RNA–Protein interactions for RNA: ENST00000381177.6

CD99-201, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 2

Gene CD99, Length 756 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-201ENST00000381177 NFKBIEO00221 500 aa11.28□□□□□ -0.6
CD99-201ENST00000381177 PRPF3O43395 683 aaKnown RBP11.28□□□□□ -0.6
CD99-201ENST00000381177 FIBPO43427 364 aa11.28□□□□□ -0.6
CD99-201ENST00000381177 MMP14P50281 582 aa11.28□□□□□ -0.6
CD99-201ENST00000381177 UBE2HP62256 183 aa11.28□□□□□ -0.6
CD99-201ENST00000381177 CXCL9Q07325 125 aa11.28□□□□□ -0.6
CD99-201ENST00000381177 FUT2Q10981 343 aa11.28□□□□□ -0.6
CD99-201ENST00000381177 KRT40Q6A162 431 aa11.28□□□□□ -0.6
CD99-201ENST00000381177 OTUD7BQ6GQQ9 843 aa11.28□□□□□ -0.6
CD99-201ENST00000381177 TMTC3Q6ZXV5 915 aa11.28□□□□□ -0.6
CD99-201ENST00000381177 KLHL34Q8N239 644 aa11.28□□□□□ -0.6
CD99-201ENST00000381177 JDP2Q8WYK2 163 aa11.28□□□□□ -0.6
CD99-201ENST00000381177 AIFM3Q96NN9 605 aa11.28□□□□□ -0.6
CD99-201ENST00000381177 TDRD3Q9H7E2 651 aaKnown RBP11.28□□□□□ -0.6
CD99-201ENST00000381177 CFAP45Q9UL16 551 aa11.28□□□□□ -0.6
CD99-201ENST00000381177 BCS1LQ9Y276 419 aa11.28□□□□□ -0.6
CD99-201ENST00000381177 GREB1LQ9C091 1923 aaPredicted RBP11.27□□□□□ -0.6
CD99-201ENST00000381177 COL2A1P02458 1487 aaPredicted RBP11.27□□□□□ -0.6
CD99-201ENST00000381177 SPDYE2BA6NHP3 402 aa11.27□□□□□ -0.61
CD99-201ENST00000381177 GADD45BO75293 160 aaPredicted RBP11.27□□□□□ -0.61
CD99-201ENST00000381177 SPDYE6P0CI01 402 aa11.27□□□□□ -0.61
CD99-201ENST00000381177 KIF5BP33176 963 aa11.27□□□□□ -0.61
CD99-201ENST00000381177 SHMT1P34896 483 aa11.27□□□□□ -0.61
CD99-201ENST00000381177 GNAQP50148 359 aa11.27□□□□□ -0.61
CD99-201ENST00000381177 AKAP17AQ02040 695 aaKnown RBP11.27□□□□□ -0.61
CD99-201ENST00000381177 TRIM29Q14134 588 aa11.27□□□□□ -0.61
CD99-201ENST00000381177 GRM4Q14833 912 aa11.27□□□□□ -0.61
CD99-201ENST00000381177 CIAPIN1Q6FI81 312 aa11.27□□□□□ -0.61
CD99-201ENST00000381177 BRAPQ7Z569 592 aa11.27□□□□□ -0.61
CD99-201ENST00000381177 FOXP4Q8IVH2 680 aaPredicted RBP11.27□□□□□ -0.61
CD99-201ENST00000381177 ZFPM1Q8IX07 1006 aa11.27□□□□□ -0.61
CD99-201ENST00000381177 OGFOD1Q8N543 542 aa11.27□□□□□ -0.61
CD99-201ENST00000381177 MTMR14Q8NCE2 650 aa11.27□□□□□ -0.61
CD99-201ENST00000381177 PNMA1Q8ND90 353 aa11.27□□□□□ -0.61
CD99-201ENST00000381177 CCDC17Q96LX7 622 aa11.27□□□□□ -0.61
CD99-201ENST00000381177 ZNF396Q96N95 335 aaPredicted RBP11.27□□□□□ -0.61
CD99-201ENST00000381177 TMEM47Q9BQJ4 181 aa11.27□□□□□ -0.61
CD99-201ENST00000381177 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.27□□□□□ -0.61
CD99-201ENST00000381177 PI4KBQ9UBF8 816 aa11.27□□□□□ -0.61
CD99-201ENST00000381177 ATRNL1Q5VV63 1379 aa11.27□□□□□ -0.61
CD99-201ENST00000381177 IGKV6D-41A0A0C4DH26 115 aa11.26□□□□□ -0.61
CD99-201ENST00000381177 DDTLA6NHG4 134 aaPredicted RBP11.26□□□□□ -0.61
CD99-201ENST00000381177 PLEKHA8P1O95397 391 aa11.26□□□□□ -0.61
CD99-201ENST00000381177 TOP1P11387 765 aaKnown RBP11.26□□□□□ -0.61
CD99-201ENST00000381177 GUCY1A2P33402 732 aa11.26□□□□□ -0.61
CD99-201ENST00000381177 CACNB3P54284 484 aa11.26□□□□□ -0.61
CD99-201ENST00000381177 KIF23Q02241 960 aaPredicted RBP11.26□□□□□ -0.61
CD99-201ENST00000381177 TNIP1Q15025 636 aa11.26□□□□□ -0.61
CD99-201ENST00000381177 DLGAP5Q15398 846 aa11.26□□□□□ -0.61
CD99-201ENST00000381177 SH3BP5LQ7L8J4 393 aa11.26□□□□□ -0.61
CD99-201ENST00000381177 METTL16Q86W50 562 aaKnown RBP11.26□□□□□ -0.61
CD99-201ENST00000381177 CMTR1Q8N1G2 835 aaKnown RBP11.26□□□□□ -0.61
CD99-201ENST00000381177 CCDC82Q8N4S0 544 aa11.26□□□□□ -0.61
CD99-201ENST00000381177 LEO1Q8WVC0 666 aaPredicted RBP11.26□□□□□ -0.61
CD99-201ENST00000381177 GZF1Q9H116 711 aaPredicted RBP11.26□□□□□ -0.61
CD99-201ENST00000381177 SPON1Q9HCB6 807 aa11.26□□□□□ -0.61
CD99-201ENST00000381177 GJB4Q9NTQ9 266 aa11.26□□□□□ -0.61
CD99-201ENST00000381177 TMOD2Q9NZR1 351 aa11.26□□□□□ -0.61
CD99-201ENST00000381177 TFIP11Q9UBB9 837 aaKnown RBP11.26□□□□□ -0.61
CD99-201ENST00000381177 RCOR1Q9UKL0 485 aa11.26□□□□□ -0.61
CD99-201ENST00000381177 STX8Q9UNK0 236 aa11.26□□□□□ -0.61
CD99-201ENST00000381177 ZBTB12Q9Y330 459 aaPredicted RBP11.26□□□□□ -0.61
CD99-201ENST00000381177 CNTNAP5Q8WYK1 1306 aa11.26□□□□□ -0.61
CD99-201ENST00000381177 PALM3A6NDB9 673 aaPredicted RBP11.25□□□□□ -0.61
CD99-201ENST00000381177 UBE2Q2LH0YL09 131 aa11.25□□□□□ -0.61
CD99-201ENST00000381177 AKR1B1P15121 316 aa11.25□□□□□ -0.61
CD99-201ENST00000381177 TCP10Q12799 353 aa11.25□□□□□ -0.61
CD99-201ENST00000381177 PKN1Q16512 942 aa11.25□□□□□ -0.61
CD99-201ENST00000381177 TMEM132AQ24JP5 1023 aa11.25□□□□□ -0.61
CD99-201ENST00000381177 PPP4R3BQ5MIZ7 849 aa11.25□□□□□ -0.61
CD99-201ENST00000381177 FKBP1CQ5VVH2 108 aa11.25□□□□□ -0.61
CD99-201ENST00000381177 SRBD1Q8N5C6 995 aaKnown RBP11.25□□□□□ -0.61
CD99-201ENST00000381177 CEP95Q96GE4 821 aa11.25□□□□□ -0.61
CD99-201ENST00000381177 ZBED3Q96IU2 234 aaPredicted RBP11.25□□□□□ -0.61
CD99-201ENST00000381177 SPATA32Q96LK8 384 aa11.25□□□□□ -0.61
CD99-201ENST00000381177 LZTS2Q9BRK4 669 aa11.25□□□□□ -0.61
CD99-201ENST00000381177 MTMR4Q9NYA4 1195 aa11.25□□□□□ -0.61
CD99-201ENST00000381177 RBM27Q9P2N5 1060 aaKnown RBP11.25□□□□□ -0.61
CD99-201ENST00000381177 ZNF70Q9UC06 446 aaPredicted RBP11.25□□□□□ -0.61
CD99-201ENST00000381177 KIF28PB7ZC32 967 aa11.24□□□□□ -0.61
CD99-201ENST00000381177 FZD9O00144 591 aa11.24□□□□□ -0.61
CD99-201ENST00000381177 MMP1P03956 469 aa11.24□□□□□ -0.61
CD99-201ENST00000381177 XBP1P17861 261 aa11.24□□□□□ -0.61
CD99-201ENST00000381177 RPS12P25398 132 aaKnown RBP11.24□□□□□ -0.61
CD99-201ENST00000381177 U2AF2P26368 475 aaKnown RBP eCLIP11.24□□□□□ -0.611e-8■■□□□ 13.7
CD99-201ENST00000381177 SMARCA1P28370 1054 aa11.24□□□□□ -0.61
CD99-201ENST00000381177 SAFBQ15424 915 aaKnown RBP eCLIP11.24□□□□□ -0.61
CD99-201ENST00000381177 SPDYE2Q495Y8 402 aa11.24□□□□□ -0.61
CD99-201ENST00000381177 MYSM1Q5VVJ2 828 aa11.24□□□□□ -0.61
CD99-201ENST00000381177 CAVIN1Q6NZI2 390 aaKnown RBP11.24□□□□□ -0.61
CD99-201ENST00000381177 TATDN1Q6P1N9 297 aa11.24□□□□□ -0.61
CD99-201ENST00000381177 ZSCAN29Q8IWY8 852 aaPredicted RBP11.24□□□□□ -0.61
CD99-201ENST00000381177 NLGN2Q8NFZ4 835 aa11.24□□□□□ -0.61
CD99-201ENST00000381177 USP28Q96RU2 1077 aa11.24□□□□□ -0.61
CD99-201ENST00000381177 DNAJC18Q9H819 358 aa11.24□□□□□ -0.61
CD99-201ENST00000381177 RTEL1Q9NZ71 1219 aa11.24□□□□□ -0.61
CD99-201ENST00000381177 TMEM63CQ9P1W3 806 aa11.24□□□□□ -0.61
CD99-201ENST00000381177 MAD2L2Q9UI95 211 aa11.24□□□□□ -0.61
CD99-201ENST00000381177 V9GY48 417 aaPredicted RBP11.24□□□□□ -0.61
CD99-201ENST00000381177 MYH4Q9Y623 1939 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms