RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 FAM200AQ8TCP9 573 aa16.41■□□□□ 0.22
CLCN4-201ENST00000380829 ERCC4Q92889 916 aaPredicted RBP16.41■□□□□ 0.22
CLCN4-201ENST00000380829 ATP6V0A2Q9Y487 856 aa16.41■□□□□ 0.22
CLCN4-201ENST00000380829 WDHD1O75717 1129 aaPredicted RBP16.41■□□□□ 0.22
CLCN4-201ENST00000380829 HMGB2P26583 209 aaKnown RBP16.41■□□□□ 0.22
CLCN4-201ENST00000380829 SLC39A14Q15043 492 aa16.41■□□□□ 0.22
CLCN4-201ENST00000380829 SAFBQ15424 915 aaKnown RBP eCLIP16.41■□□□□ 0.22
CLCN4-201ENST00000380829 AXDND1Q5T1B0 1012 aaPredicted RBP16.41■□□□□ 0.22
CLCN4-201ENST00000380829 NOSTRINQ8IVI9 506 aa16.41■□□□□ 0.22
CLCN4-201ENST00000380829 SLC44A5Q8NCS7 719 aa16.41■□□□□ 0.22
CLCN4-201ENST00000380829 FBXW7Q969H0 707 aa16.41■□□□□ 0.22
CLCN4-201ENST00000380829 SOCS7O14512 581 aa16.4■□□□□ 0.22
CLCN4-201ENST00000380829 GTF2IP78347 998 aa16.4■□□□□ 0.22
CLCN4-201ENST00000380829 TFAP4Q01664 338 aa16.4■□□□□ 0.22
CLCN4-201ENST00000380829 AKAP17AQ02040 695 aaKnown RBP16.4■□□□□ 0.22
CLCN4-201ENST00000380829 FUT2Q10981 343 aa16.4■□□□□ 0.22
CLCN4-201ENST00000380829 NR5A1Q13285 461 aa16.4■□□□□ 0.22
CLCN4-201ENST00000380829 SHISA4Q96DD7 197 aa16.4■□□□□ 0.22
CLCN4-201ENST00000380829 MAP3K14Q99558 947 aa16.4■□□□□ 0.22
CLCN4-201ENST00000380829 RNF26Q9BY78 433 aaPredicted RBP16.4■□□□□ 0.22
CLCN4-201ENST00000380829 DNAJC25Q9H1X3 360 aa16.4■□□□□ 0.22
CLCN4-201ENST00000380829 LRRC37AA6NMS7 1700 aa16.4■□□□□ 0.22
CLCN4-201ENST00000380829 LTBP1Q14766 1721 aa16.4■□□□□ 0.22
CLCN4-201ENST00000380829 A0A087WWV3 80 aa16.4■□□□□ 0.22
CLCN4-201ENST00000380829 RXRBP28702 533 aa16.4■□□□□ 0.22
CLCN4-201ENST00000380829 PLCD1P51178 756 aa16.4■□□□□ 0.22
CLCN4-201ENST00000380829 GABPB1Q06547 395 aaPredicted RBP16.4■□□□□ 0.22
CLCN4-201ENST00000380829 PPP2R5BQ15173 497 aa16.4■□□□□ 0.22
CLCN4-201ENST00000380829 OXER1Q8TDS5 423 aa16.4■□□□□ 0.22
CLCN4-201ENST00000380829 PARP3Q9Y6F1 533 aa16.4■□□□□ 0.22
CLCN4-201ENST00000380829 V9GY48 417 aaPredicted RBP16.4■□□□□ 0.22
CLCN4-201ENST00000380829 DLEC1Q9Y238 1755 aa16.39■□□□□ 0.22
CLCN4-201ENST00000380829 ERICH4A6NGS2 130 aa16.39■□□□□ 0.21
CLCN4-201ENST00000380829 DDAH1O94760 285 aa16.39■□□□□ 0.21
CLCN4-201ENST00000380829 CALM1P0DP23 149 aa16.39■□□□□ 0.21
CLCN4-201ENST00000380829 CALM2P0DP24 149 aa16.39■□□□□ 0.21
CLCN4-201ENST00000380829 CALM3P0DP25 149 aa16.39■□□□□ 0.21
CLCN4-201ENST00000380829 NPR1P16066 1061 aa16.39■□□□□ 0.21
CLCN4-201ENST00000380829 PTPAQ15257 358 aa16.39■□□□□ 0.21
CLCN4-201ENST00000380829 PKN1Q16512 942 aa16.39■□□□□ 0.21
CLCN4-201ENST00000380829 TMC4Q7Z404 712 aa16.39■□□□□ 0.21
CLCN4-201ENST00000380829 C16orf45Q96MC5 204 aaPredicted RBP16.39■□□□□ 0.21
CLCN4-201ENST00000380829 MKNK2Q9HBH9 465 aa16.39■□□□□ 0.21
CLCN4-201ENST00000380829 CBX8Q9HC52 389 aa16.39■□□□□ 0.21
CLCN4-201ENST00000380829 RBM28Q9NW13 759 aaKnown RBP16.39■□□□□ 0.21
CLCN4-201ENST00000380829 VPS54Q9P1Q0 977 aa16.39■□□□□ 0.21
CLCN4-201ENST00000380829 GPR75-ASB3A0A0A6YYF3 556 aa16.39■□□□□ 0.21
CLCN4-201ENST00000380829 CTAGE5O15320 804 aa16.39■□□□□ 0.21
CLCN4-201ENST00000380829 RCSD1Q6JBY9 416 aa16.39■□□□□ 0.21
CLCN4-201ENST00000380829 AMOTL1Q8IY63 956 aa16.39■□□□□ 0.21
CLCN4-201ENST00000380829 IL17RBQ9NRM6 502 aa16.39■□□□□ 0.21
CLCN4-201ENST00000380829 F8W031 263 aaPredicted RBP16.38■□□□□ 0.21
CLCN4-201ENST00000380829 TMTC3Q6ZXV5 915 aa16.38■□□□□ 0.21
CLCN4-201ENST00000380829 TEX11Q8IYF3 940 aa16.38■□□□□ 0.21
CLCN4-201ENST00000380829 CTCFLQ8NI51 663 aaPredicted RBP16.38■□□□□ 0.21
CLCN4-201ENST00000380829 DDX41Q9UJV9 622 aaKnown RBP16.38■□□□□ 0.21
CLCN4-201ENST00000380829 NAV1Q8NEY1 1877 aa16.38■□□□□ 0.21
CLCN4-201ENST00000380829 PFKFB1P16118 471 aa16.38■□□□□ 0.21
CLCN4-201ENST00000380829 TOB1P50616 345 aaPredicted RBP16.38■□□□□ 0.21
CLCN4-201ENST00000380829 TBC1D22AQ8WUA7 517 aa16.38■□□□□ 0.21
CLCN4-201ENST00000380829 SDF4Q9BRK5 362 aa16.38■□□□□ 0.21
CLCN4-201ENST00000380829 NRXN2Q9P2S2 1712 aa16.38■□□□□ 0.21
CLCN4-201ENST00000380829 MYH6P13533 1939 aa16.37■□□□□ 0.21
CLCN4-201ENST00000380829 USP17L3A6NCW0 530 aa16.37■□□□□ 0.21
CLCN4-201ENST00000380829 USP17L4A6NCW7 530 aa16.37■□□□□ 0.21
CLCN4-201ENST00000380829 PRPF3O43395 683 aaKnown RBP16.37■□□□□ 0.21
CLCN4-201ENST00000380829 PTGS1P23219 599 aa16.37■□□□□ 0.21
CLCN4-201ENST00000380829 PDE6BP35913 854 aa16.37■□□□□ 0.21
CLCN4-201ENST00000380829 ZNF165P49910 485 aa16.37■□□□□ 0.21
CLCN4-201ENST00000380829 DOK7Q18PE1 504 aa16.37■□□□□ 0.21
CLCN4-201ENST00000380829 USP17L1Q7RTZ2 530 aa16.37■□□□□ 0.21
CLCN4-201ENST00000380829 SRBD1Q8N5C6 995 aaKnown RBP16.37■□□□□ 0.21
CLCN4-201ENST00000380829 FLAD1Q8NFF5 587 aa16.37■□□□□ 0.21
CLCN4-201ENST00000380829 CLIC6Q96NY7 704 aa16.37■□□□□ 0.21
CLCN4-201ENST00000380829 ZC3H12CQ9C0D7 883 aaKnown RBP16.37■□□□□ 0.21
CLCN4-201ENST00000380829 FOXP1Q9H334 677 aaPredicted RBP16.37■□□□□ 0.21
CLCN4-201ENST00000380829 ROBO3Q96MS0 1386 aa16.37■□□□□ 0.21
CLCN4-201ENST00000380829 CMA1P23946 247 aa16.37■□□□□ 0.21
CLCN4-201ENST00000380829 DPP8Q6V1X1 898 aaPredicted RBP16.37■□□□□ 0.21
CLCN4-201ENST00000380829 ZNF622Q969S3 477 aaKnown RBP eCLIP16.37■□□□□ 0.21
CLCN4-201ENST00000380829 MXD3Q9BW11 206 aa16.37■□□□□ 0.21
CLCN4-201ENST00000380829 FLT1P17948 1338 aa16.37■□□□□ 0.21
CLCN4-201ENST00000380829 CNTNAP5Q8WYK1 1306 aa16.37■□□□□ 0.21
CLCN4-201ENST00000380829 COL11A2P13942 1736 aaPredicted RBP16.36■□□□□ 0.21
CLCN4-201ENST00000380829 PPP6R2O75170 966 aa16.36■□□□□ 0.21
CLCN4-201ENST00000380829 ZNF202O95125 648 aa16.36■□□□□ 0.21
CLCN4-201ENST00000380829 TSPY3P0CV98 308 aa16.36■□□□□ 0.21
CLCN4-201ENST00000380829 TSPY8P0CW00 308 aa16.36■□□□□ 0.21
CLCN4-201ENST00000380829 ATP2B1P20020 1258 aa16.36■□□□□ 0.21
CLCN4-201ENST00000380829 ALDH1B1P30837 517 aa16.36■□□□□ 0.21
CLCN4-201ENST00000380829 RHBDL3P58872 404 aa16.36■□□□□ 0.21
CLCN4-201ENST00000380829 C11orf57Q6ZUT1 292 aaPredicted RBP16.36■□□□□ 0.21
CLCN4-201ENST00000380829 COA1Q9GZY4 146 aa16.36■□□□□ 0.21
CLCN4-201ENST00000380829 KAT14Q9H8E8 782 aa16.36■□□□□ 0.21
CLCN4-201ENST00000380829 FAM205AQ6ZU69 1335 aa16.36■□□□□ 0.21
CLCN4-201ENST00000380829 TERF2Q15554 542 aa16.36■□□□□ 0.21
CLCN4-201ENST00000380829 SHC4Q6S5L8 630 aa16.36■□□□□ 0.21
CLCN4-201ENST00000380829 ZNF444Q8N0Y2 327 aaPredicted RBP16.36■□□□□ 0.21
CLCN4-201ENST00000380829 JMYQ8N9B5 988 aa16.36■□□□□ 0.21
CLCN4-201ENST00000380829 MASTLQ96GX5 879 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms