RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 RCN2Q14257 317 aa14.64□□□□□ -0.07
HIPK3-202ENST00000379016 PUM3Q15397 648 aaKnown RBP14.64□□□□□ -0.07
HIPK3-202ENST00000379016 ZNF513Q8N8E2 541 aaPredicted RBP14.64□□□□□ -0.07
HIPK3-202ENST00000379016 EPS15L1Q9UBC2 864 aa14.64□□□□□ -0.07
HIPK3-202ENST00000379016 PARP3Q9Y6F1 533 aa14.64□□□□□ -0.07
HIPK3-202ENST00000379016 USH1GQ495M9 461 aa14.64□□□□□ -0.07
HIPK3-202ENST00000379016 PHLDB3Q6NSJ2 640 aa14.64□□□□□ -0.07
HIPK3-202ENST00000379016 VGLL3A8MV65 326 aa14.64□□□□□ -0.07
HIPK3-202ENST00000379016 GCNT3O95395 438 aa14.64□□□□□ -0.07
HIPK3-202ENST00000379016 CNNM2Q9H8M5 875 aa14.64□□□□□ -0.07
HIPK3-202ENST00000379016 GEMIN8Q9NWZ8 242 aaKnown RBP14.64□□□□□ -0.07
HIPK3-202ENST00000379016 HACD3Q9P035 362 aa14.64□□□□□ -0.07
HIPK3-202ENST00000379016 BNIP3LO60238 219 aa14.63□□□□□ -0.07
HIPK3-202ENST00000379016 HABP4Q5JVS0 413 aaKnown RBP14.63□□□□□ -0.07
HIPK3-202ENST00000379016 RDH13Q8NBN7 331 aa14.63□□□□□ -0.07
HIPK3-202ENST00000379016 TTC1Q99614 292 aa14.63□□□□□ -0.07
HIPK3-202ENST00000379016 TYW5A2RUC4 315 aaKnown RBP14.63□□□□□ -0.07
HIPK3-202ENST00000379016 SNX1Q13596 522 aa14.63□□□□□ -0.07
HIPK3-202ENST00000379016 NCAPH2Q6IBW4 605 aa14.63□□□□□ -0.07
HIPK3-202ENST00000379016 RAB44Q7Z6P3 723 aaPredicted RBP14.63□□□□□ -0.07
HIPK3-202ENST00000379016 SYNDIG1Q9H7V2 258 aa14.63□□□□□ -0.07
HIPK3-202ENST00000379016 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.63□□□□□ -0.07
HIPK3-202ENST00000379016 ARHGAP44Q17R89 818 aa14.63□□□□□ -0.07
HIPK3-202ENST00000379016 RASEFQ8IZ41 740 aa14.63□□□□□ -0.07
HIPK3-202ENST00000379016 MAD1L1Q9Y6D9 718 aa14.63□□□□□ -0.07
HIPK3-202ENST00000379016 BACH2Q9BYV9 841 aa14.63□□□□□ -0.07
HIPK3-202ENST00000379016 PALMDQ9NP74 551 aa14.63□□□□□ -0.07
HIPK3-202ENST00000379016 LMNB1P20700 586 aa14.63□□□□□ -0.07
HIPK3-202ENST00000379016 MAGEB6Q8N7X4 407 aa14.63□□□□□ -0.07
HIPK3-202ENST00000379016 BRF1Q92994 677 aa14.63□□□□□ -0.07
HIPK3-202ENST00000379016 TFCP2L1Q9NZI6 479 aa14.63□□□□□ -0.07
HIPK3-202ENST00000379016 PRPSAP1Q14558 356 aa14.62□□□□□ -0.07
HIPK3-202ENST00000379016 MMTAG2Q9BU76 263 aaKnown RBP14.62□□□□□ -0.07
HIPK3-202ENST00000379016 CPXCR1Q8N123 301 aa14.62□□□□□ -0.07
HIPK3-202ENST00000379016 FBXL13Q8NEE6 735 aa14.62□□□□□ -0.07
HIPK3-202ENST00000379016 MRPS27Q92552 414 aaKnown RBP14.62□□□□□ -0.07
HIPK3-202ENST00000379016 EXOC7Q9UPT5 735 aa14.62□□□□□ -0.07
HIPK3-202ENST00000379016 INPP5FQ9Y2H2 1132 aa14.62□□□□□ -0.07
HIPK3-202ENST00000379016 ANKRD30BQ9BXX2 1392 aa14.62□□□□□ -0.07
HIPK3-202ENST00000379016 P4HA1P13674 534 aa14.62□□□□□ -0.07
HIPK3-202ENST00000379016 ZNF174Q15697 407 aa14.62□□□□□ -0.07
HIPK3-202ENST00000379016 KHDRBS2Q5VWX1 349 aaKnown RBP14.62□□□□□ -0.07
HIPK3-202ENST00000379016 CCDC24Q8N4L8 307 aa14.62□□□□□ -0.07
HIPK3-202ENST00000379016 GDAP1Q8TB36 358 aa14.62□□□□□ -0.07
HIPK3-202ENST00000379016 GNA11P29992 359 aa14.62□□□□□ -0.07
HIPK3-202ENST00000379016 PPP2R5EQ16537 467 aa14.62□□□□□ -0.07
HIPK3-202ENST00000379016 MYCT1Q8N699 235 aa14.62□□□□□ -0.07
HIPK3-202ENST00000379016 EVI5O60447 810 aa14.62□□□□□ -0.07
HIPK3-202ENST00000379016 LMNAP02545 664 aaKnown RBP14.62□□□□□ -0.07
HIPK3-202ENST00000379016 ATF7P17544 494 aaPredicted RBP14.62□□□□□ -0.07
HIPK3-202ENST00000379016 POTEDQ86YR6 584 aa14.62□□□□□ -0.07
HIPK3-202ENST00000379016 EMILIN1Q9Y6C2 1016 aa14.62□□□□□ -0.07
HIPK3-202ENST00000379016 FAM83GA6ND36 823 aa14.62□□□□□ -0.07
HIPK3-202ENST00000379016 UBAP1LF5GYI3 381 aa14.62□□□□□ -0.07
HIPK3-202ENST00000379016 ZNF263O14978 683 aa14.62□□□□□ -0.07
HIPK3-202ENST00000379016 GPC4O75487 556 aa14.62□□□□□ -0.07
HIPK3-202ENST00000379016 RPSAP08865 295 aaKnown RBP14.62□□□□□ -0.07
HIPK3-202ENST00000379016 PHBP35232 272 aa14.62□□□□□ -0.07
HIPK3-202ENST00000379016 EVCP57679 992 aa14.62□□□□□ -0.07
HIPK3-202ENST00000379016 TTBK2Q6IQ55 1244 aa14.62□□□□□ -0.07
HIPK3-202ENST00000379016 NAIPQ13075 1403 aa14.61□□□□□ -0.07
HIPK3-202ENST00000379016 AKR1B15C9JRZ8 316 aaPredicted RBP14.61□□□□□ -0.07
HIPK3-202ENST00000379016 PARP1P09874 1014 aaKnown RBP14.61□□□□□ -0.07
HIPK3-202ENST00000379016 PDE4DQ08499 809 aa14.61□□□□□ -0.07
HIPK3-202ENST00000379016 SLC39A6Q13433 755 aa14.61□□□□□ -0.07
HIPK3-202ENST00000379016 PTPROQ16827 1216 aa14.61□□□□□ -0.07
HIPK3-202ENST00000379016 GLE1Q53GS7 698 aaKnown RBP14.61□□□□□ -0.07
HIPK3-202ENST00000379016 MKL2Q9ULH7 1088 aa14.61□□□□□ -0.07
HIPK3-202ENST00000379016 NBNO60934 754 aa14.61□□□□□ -0.07
HIPK3-202ENST00000379016 ANKRD20A4Q4UJ75 823 aa14.61□□□□□ -0.07
HIPK3-202ENST00000379016 ANKRD20A8PQ5CZ79 823 aa14.61□□□□□ -0.07
HIPK3-202ENST00000379016 ANKRD20A2Q5SQ80 823 aa14.61□□□□□ -0.07
HIPK3-202ENST00000379016 ANKRD20A1Q5TYW2 823 aa14.61□□□□□ -0.07
HIPK3-202ENST00000379016 SMCR8Q8TEV9 937 aaPredicted RBP14.61□□□□□ -0.07
HIPK3-202ENST00000379016 C1orf228Q6PIY5 440 aa14.61□□□□□ -0.07
HIPK3-202ENST00000379016 NLRP9Q7RTR0 991 aa14.61□□□□□ -0.07
HIPK3-202ENST00000379016 TEX9Q8N6V9 391 aa14.61□□□□□ -0.07
HIPK3-202ENST00000379016 VCPP55072 806 aaKnown RBP14.61□□□□□ -0.07
HIPK3-202ENST00000379016 UBE3AQ05086 875 aa14.61□□□□□ -0.07
HIPK3-202ENST00000379016 TBC1D8BQ0IIM8 1120 aa14.61□□□□□ -0.07
HIPK3-202ENST00000379016 DACH2Q96NX9 599 aa14.61□□□□□ -0.07
HIPK3-202ENST00000379016 NSFL1CQ9UNZ2 370 aaKnown RBP14.61□□□□□ -0.07
HIPK3-202ENST00000379016 UQCRFS1P1P0C7P4 283 aa14.61□□□□□ -0.07
HIPK3-202ENST00000379016 VWA3BQ502W6 1294 aa14.61□□□□□ -0.07
HIPK3-202ENST00000379016 NLRP3Q96P20 1036 aa14.61□□□□□ -0.07
HIPK3-202ENST00000379016 ARHGEF9O43307 516 aa14.6□□□□□ -0.07
HIPK3-202ENST00000379016 RNF40O75150 1001 aa14.6□□□□□ -0.07
HIPK3-202ENST00000379016 DDAH1O94760 285 aa14.6□□□□□ -0.07
HIPK3-202ENST00000379016 ESRRGP62508 458 aa14.6□□□□□ -0.07
HIPK3-202ENST00000379016 EFCAB14O75071 495 aa14.6□□□□□ -0.07
HIPK3-202ENST00000379016 ESRRBO95718 433 aa14.6□□□□□ -0.07
HIPK3-202ENST00000379016 U2AF2P26368 475 aaKnown RBP eCLIP14.6□□□□□ -0.073e-13■■■□□ 18
HIPK3-202ENST00000379016 MRPL44Q9H9J2 332 aaKnown RBP14.6□□□□□ -0.07
HIPK3-202ENST00000379016 ATG3Q9NT62 314 aa14.6□□□□□ -0.07
HIPK3-202ENST00000379016 RUFY4Q6ZNE9 571 aa14.6□□□□□ -0.07
HIPK3-202ENST00000379016 TMPOP42166 694 aaKnown RBP14.6□□□□□ -0.07
HIPK3-202ENST00000379016 TAGAPQ8N103 731 aa14.6□□□□□ -0.07
HIPK3-202ENST00000379016 GSDMAQ96QA5 445 aa14.6□□□□□ -0.07
HIPK3-202ENST00000379016 APOL6Q9BWW8 343 aa14.6□□□□□ -0.07
HIPK3-202ENST00000379016 DRC3Q9H069 523 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms