RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 ALDH3A1P30838 453 aa12.16□□□□□ -0.46
LINC00654-201ENST00000379053 IRX5P78411 483 aaPredicted RBP12.16□□□□□ -0.46
LINC00654-201ENST00000379053 ASIC2Q16515 512 aa12.16□□□□□ -0.46
LINC00654-201ENST00000379053 ZNF830Q96NB3 372 aaPredicted RBP12.16□□□□□ -0.46
LINC00654-201ENST00000379053 ATP8A2Q9NTI2 1148 aa12.16□□□□□ -0.46
LINC00654-201ENST00000379053 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.16□□□□□ -0.46
LINC00654-201ENST00000379053 MYCP01106 439 aaPredicted RBP12.16□□□□□ -0.46
LINC00654-201ENST00000379053 CRKLP46109 303 aaKnown RBP12.16□□□□□ -0.46
LINC00654-201ENST00000379053 MYL5Q02045 173 aa12.16□□□□□ -0.46
LINC00654-201ENST00000379053 PHKBQ93100 1093 aa12.16□□□□□ -0.46
LINC00654-201ENST00000379053 TESK2Q96S53 571 aa12.16□□□□□ -0.46
LINC00654-201ENST00000379053 USTQ9Y2C2 406 aa12.16□□□□□ -0.46
LINC00654-201ENST00000379053 NEURL1BA8MQ27 555 aa12.16□□□□□ -0.46
LINC00654-201ENST00000379053 ABI1Q8IZP0 508 aa12.16□□□□□ -0.46
LINC00654-201ENST00000379053 PNMA2Q9UL42 364 aa12.16□□□□□ -0.46
LINC00654-201ENST00000379053 FRMPD2Q68DX3 1309 aaPredicted RBP12.16□□□□□ -0.46
LINC00654-201ENST00000379053 LTKP29376 864 aa12.15□□□□□ -0.46
LINC00654-201ENST00000379053 IGBP1P78318 339 aa12.15□□□□□ -0.46
LINC00654-201ENST00000379053 ZNF569Q5MCW4 686 aa12.15□□□□□ -0.46
LINC00654-201ENST00000379053 TICAM2Q86XR7 235 aa12.15□□□□□ -0.46
LINC00654-201ENST00000379053 LRRC47Q8N1G4 583 aaKnown RBP12.15□□□□□ -0.46
LINC00654-201ENST00000379053 GPR161Q8N6U8 529 aaKnown RBP12.15□□□□□ -0.46
LINC00654-201ENST00000379053 TSGA10Q9BZW7 698 aa12.15□□□□□ -0.46
LINC00654-201ENST00000379053 VPS16Q9H269 839 aa12.15□□□□□ -0.46
LINC00654-201ENST00000379053 RIOK3O14730 519 aaKnown RBP12.15□□□□□ -0.46
LINC00654-201ENST00000379053 GIPC1O14908 333 aa12.15□□□□□ -0.46
LINC00654-201ENST00000379053 GMNNO75496 209 aa12.15□□□□□ -0.46
LINC00654-201ENST00000379053 OSBPP22059 807 aa12.15□□□□□ -0.46
LINC00654-201ENST00000379053 TMOD1P28289 359 aa12.15□□□□□ -0.46
LINC00654-201ENST00000379053 YWHAEP62258 255 aaKnown RBP12.15□□□□□ -0.46
LINC00654-201ENST00000379053 SPATA24Q86W54 205 aa12.15□□□□□ -0.46
LINC00654-201ENST00000379053 TRIM7Q9C029 511 aa12.15□□□□□ -0.46
LINC00654-201ENST00000379053 KCNK9Q9NPC2 374 aa12.15□□□□□ -0.46
LINC00654-201ENST00000379053 SERPINB2P05120 415 aa12.15□□□□□ -0.46
LINC00654-201ENST00000379053 BCAMP50895 628 aa12.15□□□□□ -0.46
LINC00654-201ENST00000379053 CCDC122Q5T0U0 273 aa12.15□□□□□ -0.46
LINC00654-201ENST00000379053 UGGT2Q9NYU1 1516 aa12.15□□□□□ -0.46
LINC00654-201ENST00000379053 OPA1O60313 960 aa12.15□□□□□ -0.46
LINC00654-201ENST00000379053 TTLL7Q6ZT98 887 aa12.15□□□□□ -0.46
LINC00654-201ENST00000379053 CABP7Q86V35 215 aa12.15□□□□□ -0.46
LINC00654-201ENST00000379053 AP5M1Q9H0R1 490 aa12.15□□□□□ -0.46
LINC00654-201ENST00000379053 EIF2AK4Q9P2K8 1649 aaKnown RBP12.15□□□□□ -0.46
LINC00654-201ENST00000379053 ZNF365Q70YC5 407 aa12.15□□□□□ -0.47
LINC00654-201ENST00000379053 PSTPIP2Q9H939 334 aa12.15□□□□□ -0.47
LINC00654-201ENST00000379053 ST7Q9NRC1 585 aa12.15□□□□□ -0.47
LINC00654-201ENST00000379053 PARD3Q8TEW0 1356 aa12.15□□□□□ -0.47
LINC00654-201ENST00000379053 FAM160A1Q05DH4 1040 aa12.14□□□□□ -0.47
LINC00654-201ENST00000379053 CC2D2BQ6DHV5 1058 aa12.14□□□□□ -0.47
LINC00654-201ENST00000379053 SESTD1Q86VW0 696 aa12.14□□□□□ -0.47
LINC00654-201ENST00000379053 ZBTB38Q8NAP3 1195 aaPredicted RBP12.14□□□□□ -0.47
LINC00654-201ENST00000379053 ATRIPQ8WXE1 791 aa12.14□□□□□ -0.47
LINC00654-201ENST00000379053 PLEKHG3A1L390 1219 aa12.14□□□□□ -0.47
LINC00654-201ENST00000379053 POLR2DO15514 142 aaKnown RBP12.14□□□□□ -0.47
LINC00654-201ENST00000379053 ECE1P42892 770 aa12.14□□□□□ -0.47
LINC00654-201ENST00000379053 CHRNDQ07001 517 aa12.14□□□□□ -0.47
LINC00654-201ENST00000379053 IFRD2Q12894 506 aaPredicted RBP12.14□□□□□ -0.47
LINC00654-201ENST00000379053 ABCB5Q2M3G0 1257 aa12.14□□□□□ -0.47
LINC00654-201ENST00000379053 XKR9Q5GH70 373 aa12.14□□□□□ -0.47
LINC00654-201ENST00000379053 NAP1L3Q99457 506 aaPredicted RBP12.14□□□□□ -0.47
LINC00654-201ENST00000379053 CTTNBP2NLQ9P2B4 639 aa12.14□□□□□ -0.47
LINC00654-201ENST00000379053 ZBTB7BO15156 539 aaPredicted RBP12.14□□□□□ -0.47
LINC00654-201ENST00000379053 ATF7P17544 494 aaPredicted RBP12.14□□□□□ -0.47
LINC00654-201ENST00000379053 CLUL1Q15846 466 aa12.14□□□□□ -0.47
LINC00654-201ENST00000379053 PRR16Q569H4 304 aa12.14□□□□□ -0.47
LINC00654-201ENST00000379053 FBXO11Q86XK2 927 aa12.14□□□□□ -0.47
LINC00654-201ENST00000379053 PIM2Q9P1W9 311 aa12.14□□□□□ -0.47
LINC00654-201ENST00000379053 CCPG1Q9ULG6 757 aa12.14□□□□□ -0.47
LINC00654-201ENST00000379053 KCNJ14Q9UNX9 436 aa12.14□□□□□ -0.47
LINC00654-201ENST00000379053 ZNF804BA4D1E1 1349 aa12.14□□□□□ -0.47
LINC00654-201ENST00000379053 RDH13Q8NBN7 331 aa12.14□□□□□ -0.47
LINC00654-201ENST00000379053 IWS1Q96ST2 819 aa12.14□□□□□ -0.47
LINC00654-201ENST00000379053 LLPHQ9BRT6 129 aaKnown RBP12.14□□□□□ -0.47
LINC00654-201ENST00000379053 XDHP47989 1333 aa12.14□□□□□ -0.47
LINC00654-201ENST00000379053 TMEM232C9JQI7 657 aa12.14□□□□□ -0.47
LINC00654-201ENST00000379053 DYNC1I1O14576 645 aa12.14□□□□□ -0.47
LINC00654-201ENST00000379053 ERCC3P19447 782 aa12.14□□□□□ -0.47
LINC00654-201ENST00000379053 MCM6Q14566 821 aa12.14□□□□□ -0.47
LINC00654-201ENST00000379053 NT5C3AQ9H0P0 336 aa12.14□□□□□ -0.47
LINC00654-201ENST00000379053 ARFGAP3Q9NP61 516 aa12.14□□□□□ -0.47
LINC00654-201ENST00000379053 VPS54Q9P1Q0 977 aa12.14□□□□□ -0.47
LINC00654-201ENST00000379053 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.13□□□□□ -0.47
LINC00654-201ENST00000379053 BCRP11274 1271 aa12.13□□□□□ -0.47
LINC00654-201ENST00000379053 LIG4P49917 911 aa12.13□□□□□ -0.47
LINC00654-201ENST00000379053 VAV2P52735 878 aa12.13□□□□□ -0.47
LINC00654-201ENST00000379053 INTS4Q96HW7 963 aaKnown RBP12.13□□□□□ -0.47
LINC00654-201ENST00000379053 PPANQ9NQ55 473 aaKnown RBP12.13□□□□□ -0.47
LINC00654-201ENST00000379053 NPHP4O75161 1426 aaPredicted RBP12.13□□□□□ -0.47
LINC00654-201ENST00000379053 TPD52P55327 224 aaPredicted RBP12.13□□□□□ -0.47
LINC00654-201ENST00000379053 RSPH3Q86UC2 560 aa12.13□□□□□ -0.47
LINC00654-201ENST00000379053 UBL4BQ8N7F7 174 aa12.13□□□□□ -0.47
LINC00654-201ENST00000379053 MMS19Q96T76 1030 aa12.13□□□□□ -0.47
LINC00654-201ENST00000379053 AKR1B15C9JRZ8 316 aaPredicted RBP12.13□□□□□ -0.47
LINC00654-201ENST00000379053 OATP04181 439 aa12.13□□□□□ -0.47
LINC00654-201ENST00000379053 PAK1Q13153 545 aa12.13□□□□□ -0.47
LINC00654-201ENST00000379053 PPP2R5CQ13362 524 aa12.13□□□□□ -0.47
LINC00654-201ENST00000379053 SLFN13Q68D06 897 aa12.13□□□□□ -0.47
LINC00654-201ENST00000379053 CCDC26Q8TAB7 109 aa12.13□□□□□ -0.47
LINC00654-201ENST00000379053 GTF3C6Q969F1 213 aa12.13□□□□□ -0.47
LINC00654-201ENST00000379053 SNX21Q969T3 373 aa12.13□□□□□ -0.47
LINC00654-201ENST00000379053 CSRNP1Q96S65 589 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms