RNA–Protein interactions for RNA: ENST00000377135.8

IRF3-202, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,442 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-202ENST00000377135 CYP2D7A0A087X1C5 515 aa21.44■■□□□ 1.02
IRF3-202ENST00000377135 USP17L15C9J2P7 530 aa21.44■■□□□ 1.02
IRF3-202ENST00000377135 USP17L13C9JLJ4 530 aa21.44■■□□□ 1.02
IRF3-202ENST00000377135 USP17L11C9JVI0 530 aa21.44■■□□□ 1.02
IRF3-202ENST00000377135 USP17L18D6R9N7 530 aa21.44■■□□□ 1.02
IRF3-202ENST00000377135 USP17L22D6RA61 530 aa21.44■■□□□ 1.02
IRF3-202ENST00000377135 USP17L17D6RBQ6 530 aa21.44■■□□□ 1.02
IRF3-202ENST00000377135 USP17L19D6RCP7 530 aa21.44■■□□□ 1.02
IRF3-202ENST00000377135 USP17L20D6RJB6 530 aa21.44■■□□□ 1.02
IRF3-202ENST00000377135 UBXN2AP68543 259 aa21.44■■□□□ 1.02
IRF3-202ENST00000377135 USP17L24Q0WX57 530 aa21.44■■□□□ 1.02
IRF3-202ENST00000377135 IRF5Q13568 498 aa21.44■■□□□ 1.02
IRF3-202ENST00000377135 OTUD7AQ8TE49 926 aaPredicted RBP21.44■■□□□ 1.02
IRF3-202ENST00000377135 C12orf42Q96LP6 360 aa21.44■■□□□ 1.02
IRF3-202ENST00000377135 ZFYP08048 801 aaPredicted RBP21.43■■□□□ 1.02
IRF3-202ENST00000377135 PXYLP1Q8TE99 480 aa21.43■■□□□ 1.02
IRF3-202ENST00000377135 OSBP2Q969R2 916 aa21.43■■□□□ 1.02
IRF3-202ENST00000377135 SMIM22K7EJ46 135 aa21.42■■□□□ 1.02
IRF3-202ENST00000377135 PEX10O60683 326 aa21.42■■□□□ 1.02
IRF3-202ENST00000377135 GLRX3O76003 335 aaKnown RBP21.42■■□□□ 1.02
IRF3-202ENST00000377135 CCL5P13501 91 aa21.42■■□□□ 1.02
IRF3-202ENST00000377135 ELNP15502 786 aa21.42■■□□□ 1.02
IRF3-202ENST00000377135 CDK8P49336 464 aa21.42■■□□□ 1.02
IRF3-202ENST00000377135 LRRFIP1Q32MZ4 808 aaKnown RBP21.42■■□□□ 1.02
IRF3-202ENST00000377135 Q3C1V9 767 aa21.42■■□□□ 1.02
IRF3-202ENST00000377135 CTR9Q6PD62 1173 aa21.42■■□□□ 1.02
IRF3-202ENST00000377135 CATSPERGQ6ZRH7 1159 aa21.42■■□□□ 1.02
IRF3-202ENST00000377135 TMEM179Q6ZVK1 233 aa21.42■■□□□ 1.02
IRF3-202ENST00000377135 APPBP2Q92624 585 aa21.42■■□□□ 1.02
IRF3-202ENST00000377135 RNF208Q9H0X6 261 aa21.42■■□□□ 1.02
IRF3-202ENST00000377135 TXNRD2Q9NNW7 524 aa21.42■■□□□ 1.02
IRF3-202ENST00000377135 LOC285556D6RIA3 1793 aa21.41■■□□□ 1.02
IRF3-202ENST00000377135 HDAC1Q13547 482 aaPredicted RBP21.41■■□□□ 1.02
IRF3-202ENST00000377135 CCAR1Q8IX12 1150 aaKnown RBP21.41■■□□□ 1.02
IRF3-202ENST00000377135 GTF3C2Q8WUA4 911 aaPredicted RBP21.41■■□□□ 1.02
IRF3-202ENST00000377135 GCC1Q96CN9 775 aa21.41■■□□□ 1.02
IRF3-202ENST00000377135 CCDC17Q96LX7 622 aa21.41■■□□□ 1.02
IRF3-202ENST00000377135 GJD2Q9UKL4 321 aa21.41■■□□□ 1.02
IRF3-202ENST00000377135 MX1P20591 662 aa21.4■■□□□ 1.02
IRF3-202ENST00000377135 AAMPQ13685 434 aa21.4■■□□□ 1.02
IRF3-202ENST00000377135 PI4K2BQ8TCG2 481 aa21.4■■□□□ 1.02
IRF3-202ENST00000377135 PAGR1Q9BTK6 254 aa21.4■■□□□ 1.02
IRF3-202ENST00000377135 MGAMO43451 1857 aa21.4■■□□□ 1.02
IRF3-202ENST00000377135 A0A1W2PRG0 241 aa21.39■■□□□ 1.02
IRF3-202ENST00000377135 GSG1L2A8MUP6 293 aa21.39■■□□□ 1.02
IRF3-202ENST00000377135 GJB1P08034 283 aa21.39■■□□□ 1.02
IRF3-202ENST00000377135 AKR1B1P15121 316 aa21.39■■□□□ 1.02
IRF3-202ENST00000377135 VCAM1P19320 739 aa21.39■■□□□ 1.02
IRF3-202ENST00000377135 NKX2-3Q8TAU0 364 aa21.39■■□□□ 1.02
IRF3-202ENST00000377135 DOCK3Q8IZD9 2030 aa21.38■■□□□ 1.01
IRF3-202ENST00000377135 APPP05067 770 aa21.38■■□□□ 1.01
IRF3-202ENST00000377135 ERVK-9P63128 1117 aa21.38■■□□□ 1.01
IRF3-202ENST00000377135 ERVK-24P63145 666 aa21.38■■□□□ 1.01
IRF3-202ENST00000377135 GIMAP6Q6P9H5 292 aa21.38■■□□□ 1.01
IRF3-202ENST00000377135 POTEEQ6S8J3 1075 aa21.38■■□□□ 1.01
IRF3-202ENST00000377135 C16orf86Q6ZW13 317 aa21.38■■□□□ 1.01
IRF3-202ENST00000377135 SIAH1Q8IUQ4 282 aa21.38■■□□□ 1.01
IRF3-202ENST00000377135 RPAP3Q9H6T3 665 aaPredicted RBP21.38■■□□□ 1.01
IRF3-202ENST00000377135 RABGAP1Q9Y3P9 1069 aa21.38■■□□□ 1.01
IRF3-202ENST00000377135 MINDY4BA8MYZ0 360 aa21.38■■□□□ 1.01
IRF3-202ENST00000377135 GPAA1O43292 621 aa21.38■■□□□ 1.01
IRF3-202ENST00000377135 INHAP05111 366 aa21.38■■□□□ 1.01
IRF3-202ENST00000377135 GNAT2P19087 354 aa21.38■■□□□ 1.01
IRF3-202ENST00000377135 MAPK4P31152 587 aa21.38■■□□□ 1.01
IRF3-202ENST00000377135 SBK1Q52WX2 424 aa21.38■■□□□ 1.01
IRF3-202ENST00000377135 PRPF38BQ5VTL8 546 aaKnown RBP21.38■■□□□ 1.01
IRF3-202ENST00000377135 UNC93B1Q9H1C4 597 aa21.38■■□□□ 1.01
IRF3-202ENST00000377135 ARHGEF10LQ9HCE6 1279 aa21.38■■□□□ 1.01
IRF3-202ENST00000377135 HOXC10Q9NYD6 342 aa21.38■■□□□ 1.01
IRF3-202ENST00000377135 ARPP21Q9UBL0 812 aaPredicted RBP21.38■■□□□ 1.01
IRF3-202ENST00000377135 NAV1Q8NEY1 1877 aa21.37■■□□□ 1.01
IRF3-202ENST00000377135 PATL2C9JE40 543 aaKnown RBP21.37■■□□□ 1.01
IRF3-202ENST00000377135 GJA8P48165 433 aa21.37■■□□□ 1.01
IRF3-202ENST00000377135 COG2Q14746 738 aa21.37■■□□□ 1.01
IRF3-202ENST00000377135 FSD1Q9BTV5 496 aa21.37■■□□□ 1.01
IRF3-202ENST00000377135 BRCA2P51587 3418 aa21.36■■□□□ 1.01
IRF3-202ENST00000377135 M0R2C6 588 aa21.36■■□□□ 1.01
IRF3-202ENST00000377135 CYP2B6P20813 491 aa21.36■■□□□ 1.01
IRF3-202ENST00000377135 STK11IPQ8N1F8 1099 aa21.36■■□□□ 1.01
IRF3-202ENST00000377135 NUDT12Q9BQG2 462 aa21.36■■□□□ 1.01
IRF3-202ENST00000377135 PORCNQ9H237 461 aa21.36■■□□□ 1.01
IRF3-202ENST00000377135 RWDD1Q9H446 243 aaPredicted RBP21.36■■□□□ 1.01
IRF3-202ENST00000377135 KANSL2Q9H9L4 492 aa21.36■■□□□ 1.01
IRF3-202ENST00000377135 MKNK2Q9HBH9 465 aa21.36■■□□□ 1.01
IRF3-202ENST00000377135 TMX2Q9Y320 296 aa21.36■■□□□ 1.01
IRF3-202ENST00000377135 CCNA1P78396 465 aa21.35■■□□□ 1.01
IRF3-202ENST00000377135 ATP2B2Q01814 1243 aa21.35■■□□□ 1.01
IRF3-202ENST00000377135 ICA1Q05084 483 aa21.35■■□□□ 1.01
IRF3-202ENST00000377135 SEC62Q99442 399 aaKnown RBP21.35■■□□□ 1.01
IRF3-202ENST00000377135 SH2D4AQ9H788 454 aa21.35■■□□□ 1.01
IRF3-202ENST00000377135 CWC22Q9HCG8 908 aaKnown RBP21.35■■□□□ 1.01
IRF3-202ENST00000377135 BAZ2AQ9UIF9 1905 aaKnown RBP21.35■■□□□ 1.01
IRF3-202ENST00000377135 DDX60LQ5H9U9 1706 aaKnown RBP21.34■■□□□ 1.01
IRF3-202ENST00000377135 MYH7P12883 1935 aa21.34■■□□□ 1.01
IRF3-202ENST00000377135 SGPL1O95470 568 aa21.34■■□□□ 1.01
IRF3-202ENST00000377135 TDO2P48775 406 aa21.34■■□□□ 1.01
IRF3-202ENST00000377135 KIAA1755Q5JYT7 1200 aa21.34■■□□□ 1.01
IRF3-202ENST00000377135 PLEKHH3Q7Z736 793 aa21.34■■□□□ 1.01
IRF3-202ENST00000377135 CLEC10AQ8IUN9 316 aa21.34■■□□□ 1.01
IRF3-202ENST00000377135 U2AF1L4Q8WU68 220 aaKnown RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms