RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 AMOTL2Q9Y2J4 779 aa13.08□□□□□ -0.32
NPHP4-202ENST00000378161 RBM8AQ9Y5S9 174 aaKnown RBP13.08□□□□□ -0.32
NPHP4-202ENST00000378161 ANKRD33BA6NCL7 494 aa13.08□□□□□ -0.32
NPHP4-202ENST00000378161 ALDH3A1P30838 453 aa13.08□□□□□ -0.32
NPHP4-202ENST00000378161 KCNJ6P48051 423 aa13.08□□□□□ -0.32
NPHP4-202ENST00000378161 TRIM22Q8IYM9 498 aa13.08□□□□□ -0.32
NPHP4-202ENST00000378161 OSBPL5Q9H0X9 879 aaPredicted RBP13.08□□□□□ -0.32
NPHP4-202ENST00000378161 FESP07332 822 aa13.08□□□□□ -0.32
NPHP4-202ENST00000378161 SCNN1BP51168 640 aa13.08□□□□□ -0.32
NPHP4-202ENST00000378161 FKBP4Q02790 459 aaKnown RBP eCLIP13.08□□□□□ -0.32
NPHP4-202ENST00000378161 C1QTNF12Q5T7M4 302 aa13.08□□□□□ -0.32
NPHP4-202ENST00000378161 TBC1D1Q86TI0 1168 aaPredicted RBP13.08□□□□□ -0.32
NPHP4-202ENST00000378161 NEK1Q96PY6 1258 aa13.08□□□□□ -0.32
NPHP4-202ENST00000378161 NACA2Q9H009 215 aa13.08□□□□□ -0.32
NPHP4-202ENST00000378161 MAP3K2Q9Y2U5 619 aa13.08□□□□□ -0.32
NPHP4-202ENST00000378161 PIP4K2AP48426 406 aaPredicted RBP13.07□□□□□ -0.32
NPHP4-202ENST00000378161 SLC4A8Q2Y0W8 1093 aa13.07□□□□□ -0.32
NPHP4-202ENST00000378161 KCTD16Q68DU8 428 aa13.07□□□□□ -0.32
NPHP4-202ENST00000378161 RBM41Q96IZ5 413 aaKnown RBP13.07□□□□□ -0.32
NPHP4-202ENST00000378161 TUBA8Q9NY65 449 aaPredicted RBP13.07□□□□□ -0.32
NPHP4-202ENST00000378161 HDAC6Q9UBN7 1215 aa13.07□□□□□ -0.32
NPHP4-202ENST00000378161 EDC4Q6P2E9 1401 aaKnown RBP13.07□□□□□ -0.32
NPHP4-202ENST00000378161 LRRIQ3A6PVS8 624 aaPredicted RBP13.07□□□□□ -0.32
NPHP4-202ENST00000378161 CUTAO60888 179 aa13.07□□□□□ -0.32
NPHP4-202ENST00000378161 ANP32DO95626 131 aa13.07□□□□□ -0.32
NPHP4-202ENST00000378161 MORC4Q8TE76 937 aa13.07□□□□□ -0.32
NPHP4-202ENST00000378161 SREK1Q8WXA9 508 aaKnown RBP13.07□□□□□ -0.32
NPHP4-202ENST00000378161 SPATA7Q9P0W8 599 aa13.07□□□□□ -0.32
NPHP4-202ENST00000378161 CFAP65Q6ZU64 1925 aaKnown RBP13.07□□□□□ -0.32
NPHP4-202ENST00000378161 ALDH1L1O75891 902 aa13.07□□□□□ -0.32
NPHP4-202ENST00000378161 CABP4P57796 275 aa13.07□□□□□ -0.32
NPHP4-202ENST00000378161 MPRIPQ6WCQ1 1025 aa13.07□□□□□ -0.32
NPHP4-202ENST00000378161 MAP7D3Q8IWC1 876 aa13.07□□□□□ -0.32
NPHP4-202ENST00000378161 SMCR8Q8TEV9 937 aaPredicted RBP13.07□□□□□ -0.32
NPHP4-202ENST00000378161 EXOC1Q9NV70 894 aa13.07□□□□□ -0.32
NPHP4-202ENST00000378161 L1RE1Q9UN81 338 aa13.07□□□□□ -0.32
NPHP4-202ENST00000378161 ANKRD24Q8TF21 1146 aa13.06□□□□□ -0.32
NPHP4-202ENST00000378161 ABCF2Q9UG63 623 aa13.06□□□□□ -0.32
NPHP4-202ENST00000378161 TTF2Q9UNY4 1162 aaKnown RBP13.06□□□□□ -0.32
NPHP4-202ENST00000378161 BZW2Q9Y6E2 419 aaKnown RBP13.06□□□□□ -0.32
NPHP4-202ENST00000378161 FLT4P35916 1363 aa13.06□□□□□ -0.32
NPHP4-202ENST00000378161 AOX1Q06278 1338 aa13.06□□□□□ -0.32
NPHP4-202ENST00000378161 MAP2K7O14733 419 aa13.06□□□□□ -0.32
NPHP4-202ENST00000378161 C8orf76Q96K31 380 aa13.06□□□□□ -0.32
NPHP4-202ENST00000378161 NR1H4Q96RI1 486 aaPredicted RBP13.06□□□□□ -0.32
NPHP4-202ENST00000378161 EPAS1Q99814 870 aa13.06□□□□□ -0.32
NPHP4-202ENST00000378161 TSC22D4Q9Y3Q8 395 aa13.06□□□□□ -0.32
NPHP4-202ENST00000378161 MYO5CQ9NQX4 1742 aa13.06□□□□□ -0.32
NPHP4-202ENST00000378161 LSM1O15116 133 aaKnown RBP13.06□□□□□ -0.32
NPHP4-202ENST00000378161 MARCH6O60337 910 aa13.06□□□□□ -0.32
NPHP4-202ENST00000378161 ZNF202O95125 648 aa13.06□□□□□ -0.32
NPHP4-202ENST00000378161 PDE1CQ14123 709 aaPredicted RBP13.06□□□□□ -0.32
NPHP4-202ENST00000378161 CFAP157Q5JU67 520 aa13.06□□□□□ -0.32
NPHP4-202ENST00000378161 TTC6Q86TZ1 520 aa13.06□□□□□ -0.32
NPHP4-202ENST00000378161 HVCN1Q96D96 273 aa13.06□□□□□ -0.32
NPHP4-202ENST00000378161 CCDC113Q9H0I3 377 aa13.06□□□□□ -0.32
NPHP4-202ENST00000378161 STIM2Q9P246 746 aa13.06□□□□□ -0.32
NPHP4-202ENST00000378161 FAF1Q9UNN5 650 aaPredicted RBP13.06□□□□□ -0.32
NPHP4-202ENST00000378161 PREX2Q70Z35 1606 aa13.06□□□□□ -0.32
NPHP4-202ENST00000378161 SMIM23A6NLE4 172 aa13.06□□□□□ -0.32
NPHP4-202ENST00000378161 VSNL1P62760 191 aa13.06□□□□□ -0.32
NPHP4-202ENST00000378161 APBA1Q02410 837 aa13.06□□□□□ -0.32
NPHP4-202ENST00000378161 TSGA10IPQ3SY00 556 aa13.06□□□□□ -0.32
NPHP4-202ENST00000378161 DDX46Q7L014 1031 aaKnown RBP13.06□□□□□ -0.32
NPHP4-202ENST00000378161 TMCO5AQ8N6Q1 288 aa13.06□□□□□ -0.32
NPHP4-202ENST00000378161 PARP3Q9Y6F1 533 aa13.06□□□□□ -0.32
NPHP4-202ENST00000378161 ADCY10Q96PN6 1610 aa13.05□□□□□ -0.32
NPHP4-202ENST00000378161 SUPT3HO75486 399 aa13.05□□□□□ -0.32
NPHP4-202ENST00000378161 BZW1Q7L1Q6 419 aaKnown RBP13.05□□□□□ -0.32
NPHP4-202ENST00000378161 G2E3Q7L622 706 aa13.05□□□□□ -0.32
NPHP4-202ENST00000378161 CCDC197Q8NCU1 140 aa13.05□□□□□ -0.32
NPHP4-202ENST00000378161 HIC2Q96JB3 615 aa13.05□□□□□ -0.32
NPHP4-202ENST00000378161 PHF23Q9BUL5 403 aaPredicted RBP13.05□□□□□ -0.32
NPHP4-202ENST00000378161 DNAAF2Q9NVR5 837 aaKnown RBP13.05□□□□□ -0.32
NPHP4-202ENST00000378161 C15orf41Q9Y2V0 281 aa13.05□□□□□ -0.32
NPHP4-202ENST00000378161 POLR1AO95602 1720 aaPredicted RBP13.05□□□□□ -0.32
NPHP4-202ENST00000378161 B4DLN1 442 aa13.05□□□□□ -0.32
NPHP4-202ENST00000378161 SPECC1L-ADORA2AF8WAN1 911 aa13.05□□□□□ -0.32
NPHP4-202ENST00000378161 LEO1Q8WVC0 666 aaPredicted RBP13.05□□□□□ -0.32
NPHP4-202ENST00000378161 RABL2BQ9UNT1 228 aa13.05□□□□□ -0.32
NPHP4-202ENST00000378161 DCAF8L1A6NGE4 600 aa13.05□□□□□ -0.32
NPHP4-202ENST00000378161 HMGB1P1B2RPK0 211 aaPredicted RBP13.05□□□□□ -0.32
NPHP4-202ENST00000378161 USP5P45974 858 aa13.05□□□□□ -0.32
NPHP4-202ENST00000378161 KLC1Q07866 573 aa13.05□□□□□ -0.32
NPHP4-202ENST00000378161 DMPKQ09013 629 aa13.05□□□□□ -0.32
NPHP4-202ENST00000378161 INAQ16352 499 aa13.05□□□□□ -0.32
NPHP4-202ENST00000378161 NLRP14Q86W24 1093 aa13.05□□□□□ -0.32
NPHP4-202ENST00000378161 MYD88Q99836 296 aa13.05□□□□□ -0.32
NPHP4-202ENST00000378161 KIAA0232Q92628 1395 aa13.05□□□□□ -0.32
NPHP4-202ENST00000378161 N4BP3O15049 544 aa13.04□□□□□ -0.32
NPHP4-202ENST00000378161 ATP5JP18859 108 aa13.04□□□□□ -0.32
NPHP4-202ENST00000378161 COG7P83436 770 aa13.04□□□□□ -0.32
NPHP4-202ENST00000378161 IFI16Q16666 785 aaKnown RBP13.04□□□□□ -0.32
NPHP4-202ENST00000378161 FAM173BQ6P4H8 233 aa13.04□□□□□ -0.32
NPHP4-202ENST00000378161 VPS37DQ86XT2 251 aa13.04□□□□□ -0.32
NPHP4-202ENST00000378161 IWS1Q96ST2 819 aa13.04□□□□□ -0.32
NPHP4-202ENST00000378161 DESI2Q9BSY9 194 aa13.04□□□□□ -0.32
NPHP4-202ENST00000378161 CHPF2Q9P2E5 772 aa13.04□□□□□ -0.32
NPHP4-202ENST00000378161 GUCA1BQ9UMX6 200 aa13.04□□□□□ -0.32
NPHP4-202ENST00000378161 PHF8Q9UPP1 1060 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms