RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 V9GY48 417 aaPredicted RBP9.17□□□□□ -0.94
PDLIM5-204ENST00000380176 UBR3Q6ZT12 1888 aa9.17□□□□□ -0.94
PDLIM5-204ENST00000380176 SPATA31A6Q5VVP1 1343 aa9.17□□□□□ -0.94
PDLIM5-204ENST00000380176 FAM237AA0A1B0GTK4 181 aa9.17□□□□□ -0.94
PDLIM5-204ENST00000380176 FOXN1O15353 648 aa9.17□□□□□ -0.94
PDLIM5-204ENST00000380176 NLRP12P59046 1061 aa9.17□□□□□ -0.94
PDLIM5-204ENST00000380176 SAFBQ15424 915 aaKnown RBP eCLIP9.17□□□□□ -0.94
PDLIM5-204ENST00000380176 IQCA1Q86XH1 822 aa9.17□□□□□ -0.94
PDLIM5-204ENST00000380176 FOXP4Q8IVH2 680 aaPredicted RBP9.17□□□□□ -0.94
PDLIM5-204ENST00000380176 CNBD1Q8NA66 436 aa9.17□□□□□ -0.94
PDLIM5-204ENST00000380176 TRAIPQ9BWF2 469 aa9.17□□□□□ -0.94
PDLIM5-204ENST00000380176 RNF26Q9BY78 433 aaPredicted RBP9.17□□□□□ -0.94
PDLIM5-204ENST00000380176 UQCRHLA0A096LP55 91 aa9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 CUTAO60888 179 aa9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 UQCRHP07919 91 aa9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 CDC25BP30305 580 aa9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 TERF1P54274 439 aa9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 PDE4DQ08499 809 aa9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 GRAPQ13588 217 aa9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 DIXDC1Q155Q3 683 aa9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 NOM1Q5C9Z4 860 aaKnown RBP9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 PRR5LQ6MZQ0 368 aa9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 CATIPQ7Z7H3 387 aa9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 METTL16Q86W50 562 aaKnown RBP9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 SEPT12Q8IYM1 358 aa9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 GRAPLQ8TC17 118 aaPredicted RBP9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 MRFAP1L1Q96HT8 127 aa9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 TIGD1Q96MW7 591 aa9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 NAT10Q9H0A0 1025 aaKnown RBP9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 FBXO2Q9UK22 296 aaPredicted RBP9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 AFF2P51816 1311 aa9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 WNT7AO00755 349 aa9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 VEGFAP15692 232 aaPredicted RBP9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 RBM6P78332 1123 aaKnown RBP9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 NCAPHQ15003 741 aa9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 MEX3CQ5U5Q3 659 aaKnown RBP9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 DZIP1Q86YF9 867 aaKnown RBP9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 KRI1Q8N9T8 703 aaKnown RBP9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 ATP8A2Q9NTI2 1148 aa9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 MCM9Q9NXL9 1143 aa9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 KCNH3Q9ULD8 1083 aa9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 ORC4O43929 436 aa9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 ZRSR1Q15695 479 aaKnown RBP9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 RILPL1Q5EBL4 403 aa9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 USP49Q70CQ1 688 aa9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 SRBD1Q8N5C6 995 aaKnown RBP9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 SH3RF3Q8TEJ3 882 aaPredicted RBP9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 PHF20Q9BVI0 1012 aa9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 TUBE1Q9UJT0 475 aa9.16□□□□□ -0.94
PDLIM5-204ENST00000380176 CDK5RAP2Q96SN8 1893 aa9.15□□□□□ -0.94
PDLIM5-204ENST00000380176 ADAMTS3O15072 1205 aa9.15□□□□□ -0.94
PDLIM5-204ENST00000380176 PRPF3O43395 683 aaKnown RBP9.15□□□□□ -0.94
PDLIM5-204ENST00000380176 PTPREP23469 700 aa9.15□□□□□ -0.94
PDLIM5-204ENST00000380176 RCSD1Q6JBY9 416 aa9.15□□□□□ -0.94
PDLIM5-204ENST00000380176 KRBA2Q6ZNG9 492 aa9.15□□□□□ -0.94
PDLIM5-204ENST00000380176 IPO4Q8TEX9 1081 aaKnown RBP9.15□□□□□ -0.94
PDLIM5-204ENST00000380176 DYNLL2Q96FJ2 89 aa9.15□□□□□ -0.94
PDLIM5-204ENST00000380176 MKRN1Q9UHC7 482 aaKnown RBP9.15□□□□□ -0.94
PDLIM5-204ENST00000380176 LDHBP07195 334 aaKnown RBP9.15□□□□□ -0.95
PDLIM5-204ENST00000380176 CHRM1P11229 460 aaPredicted RBP9.15□□□□□ -0.95
PDLIM5-204ENST00000380176 PCP11498 1178 aaKnown RBP9.15□□□□□ -0.95
PDLIM5-204ENST00000380176 GYS1P13807 737 aa9.15□□□□□ -0.95
PDLIM5-204ENST00000380176 GPSM2P81274 684 aa9.15□□□□□ -0.95
PDLIM5-204ENST00000380176 AKAP17AQ02040 695 aaKnown RBP9.15□□□□□ -0.95
PDLIM5-204ENST00000380176 NPY5RQ15761 445 aa9.15□□□□□ -0.95
PDLIM5-204ENST00000380176 SBK1Q52WX2 424 aa9.15□□□□□ -0.95
PDLIM5-204ENST00000380176 TMTC3Q6ZXV5 915 aa9.15□□□□□ -0.95
PDLIM5-204ENST00000380176 FILIP1Q7Z7B0 1213 aa9.15□□□□□ -0.95
PDLIM5-204ENST00000380176 LRRC8AQ8IWT6 810 aa9.15□□□□□ -0.95
PDLIM5-204ENST00000380176 BPIFA3Q9BQP9 254 aa9.15□□□□□ -0.95
PDLIM5-204ENST00000380176 HSD3B7Q9H2F3 369 aa9.15□□□□□ -0.95
PDLIM5-204ENST00000380176 ARPP21Q9UBL0 812 aaPredicted RBP9.15□□□□□ -0.95
PDLIM5-204ENST00000380176 CNTNAP5Q8WYK1 1306 aa9.14□□□□□ -0.95
PDLIM5-204ENST00000380176 BMP6P22004 513 aa9.14□□□□□ -0.95
PDLIM5-204ENST00000380176 MDM2Q00987 491 aaPredicted RBP9.14□□□□□ -0.95
PDLIM5-204ENST00000380176 PPP2R5BQ15173 497 aa9.14□□□□□ -0.95
PDLIM5-204ENST00000380176 CNNM3Q8NE01 707 aa9.14□□□□□ -0.95
PDLIM5-204ENST00000380176 LEMD3Q9Y2U8 911 aa9.14□□□□□ -0.95
PDLIM5-204ENST00000380176 ZBTB12Q9Y330 459 aaPredicted RBP9.14□□□□□ -0.95
PDLIM5-204ENST00000380176 PCDHA5Q9Y5H7 936 aa9.14□□□□□ -0.95
PDLIM5-204ENST00000380176 XDHP47989 1333 aa9.14□□□□□ -0.95
PDLIM5-204ENST00000380176 TSPY2A6NKD2 308 aa9.14□□□□□ -0.95
PDLIM5-204ENST00000380176 POLR2DO15514 142 aaKnown RBP9.14□□□□□ -0.95
PDLIM5-204ENST00000380176 DDAH1O94760 285 aa9.14□□□□□ -0.95
PDLIM5-204ENST00000380176 ATP1A3P13637 1013 aa9.14□□□□□ -0.95
PDLIM5-204ENST00000380176 LMOD1P29536 600 aaPredicted RBP9.14□□□□□ -0.95
PDLIM5-204ENST00000380176 IL17RBQ9NRM6 502 aa9.14□□□□□ -0.95
PDLIM5-204ENST00000380176 RBM28Q9NW13 759 aaKnown RBP9.14□□□□□ -0.95
PDLIM5-204ENST00000380176 PRR29P0C7W0 189 aa9.13□□□□□ -0.95
PDLIM5-204ENST00000380176 KRT2P35908 639 aa9.13□□□□□ -0.95
PDLIM5-204ENST00000380176 C12orf60Q5U649 245 aa9.13□□□□□ -0.95
PDLIM5-204ENST00000380176 SPTY2D1Q68D10 685 aaPredicted RBP9.13□□□□□ -0.95
PDLIM5-204ENST00000380176 GRAMD1CQ8IYS0 662 aa9.13□□□□□ -0.95
PDLIM5-204ENST00000380176 PDILTQ8N807 584 aa9.13□□□□□ -0.95
PDLIM5-204ENST00000380176 WDR66Q8TBY9 1149 aa9.13□□□□□ -0.95
PDLIM5-204ENST00000380176 XPO4Q9C0E2 1151 aaKnown RBP9.13□□□□□ -0.95
PDLIM5-204ENST00000380176 CSRNP2Q9H175 543 aa9.13□□□□□ -0.95
PDLIM5-204ENST00000380176 IFNKQ9P0W0 207 aa9.13□□□□□ -0.95
PDLIM5-204ENST00000380176 SERTAD1Q9UHV2 236 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms