RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 CHRM1P11229 460 aaPredicted RBP9.27□□□□□ -0.93
PTPRR-203ENST00000378778 ARHGAP25P42331 645 aa9.27□□□□□ -0.93
PTPRR-203ENST00000378778 SETQ01105 290 aaPredicted RBP9.27□□□□□ -0.93
PTPRR-203ENST00000378778 TTLL5Q6EMB2 1281 aa9.27□□□□□ -0.93
PTPRR-203ENST00000378778 ISM2Q6H9L7 571 aa9.27□□□□□ -0.93
PTPRR-203ENST00000378778 TTC5Q8N0Z6 440 aa9.27□□□□□ -0.93
PTPRR-203ENST00000378778 ZNHIT6Q9NWK9 470 aaKnown RBP9.27□□□□□ -0.93
PTPRR-203ENST00000378778 RMND1Q9NWS8 449 aa9.27□□□□□ -0.93
PTPRR-203ENST00000378778 SERTAD1Q9UHV2 236 aa9.27□□□□□ -0.93
PTPRR-203ENST00000378778 RWDD2AQ9UIY3 292 aa9.27□□□□□ -0.93
PTPRR-203ENST00000378778 POLR2DO15514 142 aaKnown RBP9.26□□□□□ -0.93
PTPRR-203ENST00000378778 DEXIO95424 95 aa9.26□□□□□ -0.93
PTPRR-203ENST00000378778 PRLRP16471 622 aa9.26□□□□□ -0.93
PTPRR-203ENST00000378778 TNFRSF8P28908 595 aa9.26□□□□□ -0.93
PTPRR-203ENST00000378778 GYS2P54840 703 aa9.26□□□□□ -0.93
PTPRR-203ENST00000378778 GOLGA8FQ08AF8 430 aa9.26□□□□□ -0.93
PTPRR-203ENST00000378778 GOLGA8DPQ0D2H9 430 aa9.26□□□□□ -0.93
PTPRR-203ENST00000378778 NNTQ13423 1086 aa9.26□□□□□ -0.93
PTPRR-203ENST00000378778 SLC9C2Q5TAH2 1124 aa9.26□□□□□ -0.93
PTPRR-203ENST00000378778 ALS2CLQ60I27 953 aa9.26□□□□□ -0.93
PTPRR-203ENST00000378778 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.26□□□□□ -0.93
PTPRR-203ENST00000378778 CHST3Q7LGC8 479 aa9.26□□□□□ -0.93
PTPRR-203ENST00000378778 FNBP4Q8N3X1 1017 aaPredicted RBP9.26□□□□□ -0.93
PTPRR-203ENST00000378778 RETREG2Q8NC44 543 aa9.26□□□□□ -0.93
PTPRR-203ENST00000378778 C1orf131Q8NDD1 294 aaKnown RBP9.26□□□□□ -0.93
PTPRR-203ENST00000378778 STAG1Q8WVM7 1258 aa9.26□□□□□ -0.93
PTPRR-203ENST00000378778 CLIC6Q96NY7 704 aa9.26□□□□□ -0.93
PTPRR-203ENST00000378778 ABHD10Q9NUJ1 306 aa9.26□□□□□ -0.93
PTPRR-203ENST00000378778 TRPM3Q9HCF6 1732 aaPredicted RBP9.26□□□□□ -0.93
PTPRR-203ENST00000378778 UBN2Q6ZU65 1347 aa9.26□□□□□ -0.93
PTPRR-203ENST00000378778 PRAMEF22A3QJZ6 481 aa9.26□□□□□ -0.93
PTPRR-203ENST00000378778 LRRIQ3A6PVS8 624 aaPredicted RBP9.26□□□□□ -0.93
PTPRR-203ENST00000378778 KIF1CO43896 1103 aaKnown RBP9.26□□□□□ -0.93
PTPRR-203ENST00000378778 ERLIN2O94905 339 aa9.26□□□□□ -0.93
PTPRR-203ENST00000378778 GYPCP04921 128 aa9.26□□□□□ -0.93
PTPRR-203ENST00000378778 XBP1P17861 261 aa9.26□□□□□ -0.93
PTPRR-203ENST00000378778 SKOR1P84550 965 aa9.26□□□□□ -0.93
PTPRR-203ENST00000378778 MICALCLQ6ZW33 695 aa9.26□□□□□ -0.93
PTPRR-203ENST00000378778 YTHDF3Q7Z739 585 aaKnown RBP9.26□□□□□ -0.93
PTPRR-203ENST00000378778 NOC3LQ8WTT2 800 aaKnown RBP9.26□□□□□ -0.93
PTPRR-203ENST00000378778 DCAF5Q96JK2 942 aa9.26□□□□□ -0.93
PTPRR-203ENST00000378778 PLA2G12BQ9BX93 195 aa9.26□□□□□ -0.93
PTPRR-203ENST00000378778 TSGA10Q9BZW7 698 aa9.26□□□□□ -0.93
PTPRR-203ENST00000378778 KRT23Q9C075 422 aa9.26□□□□□ -0.93
PTPRR-203ENST00000378778 SAMSN1Q9NSI8 373 aaKnown RBP9.26□□□□□ -0.93
PTPRR-203ENST00000378778 SAR1BQ9Y6B6 198 aa9.26□□□□□ -0.93
PTPRR-203ENST00000378778 SETD1BQ9UPS6 1966 aaKnown RBP9.26□□□□□ -0.93
PTPRR-203ENST00000378778 UBR2Q8IWV8 1755 aa9.26□□□□□ -0.93
PTPRR-203ENST00000378778 MYH8P13535 1937 aa9.26□□□□□ -0.93
PTPRR-203ENST00000378778 GPAA1O43292 621 aa9.25□□□□□ -0.93
PTPRR-203ENST00000378778 RHOXF2BP0C7M4 288 aa9.25□□□□□ -0.93
PTPRR-203ENST00000378778 HOXA7P31268 230 aaPredicted RBP9.25□□□□□ -0.93
PTPRR-203ENST00000378778 TSR1Q2NL82 804 aaKnown RBP9.25□□□□□ -0.93
PTPRR-203ENST00000378778 EMC10Q5UCC4 262 aa9.25□□□□□ -0.93
PTPRR-203ENST00000378778 CCDC170Q8IYT3 715 aa9.25□□□□□ -0.93
PTPRR-203ENST00000378778 IFNL2Q8IZJ0 200 aa9.25□□□□□ -0.93
PTPRR-203ENST00000378778 MMGT1Q8N4V1 131 aa9.25□□□□□ -0.93
PTPRR-203ENST00000378778 IGDCC4Q8TDY8 1250 aa9.25□□□□□ -0.93
PTPRR-203ENST00000378778 RHOXF2Q9BQY4 288 aa9.25□□□□□ -0.93
PTPRR-203ENST00000378778 NUP58Q9BVL2 599 aa9.25□□□□□ -0.93
PTPRR-203ENST00000378778 STRN4Q9NRL3 753 aa9.25□□□□□ -0.93
PTPRR-203ENST00000378778 FAM184BQ9ULE4 1060 aa9.25□□□□□ -0.93
PTPRR-203ENST00000378778 ZC3H4Q9UPT8 1303 aaKnown RBP9.25□□□□□ -0.93
PTPRR-203ENST00000378778 KRT86O43790 486 aa9.25□□□□□ -0.93
PTPRR-203ENST00000378778 N4BP1O75113 896 aaKnown RBP9.25□□□□□ -0.93
PTPRR-203ENST00000378778 MYL6BP14649 208 aa9.25□□□□□ -0.93
PTPRR-203ENST00000378778 CASP14P31944 242 aa9.25□□□□□ -0.93
PTPRR-203ENST00000378778 CDK17Q00537 523 aa9.25□□□□□ -0.93
PTPRR-203ENST00000378778 DDR1Q08345 913 aa9.25□□□□□ -0.93
PTPRR-203ENST00000378778 DPYDQ12882 1025 aa9.25□□□□□ -0.93
PTPRR-203ENST00000378778 MTF1Q14872 753 aa9.25□□□□□ -0.93
PTPRR-203ENST00000378778 SART3Q15020 963 aaKnown RBP9.25□□□□□ -0.93
PTPRR-203ENST00000378778 PLCB4Q15147 1175 aa9.25□□□□□ -0.93
PTPRR-203ENST00000378778 CCNI2Q6ZMN8 369 aaPredicted RBP9.25□□□□□ -0.93
PTPRR-203ENST00000378778 MICALL1Q8N3F8 863 aa9.25□□□□□ -0.93
PTPRR-203ENST00000378778 CCDC155Q8N6L0 562 aa9.25□□□□□ -0.93
PTPRR-203ENST00000378778 LY9Q9HBG7 655 aa9.25□□□□□ -0.93
PTPRR-203ENST00000378778 SLC24A3Q9HC58 644 aa9.25□□□□□ -0.93
PTPRR-203ENST00000378778 EPN1Q9Y6I3 576 aaPredicted RBP9.25□□□□□ -0.93
PTPRR-203ENST00000378778 NDUFB9Q9Y6M9 179 aa9.25□□□□□ -0.93
PTPRR-203ENST00000378778 AKAP11Q9UKA4 1901 aa9.25□□□□□ -0.93
PTPRR-203ENST00000378778 ARAP2Q8WZ64 1704 aa9.24□□□□□ -0.93
PTPRR-203ENST00000378778 H7C1D1 291 aa9.24□□□□□ -0.93
PTPRR-203ENST00000378778 NDUFA10O95299 355 aa9.24□□□□□ -0.93
PTPRR-203ENST00000378778 GCP02774 474 aa9.24□□□□□ -0.93
PTPRR-203ENST00000378778 MYL1P05976 194 aa9.24□□□□□ -0.93
PTPRR-203ENST00000378778 PHKG2P15735 406 aa9.24□□□□□ -0.93
PTPRR-203ENST00000378778 TATP17735 454 aaPredicted RBP9.24□□□□□ -0.93
PTPRR-203ENST00000378778 ADD2P35612 726 aa9.24□□□□□ -0.93
PTPRR-203ENST00000378778 CYLC1P35663 651 aaPredicted RBP9.24□□□□□ -0.93
PTPRR-203ENST00000378778 DRP2Q13474 957 aa9.24□□□□□ -0.93
PTPRR-203ENST00000378778 DIS3L2Q8IYB7 885 aaKnown RBP9.24□□□□□ -0.93
PTPRR-203ENST00000378778 PLCD3Q8N3E9 789 aa9.24□□□□□ -0.93
PTPRR-203ENST00000378778 OR8K1Q8NGG5 319 aa9.24□□□□□ -0.93
PTPRR-203ENST00000378778 RAPGEF4Q8WZA2 1011 aa9.24□□□□□ -0.93
PTPRR-203ENST00000378778 MED15Q96RN5 788 aa9.24□□□□□ -0.93
PTPRR-203ENST00000378778 DNAJC7Q99615 494 aa9.24□□□□□ -0.93
PTPRR-203ENST00000378778 SH3GL2Q99962 352 aa9.24□□□□□ -0.93
PTPRR-203ENST00000378778 GPHNQ9NQX3 736 aaPredicted RBP9.24□□□□□ -0.93
PTPRR-203ENST00000378778 SLC12A7Q9Y666 1083 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms