RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 PCP11498 1178 aaKnown RBP18.6■□□□□ 0.57
VPS16-203ENST00000380469 SIK1P57059 783 aa18.6■□□□□ 0.57
VPS16-203ENST00000380469 ANKRD18AQ8IVF6 992 aa18.6■□□□□ 0.57
VPS16-203ENST00000380469 EPSTI1Q96J88 318 aa18.6■□□□□ 0.57
VPS16-203ENST00000380469 RIOK1Q9BRS2 568 aaKnown RBP18.6■□□□□ 0.57
VPS16-203ENST00000380469 BRIP1Q9BX63 1249 aa18.6■□□□□ 0.57
VPS16-203ENST00000380469 ZNF652Q9Y2D9 606 aa18.6■□□□□ 0.57
VPS16-203ENST00000380469 AFMP43652 599 aa18.59■□□□□ 0.57
VPS16-203ENST00000380469 GNG11P61952 73 aa18.59■□□□□ 0.57
VPS16-203ENST00000380469 UBE4AQ14139 1066 aa18.59■□□□□ 0.57
VPS16-203ENST00000380469 SPATA1Q5VX52 437 aa18.59■□□□□ 0.57
VPS16-203ENST00000380469 PAGE5Q96GU1 130 aa18.59■□□□□ 0.57
VPS16-203ENST00000380469 CDCA7Q9BWT1 371 aaPredicted RBP18.59■□□□□ 0.57
VPS16-203ENST00000380469 PHLPP1O60346 1717 aa18.59■□□□□ 0.57
VPS16-203ENST00000380469 A0A1B0GTH6 734 aa18.58■□□□□ 0.57
VPS16-203ENST00000380469 FAM205CA6NFA0 338 aa18.58■□□□□ 0.57
VPS16-203ENST00000380469 PRDM1O75626 825 aa18.58■□□□□ 0.57
VPS16-203ENST00000380469 FUT2Q10981 343 aa18.58■□□□□ 0.57
VPS16-203ENST00000380469 ZNF771Q7L3S4 317 aaPredicted RBP18.58■□□□□ 0.57
VPS16-203ENST00000380469 ZNF446Q9NWS9 450 aa18.58■□□□□ 0.57
VPS16-203ENST00000380469 PARP3Q9Y6F1 533 aa18.58■□□□□ 0.57
VPS16-203ENST00000380469 STRCQ7RTU9 1775 aa18.58■□□□□ 0.57
VPS16-203ENST00000380469 DOT1LQ8TEK3 1739 aa18.58■□□□□ 0.57
VPS16-203ENST00000380469 hCG_1642624A0A1W2PR95 340 aa18.58■□□□□ 0.56
VPS16-203ENST00000380469 EFCAB8A8MWE9 144 aa18.58■□□□□ 0.56
VPS16-203ENST00000380469 DYNLL1P63167 89 aaKnown RBP18.58■□□□□ 0.56
VPS16-203ENST00000380469 SYMPKQ92797 1274 aaKnown RBP18.58■□□□□ 0.56
VPS16-203ENST00000380469 SHISA4Q96DD7 197 aa18.58■□□□□ 0.56
VPS16-203ENST00000380469 ACSBG1Q96GR2 724 aa18.58■□□□□ 0.56
VPS16-203ENST00000380469 MED15Q96RN5 788 aa18.58■□□□□ 0.56
VPS16-203ENST00000380469 AKR1B15C9JRZ8 316 aaPredicted RBP18.57■□□□□ 0.56
VPS16-203ENST00000380469 IGSF3O75054 1194 aa18.57■□□□□ 0.56
VPS16-203ENST00000380469 DDAH1O94760 285 aa18.57■□□□□ 0.56
VPS16-203ENST00000380469 PLEKHA8P1O95397 391 aa18.57■□□□□ 0.56
VPS16-203ENST00000380469 CLCN6P51797 869 aa18.57■□□□□ 0.56
VPS16-203ENST00000380469 TOGARAM2Q6ZUX3 1019 aa18.57■□□□□ 0.56
VPS16-203ENST00000380469 GSDMAQ96QA5 445 aa18.57■□□□□ 0.56
VPS16-203ENST00000380469 CARD6Q9BX69 1037 aa18.57■□□□□ 0.56
VPS16-203ENST00000380469 BCL9LQ86UU0 1499 aa18.57■□□□□ 0.56
VPS16-203ENST00000380469 A0A087X0B3 334 aa18.57■□□□□ 0.56
VPS16-203ENST00000380469 CYP2D7A0A087X1C5 515 aa18.57■□□□□ 0.56
VPS16-203ENST00000380469 SMIM22K7EJ46 135 aa18.57■□□□□ 0.56
VPS16-203ENST00000380469 DDB1Q16531 1140 aa18.57■□□□□ 0.56
VPS16-203ENST00000380469 EARS2Q5JPH6 523 aaKnown RBP18.57■□□□□ 0.56
VPS16-203ENST00000380469 KLHL10Q6JEL2 608 aa18.57■□□□□ 0.56
VPS16-203ENST00000380469 SH3RF1Q7Z6J0 888 aa18.57■□□□□ 0.56
VPS16-203ENST00000380469 PPFIBP1Q86W92 1011 aa18.57■□□□□ 0.56
VPS16-203ENST00000380469 CTAGE1Q96RT6 745 aa18.57■□□□□ 0.56
VPS16-203ENST00000380469 SYNRGQ9UMZ2 1314 aa18.56■□□□□ 0.56
VPS16-203ENST00000380469 TADA3O75528 432 aa18.56■□□□□ 0.56
VPS16-203ENST00000380469 ITPK1Q13572 414 aa18.56■□□□□ 0.56
VPS16-203ENST00000380469 ZNF174Q15697 407 aa18.56■□□□□ 0.56
VPS16-203ENST00000380469 PANX2Q96RD6 677 aa18.56■□□□□ 0.56
VPS16-203ENST00000380469 FGRP09769 529 aa18.56■□□□□ 0.56
VPS16-203ENST00000380469 TROAPQ12815 778 aa18.56■□□□□ 0.56
VPS16-203ENST00000380469 FILIP1LQ4L180 1135 aa18.56■□□□□ 0.56
VPS16-203ENST00000380469 TTC38Q5R3I4 469 aa18.56■□□□□ 0.56
VPS16-203ENST00000380469 BSDC1Q9NW68 430 aaPredicted RBP18.56■□□□□ 0.56
VPS16-203ENST00000380469 MYH2Q9UKX2 1941 aa18.56■□□□□ 0.56
VPS16-203ENST00000380469 LAMB2P55268 1798 aa18.55■□□□□ 0.56
VPS16-203ENST00000380469 FANCGO15287 622 aa18.55■□□□□ 0.56
VPS16-203ENST00000380469 DPYDQ12882 1025 aa18.55■□□□□ 0.56
VPS16-203ENST00000380469 CTR9Q6PD62 1173 aa18.55■□□□□ 0.56
VPS16-203ENST00000380469 TMCO3Q6UWJ1 677 aa18.55■□□□□ 0.56
VPS16-203ENST00000380469 TMTC3Q6ZXV5 915 aa18.55■□□□□ 0.56
VPS16-203ENST00000380469 DUOX1Q9NRD9 1551 aa18.55■□□□□ 0.56
VPS16-203ENST00000380469 STX17P56962 302 aa18.55■□□□□ 0.56
VPS16-203ENST00000380469 MAP3K9P80192 1104 aa18.55■□□□□ 0.56
VPS16-203ENST00000380469 CUL4BQ13620 913 aa18.55■□□□□ 0.56
VPS16-203ENST00000380469 CTCFLQ8NI51 663 aaPredicted RBP18.55■□□□□ 0.56
VPS16-203ENST00000380469 NAA15Q9BXJ9 866 aaKnown RBP18.55■□□□□ 0.56
VPS16-203ENST00000380469 USP17L12C9JPN9 530 aa18.54■□□□□ 0.56
VPS16-203ENST00000380469 USP17L21D6R901 530 aa18.54■□□□□ 0.56
VPS16-203ENST00000380469 SEMA3EO15041 775 aa18.54■□□□□ 0.56
VPS16-203ENST00000380469 CCDC175P0C221 793 aa18.54■□□□□ 0.56
VPS16-203ENST00000380469 CD44P16070 742 aaKnown RBP18.54■□□□□ 0.56
VPS16-203ENST00000380469 IGSF22Q8N9C0 903 aa18.54■□□□□ 0.56
VPS16-203ENST00000380469 WDR24Q96S15 920 aa18.54■□□□□ 0.56
VPS16-203ENST00000380469 CICQ96RK0 1608 aaPredicted RBP18.54■□□□□ 0.56
VPS16-203ENST00000380469 TEX33O43247 280 aa18.54■□□□□ 0.56
VPS16-203ENST00000380469 PTGDRQ13258 359 aa18.54■□□□□ 0.56
VPS16-203ENST00000380469 SF3B3Q15393 1217 aaKnown RBP18.54■□□□□ 0.56
VPS16-203ENST00000380469 TERF2Q15554 542 aa18.54■□□□□ 0.56
VPS16-203ENST00000380469 ERFEQ4G0M1 354 aa18.54■□□□□ 0.56
VPS16-203ENST00000380469 CLEC4GQ6UXB4 293 aa18.54■□□□□ 0.56
VPS16-203ENST00000380469 TNFRSF25Q93038 417 aa18.54■□□□□ 0.56
VPS16-203ENST00000380469 FAM84BQ96KN1 310 aaPredicted RBP18.54■□□□□ 0.56
VPS16-203ENST00000380469 PYM1Q9BRP8 204 aaKnown RBP18.54■□□□□ 0.56
VPS16-203ENST00000380469 CASP1P29466 404 aa18.53■□□□□ 0.56
VPS16-203ENST00000380469 ATP2C1P98194 919 aaPredicted RBP18.53■□□□□ 0.56
VPS16-203ENST00000380469 APTXQ7Z2E3 356 aaKnown RBP18.53■□□□□ 0.56
VPS16-203ENST00000380469 IQUBQ8NA54 791 aa18.53■□□□□ 0.56
VPS16-203ENST00000380469 DESI2Q9BSY9 194 aa18.53■□□□□ 0.56
VPS16-203ENST00000380469 MINPP1Q9UNW1 487 aa18.53■□□□□ 0.56
VPS16-203ENST00000380469 FHOD1Q9Y613 1164 aa18.53■□□□□ 0.56
VPS16-203ENST00000380469 COL1A1P02452 1464 aaPredicted RBP18.53■□□□□ 0.56
VPS16-203ENST00000380469 WTIPA6NIX2 430 aaPredicted RBP18.52■□□□□ 0.56
VPS16-203ENST00000380469 PPP1R3GB7ZBB8 358 aa18.52■□□□□ 0.56
VPS16-203ENST00000380469 NLRP5P59047 1200 aa18.52■□□□□ 0.56
VPS16-203ENST00000380469 RBL2Q08999 1139 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms