RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 EZH1Q92800 747 aaPredicted RBP16.84■□□□□ 0.29
VLDLR-202ENST00000382099 ATP1A1P05023 1023 aaKnown RBP16.84■□□□□ 0.29
VLDLR-202ENST00000382099 STX17P56962 302 aa16.84■□□□□ 0.29
VLDLR-202ENST00000382099 PTGISQ16647 500 aa16.84■□□□□ 0.29
VLDLR-202ENST00000382099 CHST3Q7LGC8 479 aa16.84■□□□□ 0.29
VLDLR-202ENST00000382099 SUDS3Q9H7L9 328 aaPredicted RBP16.84■□□□□ 0.29
VLDLR-202ENST00000382099 HOMER3Q9NSC5 361 aa16.84■□□□□ 0.29
VLDLR-202ENST00000382099 AKAP12Q02952 1782 aa16.83■□□□□ 0.29
VLDLR-202ENST00000382099 PRR36Q9H6K5 1346 aa16.83■□□□□ 0.29
VLDLR-202ENST00000382099 ZNF185O15231 689 aa16.83■□□□□ 0.29
VLDLR-202ENST00000382099 GNAT1P11488 350 aa16.83■□□□□ 0.29
VLDLR-202ENST00000382099 IFFO1Q0D2I5 559 aa16.83■□□□□ 0.29
VLDLR-202ENST00000382099 ZNF589Q86UQ0 364 aaPredicted RBP16.83■□□□□ 0.29
VLDLR-202ENST00000382099 PANX2Q96RD6 677 aa16.83■□□□□ 0.29
VLDLR-202ENST00000382099 NUP58Q9BVL2 599 aa16.83■□□□□ 0.29
VLDLR-202ENST00000382099 TMEM165Q9HC07 324 aa16.83■□□□□ 0.29
VLDLR-202ENST00000382099 TFR2Q9UP52 801 aa16.83■□□□□ 0.29
VLDLR-202ENST00000382099 RASGRP2Q7LDG7 609 aa16.83■□□□□ 0.28
VLDLR-202ENST00000382099 TSGA10Q9BZW7 698 aa16.83■□□□□ 0.28
VLDLR-202ENST00000382099 CCDC8Q9H0W5 538 aaPredicted RBP16.83■□□□□ 0.28
VLDLR-202ENST00000382099 GJB4Q9NTQ9 266 aa16.83■□□□□ 0.28
VLDLR-202ENST00000382099 DIAPH2O60879 1101 aa16.83■□□□□ 0.28
VLDLR-202ENST00000382099 NR1D1P20393 614 aa16.83■□□□□ 0.28
VLDLR-202ENST00000382099 PAPOLAP51003 745 aaKnown RBP16.83■□□□□ 0.28
VLDLR-202ENST00000382099 SKOR1P84550 965 aa16.83■□□□□ 0.28
VLDLR-202ENST00000382099 CKAP4Q07065 602 aaKnown RBP16.83■□□□□ 0.28
VLDLR-202ENST00000382099 SLC5A9Q2M3M2 681 aa16.83■□□□□ 0.28
VLDLR-202ENST00000382099 RAB11FIP4Q86YS3 637 aa16.83■□□□□ 0.28
VLDLR-202ENST00000382099 EHBP1Q8NDI1 1231 aa16.83■□□□□ 0.28
VLDLR-202ENST00000382099 PAPOLBQ9NRJ5 636 aaKnown RBP16.83■□□□□ 0.28
VLDLR-202ENST00000382099 CRB1P82279 1406 aa16.82■□□□□ 0.28
VLDLR-202ENST00000382099 ATP6V1G2O95670 118 aa16.82■□□□□ 0.28
VLDLR-202ENST00000382099 ANXA1P04083 346 aa16.82■□□□□ 0.28
VLDLR-202ENST00000382099 EZH2Q15910 746 aaKnown RBP16.82■□□□□ 0.28
VLDLR-202ENST00000382099 NBPF14Q5TI25 921 aa16.82■□□□□ 0.28
VLDLR-202ENST00000382099 CUL5Q93034 780 aa16.82■□□□□ 0.28
VLDLR-202ENST00000382099 NUP88Q99567 741 aaPredicted RBP16.82■□□□□ 0.28
VLDLR-202ENST00000382099 LMCD1Q9NZU5 365 aa16.82■□□□□ 0.28
VLDLR-202ENST00000382099 TUBGCP6Q96RT7 1819 aa16.82■□□□□ 0.28
VLDLR-202ENST00000382099 ATP5JP18859 108 aa16.82■□□□□ 0.28
VLDLR-202ENST00000382099 SCTRP47872 440 aa16.82■□□□□ 0.28
VLDLR-202ENST00000382099 FMR1Q06787 632 aaKnown RBP eCLIP16.82■□□□□ 0.28
VLDLR-202ENST00000382099 KRT32Q14532 448 aa16.82■□□□□ 0.28
VLDLR-202ENST00000382099 TSEN2Q8NCE0 465 aaKnown RBP16.82■□□□□ 0.28
VLDLR-202ENST00000382099 CYFIP2Q96F07 1278 aa16.82■□□□□ 0.28
VLDLR-202ENST00000382099 C8orf76Q96K31 380 aa16.82■□□□□ 0.28
VLDLR-202ENST00000382099 PEAK1Q9H792 1746 aa16.82■□□□□ 0.28
VLDLR-202ENST00000382099 NEDD4P46934 1319 aa16.82■□□□□ 0.28
VLDLR-202ENST00000382099 FOXN1O15353 648 aa16.81■□□□□ 0.28
VLDLR-202ENST00000382099 RTN3O95197 1032 aaPredicted RBP16.81■□□□□ 0.28
VLDLR-202ENST00000382099 PYGBP11216 843 aa16.81■□□□□ 0.28
VLDLR-202ENST00000382099 CFAP58Q5T655 872 aa16.81■□□□□ 0.28
VLDLR-202ENST00000382099 JAKMIP2Q96AA8 810 aa16.81■□□□□ 0.28
VLDLR-202ENST00000382099 NAA15Q9BXJ9 866 aaKnown RBP16.81■□□□□ 0.28
VLDLR-202ENST00000382099 OSBPL7Q9BZF2 842 aa16.81■□□□□ 0.28
VLDLR-202ENST00000382099 CCDC61Q9Y6R9 512 aa16.81■□□□□ 0.28
VLDLR-202ENST00000382099 TEFQ10587 303 aa16.81■□□□□ 0.28
VLDLR-202ENST00000382099 NUTM2AQ8IVF1 878 aaPredicted RBP16.81■□□□□ 0.28
VLDLR-202ENST00000382099 HDAC7Q8WUI4 952 aa16.81■□□□□ 0.28
VLDLR-202ENST00000382099 C15orf41Q9Y2V0 281 aa16.81■□□□□ 0.28
VLDLR-202ENST00000382099 RIMS1Q86UR5 1692 aaKnown RBP16.81■□□□□ 0.28
VLDLR-202ENST00000382099 CTDNEP1O95476 244 aa16.81■□□□□ 0.28
VLDLR-202ENST00000382099 SETSIPP0DME0 302 aa16.81■□□□□ 0.28
VLDLR-202ENST00000382099 AMPD2Q01433 879 aa16.81■□□□□ 0.28
VLDLR-202ENST00000382099 ANKRD20A8PQ5CZ79 823 aa16.81■□□□□ 0.28
VLDLR-202ENST00000382099 CCDC102BQ68D86 513 aa16.81■□□□□ 0.28
VLDLR-202ENST00000382099 TRIM68Q6AZZ1 485 aa16.81■□□□□ 0.28
VLDLR-202ENST00000382099 MAATS1Q7Z4T9 603 aa16.81■□□□□ 0.28
VLDLR-202ENST00000382099 NGDNQ8NEJ9 315 aaKnown RBP16.81■□□□□ 0.28
VLDLR-202ENST00000382099 OSBPL9Q96SU4 736 aa16.81■□□□□ 0.28
VLDLR-202ENST00000382099 ITSN1Q15811 1721 aa16.81■□□□□ 0.28
VLDLR-202ENST00000382099 TSPOAP1O95153 1857 aa16.81■□□□□ 0.28
VLDLR-202ENST00000382099 HIP1O00291 1037 aa16.8■□□□□ 0.28
VLDLR-202ENST00000382099 CMA1P23946 247 aa16.8■□□□□ 0.28
VLDLR-202ENST00000382099 DRP2Q13474 957 aa16.8■□□□□ 0.28
VLDLR-202ENST00000382099 CCDC43Q96MW1 224 aaKnown RBP16.8■□□□□ 0.28
VLDLR-202ENST00000382099 ZIM3Q96PE6 472 aa16.8■□□□□ 0.28
VLDLR-202ENST00000382099 HMG20BQ9P0W2 317 aa16.8■□□□□ 0.28
VLDLR-202ENST00000382099 PA2G4Q9UQ80 394 aaKnown RBP16.8■□□□□ 0.28
VLDLR-202ENST00000382099 MROH7-TTC4A0A0A0MT08 1334 aa16.8■□□□□ 0.28
VLDLR-202ENST00000382099 TARSL2A2RTX5 802 aaKnown RBP16.8■□□□□ 0.28
VLDLR-202ENST00000382099 LGR5O75473 907 aa16.8■□□□□ 0.28
VLDLR-202ENST00000382099 FAM107AO95990 144 aa16.8■□□□□ 0.28
VLDLR-202ENST00000382099 HSP90AB4PQ58FF6 505 aa16.8■□□□□ 0.28
VLDLR-202ENST00000382099 CCDC122Q5T0U0 273 aa16.8■□□□□ 0.28
VLDLR-202ENST00000382099 MAGEC3Q8TD91 643 aa16.8■□□□□ 0.28
VLDLR-202ENST00000382099 SMNDC1O75940 238 aaKnown RBP eCLIP16.79■□□□□ 0.28
VLDLR-202ENST00000382099 ODF2Q5BJF6 829 aa16.79■□□□□ 0.28
VLDLR-202ENST00000382099 ANO1Q5XXA6 986 aa16.79■□□□□ 0.28
VLDLR-202ENST00000382099 MAEAQ7L5Y9 396 aa16.79■□□□□ 0.28
VLDLR-202ENST00000382099 HVCN1Q96D96 273 aa16.79■□□□□ 0.28
VLDLR-202ENST00000382099 PSMB7Q99436 277 aa16.79■□□□□ 0.28
VLDLR-202ENST00000382099 TUBE1Q9UJT0 475 aa16.79■□□□□ 0.28
VLDLR-202ENST00000382099 COQ9O75208 318 aa16.79■□□□□ 0.28
VLDLR-202ENST00000382099 PPFIA2O75334 1257 aa16.79■□□□□ 0.28
VLDLR-202ENST00000382099 CCT6AP40227 531 aaKnown RBP16.79■□□□□ 0.28
VLDLR-202ENST00000382099 CCDC129Q6ZRS4 1044 aa16.79■□□□□ 0.28
VLDLR-202ENST00000382099 TRAPPC11Q7Z392 1133 aa16.79■□□□□ 0.28
VLDLR-202ENST00000382099 TBC1D1Q86TI0 1168 aaPredicted RBP16.79■□□□□ 0.28
VLDLR-202ENST00000382099 EDC3Q96F86 508 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms