SCFD2-201ENST00000388940 PPP1R13BQ96KQ4 1090 aa17.08■□□□□ 0.32
SCFD2-201ENST00000388940 RTCBQ9Y3I0 505 aaKnown RBP17.08■□□□□ 0.32
SCFD2-201ENST00000388940 SLFN14P0C7P3 912 aa17.07■□□□□ 0.32
SCFD2-201ENST00000388940 TRAPPC10P48553 1259 aa17.07■□□□□ 0.32
SCFD2-201ENST00000388940 PDCL2Q8N4E4 241 aa17.07■□□□□ 0.32
SCFD2-201ENST00000388940 ZNF592Q92610 1267 aa17.07■□□□□ 0.32
SCFD2-201ENST00000388940 SBF2Q86WG5 1849 aa17.07■□□□□ 0.32
SCFD2-201ENST00000388940 LY75O60449 1722 aa17.07■□□□□ 0.32
SCFD2-201ENST00000388940 TOP1P11387 765 aaKnown RBP17.06■□□□□ 0.32
SCFD2-201ENST00000388940 ANKS1AQ92625 1134 aa17.06■□□□□ 0.32
SCFD2-201ENST00000388940 MKRN1Q9UHC7 482 aaKnown RBP17.06■□□□□ 0.32
SCFD2-201ENST00000388940 TNRC6CQ9HCJ0 1690 aaKnown RBP17.06■□□□□ 0.32
SCFD2-201ENST00000388940 hCG_1642624A0A1W2PR95 340 aa17.06■□□□□ 0.32
SCFD2-201ENST00000388940 SCG2P13521 617 aa17.06■□□□□ 0.32
SCFD2-201ENST00000388940 PLCD1P51178 756 aa17.06■□□□□ 0.32
SCFD2-201ENST00000388940 ATP2C1P98194 919 aaPredicted RBP17.06■□□□□ 0.32
SCFD2-201ENST00000388940 FMR1Q06787 632 aaKnown RBP eCLIP17.06■□□□□ 0.322e-6■■■■□ 22.7
SCFD2-201ENST00000388940 TBX2Q13207 712 aaPredicted RBP17.06■□□□□ 0.32
SCFD2-201ENST00000388940 PFKFB3Q16875 520 aaPredicted RBP17.06■□□□□ 0.32
SCFD2-201ENST00000388940 TTC38Q5R3I4 469 aa17.06■□□□□ 0.32
SCFD2-201ENST00000388940 TXNRD3Q86VQ6 643 aa17.06■□□□□ 0.32
SCFD2-201ENST00000388940 FCHSD1Q86WN1 690 aa17.06■□□□□ 0.32
SCFD2-201ENST00000388940 PDILTQ8N807 584 aa17.06■□□□□ 0.32
SCFD2-201ENST00000388940 ARHGEF1Q92888 912 aaKnown RBP17.06■□□□□ 0.32
SCFD2-201ENST00000388940 LEMD3Q9Y2U8 911 aa17.06■□□□□ 0.32
SCFD2-201ENST00000388940 NFE2L3Q9Y4A8 694 aa17.06■□□□□ 0.32
SCFD2-201ENST00000388940 THSD7AQ9UPZ6 1657 aa17.06■□□□□ 0.32
SCFD2-201ENST00000388940 KIF5BP33176 963 aa17.05■□□□□ 0.32
SCFD2-201ENST00000388940 EVX2Q03828 476 aa17.05■□□□□ 0.32
SCFD2-201ENST00000388940 FAM47AQ5JRC9 791 aa17.05■□□□□ 0.32
SCFD2-201ENST00000388940 RCSD1Q6JBY9 416 aa17.05■□□□□ 0.32
SCFD2-201ENST00000388940 DGKHQ86XP1 1220 aa17.05■□□□□ 0.32
SCFD2-201ENST00000388940 WDR66Q8TBY9 1149 aa17.05■□□□□ 0.32
SCFD2-201ENST00000388940 NGLY1Q96IV0 654 aa17.05■□□□□ 0.32
SCFD2-201ENST00000388940 INTS13Q9NVM9 706 aa17.05■□□□□ 0.32
SCFD2-201ENST00000388940 CCNL1Q9UK58 526 aaPredicted RBP17.05■□□□□ 0.32
SCFD2-201ENST00000388940 NMT2O60551 498 aa17.05■□□□□ 0.32
SCFD2-201ENST00000388940 CYP2D6P10635 497 aa17.05■□□□□ 0.32
SCFD2-201ENST00000388940 CCDC178Q5BJE1 867 aa17.05■□□□□ 0.32
SCFD2-201ENST00000388940 DZIP1Q86YF9 867 aaKnown RBP17.05■□□□□ 0.32
SCFD2-201ENST00000388940 GRAMD1CQ8IYS0 662 aa17.05■□□□□ 0.32
SCFD2-201ENST00000388940 FNBP4Q8N3X1 1017 aaPredicted RBP17.05■□□□□ 0.32
SCFD2-201ENST00000388940 SYMPKQ92797 1274 aaKnown RBP17.05■□□□□ 0.32
SCFD2-201ENST00000388940 EPSTI1Q96J88 318 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms