RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 ANKLE1Q8NAG6 615 aa32.02■■■□□ 2.72
NPHP3-202ENST00000383282 TRIB2Q92519 343 aa32.02■■■□□ 2.72
NPHP3-202ENST00000383282 PAWRQ96IZ0 340 aaKnown RBP32.02■■■□□ 2.72
NPHP3-202ENST00000383282 DNAJC2Q99543 621 aaKnown RBP32.02■■■□□ 2.72
NPHP3-202ENST00000383282 CWC22Q9HCG8 908 aaKnown RBP32.02■■■□□ 2.72
NPHP3-202ENST00000383282 XRCC5P13010 732 aaKnown RBP32.01■■■□□ 2.71
NPHP3-202ENST00000383282 PDE6AP16499 860 aa32.01■■■□□ 2.71
NPHP3-202ENST00000383282 TRMT44Q8IYL2 757 aaKnown RBP32.01■■■□□ 2.71
NPHP3-202ENST00000383282 RBM27Q9P2N5 1060 aaKnown RBP32.01■■■□□ 2.71
NPHP3-202ENST00000383282 COG6Q9Y2V7 657 aa32.01■■■□□ 2.71
NPHP3-202ENST00000383282 RAB11FIP3O75154 756 aa32■■■□□ 2.71
NPHP3-202ENST00000383282 PLCD1P51178 756 aa32■■■□□ 2.71
NPHP3-202ENST00000383282 TRIM32Q13049 653 aa32■■■□□ 2.71
NPHP3-202ENST00000383282 Q3C1V9 767 aa32■■■□□ 2.71
NPHP3-202ENST00000383282 KIAA1683Q9H0B3 1180 aa32■■■□□ 2.71
NPHP3-202ENST00000383282 BCL11AQ9H165 835 aa32■■■□□ 2.71
NPHP3-202ENST00000383282 GOLIM4O00461 696 aa31.99■■■□□ 2.71
NPHP3-202ENST00000383282 CCNA1P78396 465 aa31.99■■■□□ 2.71
NPHP3-202ENST00000383282 GPR142Q7Z601 462 aa31.99■■■□□ 2.71
NPHP3-202ENST00000383282 ZBTB40Q9NUA8 1239 aa31.99■■■□□ 2.71
NPHP3-202ENST00000383282 RABGAP1Q9Y3P9 1069 aa31.99■■■□□ 2.71
NPHP3-202ENST00000383282 ZNF532Q9HCE3 1301 aa31.99■■■□□ 2.71
NPHP3-202ENST00000383282 ZKSCAN1P17029 563 aaPredicted RBP31.98■■■□□ 2.71
NPHP3-202ENST00000383282 SHMT1P34896 483 aa31.98■■■□□ 2.71
NPHP3-202ENST00000383282 RGS2P41220 211 aa31.98■■■□□ 2.71
NPHP3-202ENST00000383282 PLEKHH3Q7Z736 793 aa31.98■■■□□ 2.71
NPHP3-202ENST00000383282 PORCNQ9H237 461 aa31.98■■■□□ 2.71
NPHP3-202ENST00000383282 MCM9Q9NXL9 1143 aa31.98■■■□□ 2.71
NPHP3-202ENST00000383282 PRKAR2AP13861 404 aaKnown RBP31.97■■■□□ 2.71
NPHP3-202ENST00000383282 CATSPERGQ6ZRH7 1159 aa31.97■■■□□ 2.71
NPHP3-202ENST00000383282 DIS3LQ8TF46 1054 aaKnown RBP31.97■■■□□ 2.71
NPHP3-202ENST00000383282 VCAM1P19320 739 aa31.96■■■□□ 2.71
NPHP3-202ENST00000383282 GLRX3O76003 335 aaKnown RBP31.95■■■□□ 2.71
NPHP3-202ENST00000383282 GABPAQ06546 454 aa31.95■■■□□ 2.71
NPHP3-202ENST00000383282 MAP3K21Q5TCX8 1036 aa31.95■■■□□ 2.71
NPHP3-202ENST00000383282 SIRT2Q8IXJ6 389 aa31.95■■■□□ 2.71
NPHP3-202ENST00000383282 ACER1Q8TDN7 264 aa31.95■■■□□ 2.71
NPHP3-202ENST00000383282 NBPF3Q9H094 633 aa31.95■■■□□ 2.71
NPHP3-202ENST00000383282 MORN1Q5T089 497 aa31.94■■■□□ 2.7
NPHP3-202ENST00000383282 USP6NLQ92738 828 aa31.94■■■□□ 2.7
NPHP3-202ENST00000383282 APBA2Q99767 749 aa31.94■■■□□ 2.7
NPHP3-202ENST00000383282 TRIOBPQ9H2D6 2365 aa31.94■■■□□ 2.7
NPHP3-202ENST00000383282 PLXNB2O15031 1838 aa31.93■■■□□ 2.7
NPHP3-202ENST00000383282 MPHOSPH10O00566 681 aaKnown RBP31.93■■■□□ 2.7
NPHP3-202ENST00000383282 SDR42E1Q8WUS8 393 aa31.93■■■□□ 2.7
NPHP3-202ENST00000383282 DCP1AQ9NPI6 582 aaPredicted RBP31.93■■■□□ 2.7
NPHP3-202ENST00000383282 PAG1Q9NWQ8 432 aa31.93■■■□□ 2.7
NPHP3-202ENST00000383282 OGDHLQ9ULD0 1010 aa31.93■■■□□ 2.7
NPHP3-202ENST00000383282 TCRBV5S4A2TA0A5A2 114 aa31.92■■■□□ 2.7
NPHP3-202ENST00000383282 SEPT2Q15019 361 aa31.92■■■□□ 2.7
NPHP3-202ENST00000383282 WDR78Q5VTH9 848 aa31.92■■■□□ 2.7
NPHP3-202ENST00000383282 POTEEQ6S8J3 1075 aa31.92■■■□□ 2.7
NPHP3-202ENST00000383282 LCORLQ8N3X6 602 aa31.92■■■□□ 2.7
NPHP3-202ENST00000383282 PRO3102Q9H379 93 aa31.92■■■□□ 2.7
NPHP3-202ENST00000383282 CNMDO75829 334 aa31.91■■■□□ 2.7
NPHP3-202ENST00000383282 GUCY1A2P33402 732 aa31.91■■■□□ 2.7
NPHP3-202ENST00000383282 LBX2Q6XYB7 198 aa31.91■■■□□ 2.7
NPHP3-202ENST00000383282 EDC3Q96F86 508 aaKnown RBP31.91■■■□□ 2.7
NPHP3-202ENST00000383282 DDX24Q9GZR7 859 aaKnown RBP eCLIP31.91■■■□□ 2.7
NPHP3-202ENST00000383282 BOLA2Q9H3K6 86 aa31.91■■■□□ 2.7
NPHP3-202ENST00000383282 C11orf49Q9H6J7 331 aa31.91■■■□□ 2.7
NPHP3-202ENST00000383282 RPAP3Q9H6T3 665 aaPredicted RBP31.91■■■□□ 2.7
NPHP3-202ENST00000383282 RCAN3Q9UKA8 241 aa31.91■■■□□ 2.7
NPHP3-202ENST00000383282 DDX60LQ5H9U9 1706 aaKnown RBP31.91■■■□□ 2.7
NPHP3-202ENST00000383282 NAV1Q8NEY1 1877 aa31.91■■■□□ 2.7
NPHP3-202ENST00000383282 CACNB2Q08289 660 aaPredicted RBP31.9■■■□□ 2.7
NPHP3-202ENST00000383282 MAP2K5Q13163 448 aa31.9■■■□□ 2.7
NPHP3-202ENST00000383282 SWAP70Q9UH65 585 aa31.9■■■□□ 2.7
NPHP3-202ENST00000383282 IVNS1ABPQ9Y6Y0 642 aa31.9■■■□□ 2.7
NPHP3-202ENST00000383282 ATP5JP18859 108 aa31.89■■■□□ 2.7
NPHP3-202ENST00000383282 ARMT1Q9H993 441 aa31.89■■■□□ 2.7
NPHP3-202ENST00000383282 A0A1W2PPC1 479 aa31.88■■■□□ 2.69
NPHP3-202ENST00000383282 SPDYE16A6NNV3 312 aaPredicted RBP31.88■■■□□ 2.69
NPHP3-202ENST00000383282 ADD2P35612 726 aa31.88■■■□□ 2.69
NPHP3-202ENST00000383282 CCL14Q16627 93 aa31.88■■■□□ 2.69
NPHP3-202ENST00000383282 ATP8A2Q9NTI2 1148 aa31.88■■■□□ 2.69
NPHP3-202ENST00000383282 SLC15A5A6NIM6 579 aa31.87■■■□□ 2.69
NPHP3-202ENST00000383282 TMEM179Q6ZVK1 233 aa31.87■■■□□ 2.69
NPHP3-202ENST00000383282 AMOTL1Q8IY63 956 aa31.87■■■□□ 2.69
NPHP3-202ENST00000383282 C7orf61Q8IZ16 206 aa31.87■■■□□ 2.69
NPHP3-202ENST00000383282 MBD4O95243 580 aa31.86■■■□□ 2.69
NPHP3-202ENST00000383282 MNX1P50219 401 aaPredicted RBP31.86■■■□□ 2.69
NPHP3-202ENST00000383282 EVX2Q03828 476 aa31.86■■■□□ 2.69
NPHP3-202ENST00000383282 MFSD14CQ5VZR4 134 aa31.86■■■□□ 2.69
NPHP3-202ENST00000383282 HAUS7Q99871 368 aa31.86■■■□□ 2.69
NPHP3-202ENST00000383282 BTBD7Q9P203 1132 aa31.86■■■□□ 2.69
NPHP3-202ENST00000383282 CYP2D6P10635 497 aa31.85■■■□□ 2.69
NPHP3-202ENST00000383282 PTPREP23469 700 aa31.85■■■□□ 2.69
NPHP3-202ENST00000383282 DDRGK1Q96HY6 314 aa31.85■■■□□ 2.69
NPHP3-202ENST00000383282 HOXC10Q9NYD6 342 aa31.85■■■□□ 2.69
NPHP3-202ENST00000383282 RANBP2P49792 3224 aaKnown RBP31.84■■■□□ 2.69
NPHP3-202ENST00000383282 A0A1W2PRG0 241 aa31.84■■■□□ 2.69
NPHP3-202ENST00000383282 CCND3P30281 292 aaPredicted RBP31.84■■■□□ 2.69
NPHP3-202ENST00000383282 LRRCC1Q9C099 1032 aa31.84■■■□□ 2.69
NPHP3-202ENST00000383282 TANGO6Q9C0B7 1094 aa31.84■■■□□ 2.69
NPHP3-202ENST00000383282 STAP2Q9UGK3 403 aa31.84■■■□□ 2.69
NPHP3-202ENST00000383282 COG2Q14746 738 aa31.83■■■□□ 2.69
NPHP3-202ENST00000383282 SLC44A5Q8NCS7 719 aa31.83■■■□□ 2.69
NPHP3-202ENST00000383282 DYNLL2Q96FJ2 89 aa31.83■■■□□ 2.69
NPHP3-202ENST00000383282 SH2D4AQ9H788 454 aa31.83■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms