RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 ERCC5P28715 1186 aaPredicted RBP20.46■□□□□ 0.87
GNE-201ENST00000377902 ALX1Q15699 326 aa20.46■□□□□ 0.87
GNE-201ENST00000377902 KIF4BQ2VIQ3 1234 aa20.46■□□□□ 0.87
GNE-201ENST00000377902 SLC35F6Q8N357 371 aa20.46■□□□□ 0.87
GNE-201ENST00000377902 MAP2K7O14733 419 aa20.46■□□□□ 0.87
GNE-201ENST00000377902 KIF5CO60282 957 aa20.46■□□□□ 0.87
GNE-201ENST00000377902 PBX1P40424 430 aa20.46■□□□□ 0.87
GNE-201ENST00000377902 BEND6Q5SZJ8 279 aaPredicted RBP20.46■□□□□ 0.87
GNE-201ENST00000377902 BLZF1Q9H2G9 400 aa20.46■□□□□ 0.87
GNE-201ENST00000377902 CDC23Q9UJX2 597 aa20.46■□□□□ 0.87
GNE-201ENST00000377902 MFAP3LO75121 409 aa20.45■□□□□ 0.86
GNE-201ENST00000377902 ZSCAN26Q16670 478 aa20.45■□□□□ 0.86
GNE-201ENST00000377902 MAP3K15Q6ZN16 1313 aa20.45■□□□□ 0.86
GNE-201ENST00000377902 ZNF654Q8IZM8 581 aa20.45■□□□□ 0.86
GNE-201ENST00000377902 WDR17Q8IZU2 1322 aa20.45■□□□□ 0.86
GNE-201ENST00000377902 KRT23Q9C075 422 aa20.45■□□□□ 0.86
GNE-201ENST00000377902 TMOD3Q9NYL9 352 aa20.45■□□□□ 0.86
GNE-201ENST00000377902 LCMT1Q9UIC8 334 aa20.45■□□□□ 0.86
GNE-201ENST00000377902 PPP1R3GB7ZBB8 358 aa20.45■□□□□ 0.86
GNE-201ENST00000377902 NKX1-1Q15270 411 aaPredicted RBP20.45■□□□□ 0.86
GNE-201ENST00000377902 ABCB6Q9NP58 842 aa20.45■□□□□ 0.86
GNE-201ENST00000377902 LRP6O75581 1613 aa20.45■□□□□ 0.86
GNE-201ENST00000377902 CNNM2Q9H8M5 875 aa20.44■□□□□ 0.86
GNE-201ENST00000377902 VPS18Q9P253 973 aa20.44■□□□□ 0.86
GNE-201ENST00000377902 TNS3Q68CZ2 1445 aa20.44■□□□□ 0.86
GNE-201ENST00000377902 SPATA31A3Q5VYP0 1347 aa20.44■□□□□ 0.86
GNE-201ENST00000377902 PARP4Q9UKK3 1724 aaKnown RBP20.44■□□□□ 0.86
GNE-201ENST00000377902 IL2RBP14784 551 aa20.44■□□□□ 0.86
GNE-201ENST00000377902 ERVK-24P63145 666 aa20.44■□□□□ 0.86
GNE-201ENST00000377902 MAP3K12Q12852 859 aa20.44■□□□□ 0.86
GNE-201ENST00000377902 ZNF174Q15697 407 aa20.44■□□□□ 0.86
GNE-201ENST00000377902 CDKAL1Q5VV42 579 aa20.44■□□□□ 0.86
GNE-201ENST00000377902 KANK3Q6NY19 840 aa20.44■□□□□ 0.86
GNE-201ENST00000377902 RASGRP2Q7LDG7 609 aa20.44■□□□□ 0.86
GNE-201ENST00000377902 CTNND2Q9UQB3 1225 aa20.44■□□□□ 0.86
GNE-201ENST00000377902 MINDY4BA8MYZ0 360 aa20.43■□□□□ 0.86
GNE-201ENST00000377902 SDR42E1Q8WUS8 393 aa20.43■□□□□ 0.86
GNE-201ENST00000377902 PIGBQ92521 554 aa20.43■□□□□ 0.86
GNE-201ENST00000377902 VPS16Q9H269 839 aa20.43■□□□□ 0.86
GNE-201ENST00000377902 IQSEC3Q9UPP2 1182 aaPredicted RBP20.43■□□□□ 0.86
GNE-201ENST00000377902 TNS2Q63HR2 1409 aa20.43■□□□□ 0.86
GNE-201ENST00000377902 ERICH2A1L162 156 aa20.43■□□□□ 0.86
GNE-201ENST00000377902 UQCRFS1P1P0C7P4 283 aa20.43■□□□□ 0.86
GNE-201ENST00000377902 BRD3Q15059 726 aa20.43■□□□□ 0.86
GNE-201ENST00000377902 PUM3Q15397 648 aaKnown RBP20.43■□□□□ 0.86
GNE-201ENST00000377902 STAG1Q8WVM7 1258 aa20.43■□□□□ 0.86
GNE-201ENST00000377902 LPIN2Q92539 896 aa20.43■□□□□ 0.86
GNE-201ENST00000377902 TRIM75PA6NK02 468 aa20.42■□□□□ 0.86
GNE-201ENST00000377902 BCAMP50895 628 aa20.42■□□□□ 0.86
GNE-201ENST00000377902 VSNL1P62760 191 aa20.42■□□□□ 0.86
GNE-201ENST00000377902 GPS2Q13227 327 aa20.42■□□□□ 0.86
GNE-201ENST00000377902 SART3Q15020 963 aaKnown RBP20.42■□□□□ 0.86
GNE-201ENST00000377902 JAKMIP3Q5VZ66 844 aa20.42■□□□□ 0.86
GNE-201ENST00000377902 FEZ2Q9UHY8 353 aaPredicted RBP20.42■□□□□ 0.86
GNE-201ENST00000377902 CEP131Q9UPN4 1083 aa20.42■□□□□ 0.86
GNE-201ENST00000377902 MAPK8IP1Q9UQF2 711 aa20.42■□□□□ 0.86
GNE-201ENST00000377902 CDHR2Q9BYE9 1310 aa20.42■□□□□ 0.86
GNE-201ENST00000377902 FGFR2P21802 821 aa20.42■□□□□ 0.86
GNE-201ENST00000377902 PKN1Q16512 942 aa20.42■□□□□ 0.86
GNE-201ENST00000377902 SH3RF1Q7Z6J0 888 aa20.42■□□□□ 0.86
GNE-201ENST00000377902 AATFQ9NY61 560 aaKnown RBP eCLIP20.42■□□□□ 0.86
GNE-201ENST00000377902 TRIM10Q9UDY6 481 aa20.42■□□□□ 0.86
GNE-201ENST00000377902 MYH8P13535 1937 aa20.42■□□□□ 0.86
GNE-201ENST00000377902 ZNF142P52746 1687 aaPredicted RBP20.42■□□□□ 0.86
GNE-201ENST00000377902 CHD4Q14839 1912 aa20.42■□□□□ 0.86
GNE-201ENST00000377902 CTAGE9A4FU28 777 aa20.41■□□□□ 0.86
GNE-201ENST00000377902 TFR2Q9UP52 801 aa20.41■□□□□ 0.86
GNE-201ENST00000377902 TRIM66O15016 1216 aa20.41■□□□□ 0.86
GNE-201ENST00000377902 PHACTR2O75167 634 aa20.41■□□□□ 0.86
GNE-201ENST00000377902 PLEKHA8P1O95397 391 aa20.41■□□□□ 0.86
GNE-201ENST00000377902 ADGRA1Q86SQ6 560 aa20.41■□□□□ 0.86
GNE-201ENST00000377902 NOA1Q8NC60 698 aaKnown RBP20.41■□□□□ 0.86
GNE-201ENST00000377902 V9GY48 417 aaPredicted RBP20.41■□□□□ 0.86
GNE-201ENST00000377902 KRT31Q15323 416 aa20.41■□□□□ 0.86
GNE-201ENST00000377902 NCAPH2Q6IBW4 605 aa20.41■□□□□ 0.86
GNE-201ENST00000377902 CEP112Q8N8E3 955 aa20.41■□□□□ 0.86
GNE-201ENST00000377902 SLF1Q9BQI6 1058 aa20.41■□□□□ 0.86
GNE-201ENST00000377902 UBAC1Q9BSL1 405 aa20.41■□□□□ 0.86
GNE-201ENST00000377902 NAA15Q9BXJ9 866 aaKnown RBP20.41■□□□□ 0.86
GNE-201ENST00000377902 L1RE1Q9UN81 338 aa20.41■□□□□ 0.86
GNE-201ENST00000377902 TNKSO95271 1327 aa20.4■□□□□ 0.86
GNE-201ENST00000377902 CYP2D7A0A087X1C5 515 aa20.4■□□□□ 0.86
GNE-201ENST00000377902 RNF216Q9NWF9 866 aaPredicted RBP20.4■□□□□ 0.86
GNE-201ENST00000377902 TAB2Q9NYJ8 693 aa20.4■□□□□ 0.86
GNE-201ENST00000377902 BAZ2BQ9UIF8 2168 aaKnown RBP20.4■□□□□ 0.86
GNE-201ENST00000377902 N4BP3O15049 544 aa20.4■□□□□ 0.86
GNE-201ENST00000377902 ADAMTS3O15072 1205 aa20.4■□□□□ 0.86
GNE-201ENST00000377902 TRHP20396 242 aaPredicted RBP20.4■□□□□ 0.86
GNE-201ENST00000377902 ARHGAP25P42331 645 aa20.4■□□□□ 0.86
GNE-201ENST00000377902 MUM1L1Q5H9M0 696 aa20.4■□□□□ 0.86
GNE-201ENST00000377902 RAB21Q9UL25 225 aa20.4■□□□□ 0.86
GNE-201ENST00000377902 FAN1Q9Y2M0 1017 aa20.4■□□□□ 0.86
GNE-201ENST00000377902 NID2Q14112 1375 aa20.39■□□□□ 0.85
GNE-201ENST00000377902 CCDC196A0A1B0GTZ2 297 aa20.39■□□□□ 0.85
GNE-201ENST00000377902 PDE8AO60658 829 aa20.39■□□□□ 0.85
GNE-201ENST00000377902 STARD3NLO95772 234 aa20.39■□□□□ 0.85
GNE-201ENST00000377902 PPARAQ07869 468 aa20.39■□□□□ 0.85
GNE-201ENST00000377902 FILIP1LQ4L180 1135 aa20.39■□□□□ 0.85
GNE-201ENST00000377902 HDXQ7Z353 690 aa20.39■□□□□ 0.85
GNE-201ENST00000377902 MSANTD4Q8NCY6 345 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms