RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 FAM84BQ96KN1 310 aaPredicted RBP22.31■■□□□ 1.16
SHROOM1-202ENST00000378676 BRIP1Q9BX63 1249 aa22.31■■□□□ 1.16
SHROOM1-202ENST00000378676 MINPP1Q9UNW1 487 aa22.31■■□□□ 1.16
SHROOM1-202ENST00000378676 TRIM75PA6NK02 468 aa22.31■■□□□ 1.16
SHROOM1-202ENST00000378676 FANCGO15287 622 aa22.31■■□□□ 1.16
SHROOM1-202ENST00000378676 CCDC93Q567U6 631 aa22.31■■□□□ 1.16
SHROOM1-202ENST00000378676 ZNF397Q8NF99 534 aaPredicted RBP22.31■■□□□ 1.16
SHROOM1-202ENST00000378676 DHX58Q96C10 678 aa22.31■■□□□ 1.16
SHROOM1-202ENST00000378676 BSDC1Q9NW68 430 aaPredicted RBP22.31■■□□□ 1.16
SHROOM1-202ENST00000378676 THRAP3Q9Y2W1 955 aaKnown RBP22.31■■□□□ 1.16
SHROOM1-202ENST00000378676 ZNF831Q5JPB2 1677 aa22.3■■□□□ 1.16
SHROOM1-202ENST00000378676 PRPF3O43395 683 aaKnown RBP22.3■■□□□ 1.16
SHROOM1-202ENST00000378676 SF3B3Q15393 1217 aaKnown RBP22.3■■□□□ 1.16
SHROOM1-202ENST00000378676 CTR9Q6PD62 1173 aa22.3■■□□□ 1.16
SHROOM1-202ENST00000378676 SMIM5Q71RC9 77 aa22.3■■□□□ 1.16
SHROOM1-202ENST00000378676 REXO1L1PQ8IX06 675 aa22.3■■□□□ 1.16
SHROOM1-202ENST00000378676 SPATA20Q8TB22 786 aa22.3■■□□□ 1.16
SHROOM1-202ENST00000378676 ENOX1Q8TC92 643 aaKnown RBP22.3■■□□□ 1.16
SHROOM1-202ENST00000378676 EPSTI1Q96J88 318 aa22.3■■□□□ 1.16
SHROOM1-202ENST00000378676 V9GY48 417 aaPredicted RBP22.3■■□□□ 1.16
SHROOM1-202ENST00000378676 TROAPQ12815 778 aa22.3■■□□□ 1.16
SHROOM1-202ENST00000378676 PPP2R5BQ15173 497 aa22.3■■□□□ 1.16
SHROOM1-202ENST00000378676 FBXO38Q6PIJ6 1188 aa22.3■■□□□ 1.16
SHROOM1-202ENST00000378676 TRIM65Q6PJ69 517 aa22.3■■□□□ 1.16
SHROOM1-202ENST00000378676 CATIPQ7Z7H3 387 aa22.3■■□□□ 1.16
SHROOM1-202ENST00000378676 HOMER1Q86YM7 354 aa22.3■■□□□ 1.16
SHROOM1-202ENST00000378676 LINC00116Q8NCU8 138 aa22.3■■□□□ 1.16
SHROOM1-202ENST00000378676 CERKQ8TCT0 537 aa22.3■■□□□ 1.16
SHROOM1-202ENST00000378676 SAMSN1Q9NSI8 373 aaKnown RBP22.3■■□□□ 1.16
SHROOM1-202ENST00000378676 AATFQ9NY61 560 aaKnown RBP eCLIP22.3■■□□□ 1.16
SHROOM1-202ENST00000378676 CASP1P29466 404 aa22.29■■□□□ 1.16
SHROOM1-202ENST00000378676 NPY5RQ15761 445 aa22.29■■□□□ 1.16
SHROOM1-202ENST00000378676 CAVIN4Q5BKX8 364 aa22.29■■□□□ 1.16
SHROOM1-202ENST00000378676 TRIML1Q8N9V2 468 aa22.29■■□□□ 1.16
SHROOM1-202ENST00000378676 DDX41Q9UJV9 622 aaKnown RBP22.29■■□□□ 1.16
SHROOM1-202ENST00000378676 CNTNAP5Q8WYK1 1306 aa22.29■■□□□ 1.16
SHROOM1-202ENST00000378676 KCNQ4P56696 695 aa22.28■■□□□ 1.16
SHROOM1-202ENST00000378676 ETF1P62495 437 aaKnown RBP22.28■■□□□ 1.16
SHROOM1-202ENST00000378676 BICDL1Q6ZP65 573 aa22.28■■□□□ 1.16
SHROOM1-202ENST00000378676 OGFRQ9NZT2 677 aa22.28■■□□□ 1.16
SHROOM1-202ENST00000378676 DACH1Q9UI36 760 aa22.28■■□□□ 1.16
SHROOM1-202ENST00000378676 DNAI1Q9UI46 699 aa22.28■■□□□ 1.16
SHROOM1-202ENST00000378676 FGRP09769 529 aa22.28■■□□□ 1.16
SHROOM1-202ENST00000378676 XBP1P17861 261 aa22.28■■□□□ 1.16
SHROOM1-202ENST00000378676 PLCD1P51178 756 aa22.28■■□□□ 1.16
SHROOM1-202ENST00000378676 TNFRSF25Q93038 417 aa22.28■■□□□ 1.16
SHROOM1-202ENST00000378676 PHLPP2Q6ZVD8 1323 aa22.28■■□□□ 1.16
SHROOM1-202ENST00000378676 USP17L12C9JPN9 530 aa22.27■■□□□ 1.16
SHROOM1-202ENST00000378676 USP17L21D6R901 530 aa22.27■■□□□ 1.16
SHROOM1-202ENST00000378676 NMT2O60551 498 aa22.27■■□□□ 1.16
SHROOM1-202ENST00000378676 CLEC4GQ6UXB4 293 aa22.27■■□□□ 1.16
SHROOM1-202ENST00000378676 TMTC3Q6ZXV5 915 aa22.27■■□□□ 1.16
SHROOM1-202ENST00000378676 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.27■■□□□ 1.16
SHROOM1-202ENST00000378676 COL24A1Q17RW2 1714 aa22.27■■□□□ 1.16
SHROOM1-202ENST00000378676 NPHP1O15259 732 aa22.27■■□□□ 1.16
SHROOM1-202ENST00000378676 CCP110O43303 1012 aa22.27■■□□□ 1.16
SHROOM1-202ENST00000378676 AFMP43652 599 aa22.27■■□□□ 1.16
SHROOM1-202ENST00000378676 KANK3Q6NY19 840 aa22.27■■□□□ 1.16
SHROOM1-202ENST00000378676 IQCA1Q86XH1 822 aa22.27■■□□□ 1.16
SHROOM1-202ENST00000378676 TC2NQ8N9U0 490 aa22.27■■□□□ 1.16
SHROOM1-202ENST00000378676 SYMPKQ92797 1274 aaKnown RBP22.27■■□□□ 1.16
SHROOM1-202ENST00000378676 NSUN4Q96CB9 384 aaKnown RBP22.27■■□□□ 1.16
SHROOM1-202ENST00000378676 RBM28Q9NW13 759 aaKnown RBP22.27■■□□□ 1.16
SHROOM1-202ENST00000378676 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.27■■□□□ 1.16
SHROOM1-202ENST00000378676 MORC2Q9Y6X9 1032 aaPredicted RBP22.27■■□□□ 1.16
SHROOM1-202ENST00000378676 SBF2Q86WG5 1849 aa22.27■■□□□ 1.16
SHROOM1-202ENST00000378676 SPATA31A5Q5VU36 1347 aa22.26■■□□□ 1.15
SHROOM1-202ENST00000378676 SPATA31A7Q8IWB4 1347 aa22.26■■□□□ 1.15
SHROOM1-202ENST00000378676 CDK11BP21127 795 aaKnown RBP22.26■■□□□ 1.15
SHROOM1-202ENST00000378676 CD44P16070 742 aaKnown RBP22.26■■□□□ 1.15
SHROOM1-202ENST00000378676 ERCC6LQ2NKX8 1250 aa22.26■■□□□ 1.15
SHROOM1-202ENST00000378676 VWA3AA6NCI4 1184 aa22.25■■□□□ 1.15
SHROOM1-202ENST00000378676 ARHGAP6O43182 974 aa22.25■■□□□ 1.15
SHROOM1-202ENST00000378676 ADKP55263 362 aaKnown RBP22.25■■□□□ 1.15
SHROOM1-202ENST00000378676 MECOMQ03112 1051 aa22.25■■□□□ 1.15
SHROOM1-202ENST00000378676 ZNF174Q15697 407 aa22.25■■□□□ 1.15
SHROOM1-202ENST00000378676 SPECC1LQ69YQ0 1117 aa22.25■■□□□ 1.15
SHROOM1-202ENST00000378676 SH3RF1Q7Z6J0 888 aa22.25■■□□□ 1.15
SHROOM1-202ENST00000378676 FCHSD1Q86WN1 690 aa22.25■■□□□ 1.15
SHROOM1-202ENST00000378676 SRBD1Q8N5C6 995 aaKnown RBP22.25■■□□□ 1.15
SHROOM1-202ENST00000378676 PPP2R2CQ9Y2T4 447 aa22.25■■□□□ 1.15
SHROOM1-202ENST00000378676 DDAH1O94760 285 aa22.25■■□□□ 1.15
SHROOM1-202ENST00000378676 TUBB4AP04350 444 aa22.25■■□□□ 1.15
SHROOM1-202ENST00000378676 CYP2D6P10635 497 aa22.25■■□□□ 1.15
SHROOM1-202ENST00000378676 TBC1D9BQ66K14 1250 aa22.25■■□□□ 1.15
SHROOM1-202ENST00000378676 FBXO33Q7Z6M2 555 aa22.25■■□□□ 1.15
SHROOM1-202ENST00000378676 PAGE5Q96GU1 130 aa22.25■■□□□ 1.15
SHROOM1-202ENST00000378676 NOL10Q9BSC4 688 aaKnown RBP22.25■■□□□ 1.15
SHROOM1-202ENST00000378676 ADAMTS3O15072 1205 aa22.24■■□□□ 1.15
SHROOM1-202ENST00000378676 FAM47AQ5JRC9 791 aa22.24■■□□□ 1.15
SHROOM1-202ENST00000378676 SMARCC1Q92922 1105 aaPredicted RBP22.24■■□□□ 1.15
SHROOM1-202ENST00000378676 BAG1Q99933 345 aaPredicted RBP22.24■■□□□ 1.15
SHROOM1-202ENST00000378676 MYH8P13535 1937 aa22.24■■□□□ 1.15
SHROOM1-202ENST00000378676 SLFN14P0C7P3 912 aa22.24■■□□□ 1.15
SHROOM1-202ENST00000378676 CALM1P0DP23 149 aa22.24■■□□□ 1.15
SHROOM1-202ENST00000378676 CALM2P0DP24 149 aa22.24■■□□□ 1.15
SHROOM1-202ENST00000378676 CALM3P0DP25 149 aa22.24■■□□□ 1.15
SHROOM1-202ENST00000378676 TTC38Q5R3I4 469 aa22.24■■□□□ 1.15
SHROOM1-202ENST00000378676 TFCP2L1Q9NZI6 479 aa22.24■■□□□ 1.15
SHROOM1-202ENST00000378676 ERCC5P28715 1186 aaPredicted RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms