RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 CCDC125Q86Z20 511 aa22.45■■□□□ 1.18
SSU72-204ENST00000378726 ANKS1AQ92625 1134 aa22.45■■□□□ 1.18
SSU72-204ENST00000378726 RNF26Q9BY78 433 aaPredicted RBP22.45■■□□□ 1.18
SSU72-204ENST00000378726 DYNC1I1O14576 645 aa22.44■■□□□ 1.18
SSU72-204ENST00000378726 LIG1P18858 919 aa22.44■■□□□ 1.18
SSU72-204ENST00000378726 KCNA3P22001 575 aa22.44■■□□□ 1.18
SSU72-204ENST00000378726 CRKP46108 304 aa22.44■■□□□ 1.18
SSU72-204ENST00000378726 GNL2Q13823 731 aaKnown RBP22.44■■□□□ 1.18
SSU72-204ENST00000378726 CTCFLQ8NI51 663 aaPredicted RBP22.44■■□□□ 1.18
SSU72-204ENST00000378726 MRIQ9BWK5 157 aa22.44■■□□□ 1.18
SSU72-204ENST00000378726 KAT14Q9H8E8 782 aa22.44■■□□□ 1.18
SSU72-204ENST00000378726 RTEL1Q9NZ71 1219 aa22.44■■□□□ 1.18
SSU72-204ENST00000378726 WDHD1O75717 1129 aaPredicted RBP22.43■■□□□ 1.18
SSU72-204ENST00000378726 PLEKHA8P1O95397 391 aa22.43■■□□□ 1.18
SSU72-204ENST00000378726 FUT2Q10981 343 aa22.43■■□□□ 1.18
SSU72-204ENST00000378726 CDC42EP5Q6NZY7 148 aa22.43■■□□□ 1.18
SSU72-204ENST00000378726 TTC12Q9H892 705 aaPredicted RBP22.43■■□□□ 1.18
SSU72-204ENST00000378726 NAV1Q8NEY1 1877 aa22.43■■□□□ 1.18
SSU72-204ENST00000378726 PPIP5K2O43314 1243 aa22.43■■□□□ 1.18
SSU72-204ENST00000378726 DDX4Q9NQI0 724 aaKnown RBP22.43■■□□□ 1.18
SSU72-204ENST00000378726 SNED1Q8TER0 1413 aa22.43■■□□□ 1.18
SSU72-204ENST00000378726 GRIPAP1Q4V328 841 aa22.42■■□□□ 1.18
SSU72-204ENST00000378726 BICD2Q8TD16 824 aa22.42■■□□□ 1.18
SSU72-204ENST00000378726 CLIC4Q9Y696 253 aa22.42■■□□□ 1.18
SSU72-204ENST00000378726 V9GY48 417 aaPredicted RBP22.42■■□□□ 1.18
SSU72-204ENST00000378726 PRPF3O43395 683 aaKnown RBP22.42■■□□□ 1.18
SSU72-204ENST00000378726 U2AF2P26368 475 aaKnown RBP eCLIP22.42■■□□□ 1.184e-9■■□□□ 13.4
SSU72-204ENST00000378726 CCDC93Q567U6 631 aa22.42■■□□□ 1.18
SSU72-204ENST00000378726 RTKN2Q8IZC4 609 aa22.42■■□□□ 1.18
SSU72-204ENST00000378726 PIBF1Q8WXW3 757 aa22.42■■□□□ 1.18
SSU72-204ENST00000378726 ZDHHC15Q96MV8 337 aa22.42■■□□□ 1.18
SSU72-204ENST00000378726 KCNJ14Q9UNX9 436 aa22.42■■□□□ 1.18
SSU72-204ENST00000378726 ZBTB7AO95365 584 aa22.41■■□□□ 1.18
SSU72-204ENST00000378726 TMTC3Q6ZXV5 915 aa22.41■■□□□ 1.18
SSU72-204ENST00000378726 C17orf53Q8N3J3 647 aaPredicted RBP22.41■■□□□ 1.18
SSU72-204ENST00000378726 PNMA1Q8ND90 353 aa22.41■■□□□ 1.18
SSU72-204ENST00000378726 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.41■■□□□ 1.18
SSU72-204ENST00000378726 CDK5RAP2Q96SN8 1893 aa22.41■■□□□ 1.18
SSU72-204ENST00000378726 MMP1P03956 469 aa22.41■■□□□ 1.18
SSU72-204ENST00000378726 SAFBQ15424 915 aaKnown RBP eCLIP22.41■■□□□ 1.18
SSU72-204ENST00000378726 POLR3EQ9NVU0 708 aa22.41■■□□□ 1.18
SSU72-204ENST00000378726 STX8Q9UNK0 236 aa22.41■■□□□ 1.18
SSU72-204ENST00000378726 AP5Z1O43299 807 aa22.4■■□□□ 1.18
SSU72-204ENST00000378726 ME1P48163 572 aa22.4■■□□□ 1.18
SSU72-204ENST00000378726 RBM5P52756 815 aaKnown RBP eCLIP22.4■■□□□ 1.18
SSU72-204ENST00000378726 HDLBPQ00341 1268 aaKnown RBP22.4■■□□□ 1.18
SSU72-204ENST00000378726 NOLC1Q14978 699 aaKnown RBP eCLIP22.4■■□□□ 1.18
SSU72-204ENST00000378726 PKN1Q16512 942 aa22.4■■□□□ 1.18
SSU72-204ENST00000378726 DNTTIP2Q5QJE6 756 aaKnown RBP22.4■■□□□ 1.18
SSU72-204ENST00000378726 SRBD1Q8N5C6 995 aaKnown RBP22.4■■□□□ 1.18
SSU72-204ENST00000378726 LINC00301Q8NCQ3 95 aa22.4■■□□□ 1.18
SSU72-204ENST00000378726 NEDD1Q8NHV4 660 aa22.4■■□□□ 1.18
SSU72-204ENST00000378726 MAP7D2Q96T17 732 aa22.4■■□□□ 1.18
SSU72-204ENST00000378726 DACT1Q9NYF0 836 aa22.4■■□□□ 1.18
SSU72-204ENST00000378726 DLEC1Q9Y238 1755 aa22.4■■□□□ 1.18
SSU72-204ENST00000378726 STK38Q15208 465 aa22.39■■□□□ 1.18
SSU72-204ENST00000378726 PCDHAC2Q9Y5I4 1007 aa22.39■■□□□ 1.18
SSU72-204ENST00000378726 hCG_1642624A0A1W2PR95 340 aa22.39■■□□□ 1.17
SSU72-204ENST00000378726 BTBD18B2RXH4 712 aa22.39■■□□□ 1.17
SSU72-204ENST00000378726 KIF5BP33176 963 aa22.39■■□□□ 1.17
SSU72-204ENST00000378726 SF3A1Q15459 793 aaKnown RBP22.39■■□□□ 1.17
SSU72-204ENST00000378726 ATF5Q9Y2D1 282 aaPredicted RBP22.39■■□□□ 1.17
SSU72-204ENST00000378726 YDJCA8MPS7 323 aa22.38■■□□□ 1.17
SSU72-204ENST00000378726 PLCB2Q00722 1185 aa22.38■■□□□ 1.17
SSU72-204ENST00000378726 ANO1Q5XXA6 986 aa22.38■■□□□ 1.17
SSU72-204ENST00000378726 TMEM47Q9BQJ4 181 aa22.38■■□□□ 1.17
SSU72-204ENST00000378726 YEATS4O95619 227 aa22.38■■□□□ 1.17
SSU72-204ENST00000378726 XBP1P17861 261 aa22.38■■□□□ 1.17
SSU72-204ENST00000378726 GABPAQ06546 454 aa22.38■■□□□ 1.17
SSU72-204ENST00000378726 NFIAQ12857 509 aa22.38■■□□□ 1.17
SSU72-204ENST00000378726 DIS3L2Q8IYB7 885 aaKnown RBP22.38■■□□□ 1.17
SSU72-204ENST00000378726 PSMD1Q99460 953 aa22.38■■□□□ 1.17
SSU72-204ENST00000378726 MAP3K14Q99558 947 aa22.38■■□□□ 1.17
SSU72-204ENST00000378726 OSBPL5Q9H0X9 879 aaPredicted RBP22.38■■□□□ 1.17
SSU72-204ENST00000378726 PCDHA7Q9UN72 937 aa22.38■■□□□ 1.17
SSU72-204ENST00000378726 NR1I2O75469 434 aa22.37■■□□□ 1.17
SSU72-204ENST00000378726 CCAR1Q8IX12 1150 aaKnown RBP22.37■■□□□ 1.17
SSU72-204ENST00000378726 KCNG4Q8TDN1 519 aa22.37■■□□□ 1.17
SSU72-204ENST00000378726 MYH1P12882 1939 aa22.37■■□□□ 1.17
SSU72-204ENST00000378726 MYH15Q9Y2K3 1946 aa22.37■■□□□ 1.17
SSU72-204ENST00000378726 SCN9AQ15858 1988 aa22.37■■□□□ 1.17
SSU72-204ENST00000378726 SERPINA10Q9UK55 444 aa22.37■■□□□ 1.17
SSU72-204ENST00000378726 SPTLC2O15270 562 aa22.36■■□□□ 1.17
SSU72-204ENST00000378726 CAMK4Q16566 473 aa22.36■■□□□ 1.17
SSU72-204ENST00000378726 NOSTRINQ8IVI9 506 aa22.36■■□□□ 1.17
SSU72-204ENST00000378726 MYRIPQ8NFW9 859 aa22.36■■□□□ 1.17
SSU72-204ENST00000378726 NUP62CLQ9H1M0 184 aa22.36■■□□□ 1.17
SSU72-204ENST00000378726 FOXP1Q9H334 677 aaPredicted RBP22.36■■□□□ 1.17
SSU72-204ENST00000378726 DDX19AQ9NUU7 478 aaKnown RBP22.36■■□□□ 1.17
SSU72-204ENST00000378726 VPS54Q9P1Q0 977 aa22.36■■□□□ 1.17
SSU72-204ENST00000378726 SERPINB13Q9UIV8 391 aa22.36■■□□□ 1.17
SSU72-204ENST00000378726 CNTNAP5Q8WYK1 1306 aa22.35■■□□□ 1.17
SSU72-204ENST00000378726 ADALQ6DHV7 355 aa22.35■■□□□ 1.17
SSU72-204ENST00000378726 ZNF277Q9NRM2 450 aaPredicted RBP22.35■■□□□ 1.17
SSU72-204ENST00000378726 TGFB2P61812 414 aa22.35■■□□□ 1.17
SSU72-204ENST00000378726 ZFPM1Q8IX07 1006 aa22.35■■□□□ 1.17
SSU72-204ENST00000378726 STAG2Q8N3U4 1231 aa22.35■■□□□ 1.17
SSU72-204ENST00000378726 LARGE2Q8N3Y3 721 aa22.35■■□□□ 1.17
SSU72-204ENST00000378726 PIM2Q9P1W9 311 aa22.35■■□□□ 1.17
SSU72-204ENST00000378726 MTMR7Q9Y216 660 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms