RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 A0A1W2PQD8 194 aa6.38□□□□□ -1.39
RFC1-202ENST00000381897 SLC27A2O14975 620 aa6.38□□□□□ -1.39
RFC1-202ENST00000381897 CCZ1BP86790 482 aa6.38□□□□□ -1.39
RFC1-202ENST00000381897 CCZ1P86791 482 aaPredicted RBP6.38□□□□□ -1.39
RFC1-202ENST00000381897 PPFIA1Q13136 1202 aa6.38□□□□□ -1.39
RFC1-202ENST00000381897 MTMR3Q13615 1198 aa6.38□□□□□ -1.39
RFC1-202ENST00000381897 IQSEC1Q6DN90 963 aa6.38□□□□□ -1.39
RFC1-202ENST00000381897 PHACTR3Q96KR7 559 aa6.38□□□□□ -1.39
RFC1-202ENST00000381897 PARD6BQ9BYG5 372 aa6.38□□□□□ -1.39
RFC1-202ENST00000381897 GPCPD1Q9NPB8 672 aa6.38□□□□□ -1.39
RFC1-202ENST00000381897 EMILIN1Q9Y6C2 1016 aa6.38□□□□□ -1.39
RFC1-202ENST00000381897 ABCA9Q8IUA7 1624 aa6.38□□□□□ -1.39
RFC1-202ENST00000381897 PALM3A6NDB9 673 aaPredicted RBP6.38□□□□□ -1.39
RFC1-202ENST00000381897 APOBRQ0VD83 1088 aa6.38□□□□□ -1.39
RFC1-202ENST00000381897 TEFQ10587 303 aa6.38□□□□□ -1.39
RFC1-202ENST00000381897 NEDD9Q14511 834 aa6.38□□□□□ -1.39
RFC1-202ENST00000381897 HIC1Q14526 733 aa6.38□□□□□ -1.39
RFC1-202ENST00000381897 CAMKK1Q8N5S9 505 aa6.38□□□□□ -1.39
RFC1-202ENST00000381897 KIAA1468Q9P260 1216 aa6.38□□□□□ -1.39
RFC1-202ENST00000381897 ABCA6Q8N139 1617 aa6.38□□□□□ -1.39
RFC1-202ENST00000381897 QRICH2Q9H0J4 1663 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 GOLGA8KD6RF30 607 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 PLA2G4AP47712 749 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 STIM1Q13586 685 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 ZNF569Q5MCW4 686 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 ADALQ6DHV7 355 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 CCDC121Q6ZUS5 278 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 C11orf57Q6ZUT1 292 aaPredicted RBP6.37□□□□□ -1.39
RFC1-202ENST00000381897 CCDC24Q8N4L8 307 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 CCDC51Q96ER9 411 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 SGSM3Q96HU1 749 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 NEUROD6Q96NK8 337 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 RAI14Q9P0K7 980 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 LRCH1Q9Y2L9 728 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 MAP3K5Q99683 1374 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 FAM83GA6ND36 823 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 SNUPNO95149 360 aaKnown RBP6.37□□□□□ -1.39
RFC1-202ENST00000381897 MAN1A1P33908 653 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 MAPK10P53779 464 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 BASP1P80723 227 aaKnown RBP6.37□□□□□ -1.39
RFC1-202ENST00000381897 SPAG1Q07617 926 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 MRPL28Q13084 256 aaKnown RBP6.37□□□□□ -1.39
RFC1-202ENST00000381897 C1orf141Q5JVX7 400 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 RBM43Q6ZSC3 357 aaKnown RBP6.37□□□□□ -1.39
RFC1-202ENST00000381897 Q6ZUG5 572 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 ARFGAP2Q8N6H7 521 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 CABS1Q96KC9 395 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 RMI1Q9H9A7 625 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 MYO1AQ9UBC5 1043 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 SHPRHQ149N8 1683 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 TTC36A6NLP5 189 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 USP27XA6NNY8 438 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 SCAMP3O14828 347 aaKnown RBP6.37□□□□□ -1.39
RFC1-202ENST00000381897 RHOXF2BP0C7M4 288 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 IL13P35225 146 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 NFKB2Q00653 900 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 MLLT1Q03111 559 aaPredicted RBP6.37□□□□□ -1.39
RFC1-202ENST00000381897 NMIQ13287 307 aaPredicted RBP6.37□□□□□ -1.39
RFC1-202ENST00000381897 NBPF20Q3BBV1 942 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 GRAMD1BQ3KR37 738 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 FAAH2Q6GMR7 532 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 CFAP57Q96MR6 1250 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 RHOXF2Q9BQY4 288 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 BABAM1Q9NWV8 329 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 AATFQ9NY61 560 aaKnown RBP eCLIP6.37□□□□□ -1.39
RFC1-202ENST00000381897 CDC23Q9UJX2 597 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 AK9Q5TCS8 1911 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 FAM170AA1A519 330 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 GNAT3A8MTJ3 354 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 PHACTR2O75167 634 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 MYCLP1P12525 358 aaPredicted RBP6.37□□□□□ -1.39
RFC1-202ENST00000381897 SMAD1Q15797 465 aaKnown RBP6.37□□□□□ -1.39
RFC1-202ENST00000381897 NFXL1Q6ZNB6 911 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 SUGP1Q8IWZ8 645 aaKnown RBP6.37□□□□□ -1.39
RFC1-202ENST00000381897 IL17RAQ96F46 866 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 FANCLQ9NW38 375 aa6.37□□□□□ -1.39
RFC1-202ENST00000381897 FRMD3A2A2Y4 597 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 PTPDC1A2A3K4 754 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 SASH1O94885 1247 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 CORO7P57737 925 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 KARSQ15046 597 aaKnown RBP6.36□□□□□ -1.39
RFC1-202ENST00000381897 AMOTL1Q8IY63 956 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 MSANTD4Q8NCY6 345 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 PYM1Q9BRP8 204 aaKnown RBP6.36□□□□□ -1.39
RFC1-202ENST00000381897 ALDH8A1Q9H2A2 487 aaPredicted RBP6.36□□□□□ -1.39
RFC1-202ENST00000381897 FAM204AQ9H8W3 233 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 VEZTQ9HBM0 779 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 DMGDHQ9UI17 866 aaKnown RBP6.36□□□□□ -1.39
RFC1-202ENST00000381897 FAN1Q9Y2M0 1017 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 TRIM64A6NGJ6 449 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 TRIM64BA6NI03 449 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 USO1O60763 962 aaKnown RBP6.36□□□□□ -1.39
RFC1-202ENST00000381897 PAFAH1B1P43034 410 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 SPECC1LQ69YQ0 1117 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 DDX54Q8TDD1 881 aaKnown RBP6.36□□□□□ -1.39
RFC1-202ENST00000381897 PARD3BQ8TEW8 1205 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 JAKMIP2Q96AA8 810 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 CXorf56Q9H5V9 222 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 RCOR1Q9UKL0 485 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 TPCN1Q9ULQ1 816 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms