RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 USP17L24Q0WX57 530 aa22.41■■□□□ 1.18
HDAC6-202ENST00000376610 SLC9C2Q5TAH2 1124 aa22.41■■□□□ 1.18
HDAC6-202ENST00000376610 C12orf42Q96LP6 360 aa22.41■■□□□ 1.18
HDAC6-202ENST00000376610 RBM27Q9P2N5 1060 aaKnown RBP22.41■■□□□ 1.18
HDAC6-202ENST00000376610 NAV1Q8NEY1 1877 aa22.41■■□□□ 1.18
HDAC6-202ENST00000376610 PLXNB2O15031 1838 aa22.41■■□□□ 1.18
HDAC6-202ENST00000376610 ZKSCAN1P17029 563 aaPredicted RBP22.4■■□□□ 1.18
HDAC6-202ENST00000376610 RGS2P41220 211 aa22.4■■□□□ 1.18
HDAC6-202ENST00000376610 CCNA1P78396 465 aa22.4■■□□□ 1.18
HDAC6-202ENST00000376610 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.4■■□□□ 1.18
HDAC6-202ENST00000376610 TRIB2Q92519 343 aa22.4■■□□□ 1.18
HDAC6-202ENST00000376610 DNAJC2Q99543 621 aaKnown RBP22.4■■□□□ 1.18
HDAC6-202ENST00000376610 RIOK1Q9BRS2 568 aaKnown RBP22.4■■□□□ 1.18
HDAC6-202ENST00000376610 BCL11AQ9H165 835 aa22.4■■□□□ 1.18
HDAC6-202ENST00000376610 PEX10O60683 326 aa22.39■■□□□ 1.17
HDAC6-202ENST00000376610 GLRX3O76003 335 aaKnown RBP22.39■■□□□ 1.17
HDAC6-202ENST00000376610 PRKAR2AP13861 404 aaKnown RBP22.39■■□□□ 1.17
HDAC6-202ENST00000376610 PDE6AP16499 860 aa22.39■■□□□ 1.17
HDAC6-202ENST00000376610 TRIM32Q13049 653 aa22.39■■□□□ 1.17
HDAC6-202ENST00000376610 GPR142Q7Z601 462 aa22.39■■□□□ 1.17
HDAC6-202ENST00000376610 PLEKHH3Q7Z736 793 aa22.39■■□□□ 1.17
HDAC6-202ENST00000376610 KIAA1683Q9H0B3 1180 aa22.39■■□□□ 1.17
HDAC6-202ENST00000376610 MCM9Q9NXL9 1143 aa22.39■■□□□ 1.17
HDAC6-202ENST00000376610 RABGAP1Q9Y3P9 1069 aa22.39■■□□□ 1.17
HDAC6-202ENST00000376610 GOLIM4O00461 696 aa22.38■■□□□ 1.17
HDAC6-202ENST00000376610 RAB11FIP3O75154 756 aa22.38■■□□□ 1.17
HDAC6-202ENST00000376610 NBPF3Q9H094 633 aa22.38■■□□□ 1.17
HDAC6-202ENST00000376610 ZNF532Q9HCE3 1301 aa22.37■■□□□ 1.17
HDAC6-202ENST00000376610 SHMT1P34896 483 aa22.37■■□□□ 1.17
HDAC6-202ENST00000376610 PLCD1P51178 756 aa22.37■■□□□ 1.17
HDAC6-202ENST00000376610 Q3C1V9 767 aa22.37■■□□□ 1.17
HDAC6-202ENST00000376610 DIS3LQ8TF46 1054 aaKnown RBP22.37■■□□□ 1.17
HDAC6-202ENST00000376610 PORCNQ9H237 461 aa22.37■■□□□ 1.17
HDAC6-202ENST00000376610 COG6Q9Y2V7 657 aa22.37■■□□□ 1.17
HDAC6-202ENST00000376610 RANBP2P49792 3224 aaKnown RBP22.37■■□□□ 1.17
HDAC6-202ENST00000376610 MPHOSPH10O00566 681 aaKnown RBP22.36■■□□□ 1.17
HDAC6-202ENST00000376610 VCAM1P19320 739 aa22.36■■□□□ 1.17
HDAC6-202ENST00000376610 WDR78Q5VTH9 848 aa22.36■■□□□ 1.17
HDAC6-202ENST00000376610 CATSPERGQ6ZRH7 1159 aa22.36■■□□□ 1.17
HDAC6-202ENST00000376610 APBA2Q99767 749 aa22.36■■□□□ 1.17
HDAC6-202ENST00000376610 DDX60LQ5H9U9 1706 aaKnown RBP22.36■■□□□ 1.17
HDAC6-202ENST00000376610 MAP3K21Q5TCX8 1036 aa22.35■■□□□ 1.17
HDAC6-202ENST00000376610 ACER1Q8TDN7 264 aa22.35■■□□□ 1.17
HDAC6-202ENST00000376610 C11orf49Q9H6J7 331 aa22.35■■□□□ 1.17
HDAC6-202ENST00000376610 ZBTB40Q9NUA8 1239 aa22.35■■□□□ 1.17
HDAC6-202ENST00000376610 A0A1W2PPC1 479 aa22.34■■□□□ 1.17
HDAC6-202ENST00000376610 MORN1Q5T089 497 aa22.34■■□□□ 1.17
HDAC6-202ENST00000376610 USP6NLQ92738 828 aa22.34■■□□□ 1.17
HDAC6-202ENST00000376610 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.34■■□□□ 1.172e-8■■■■□ 24.1
HDAC6-202ENST00000376610 OGDHLQ9ULD0 1010 aa22.34■■□□□ 1.17
HDAC6-202ENST00000376610 IVNS1ABPQ9Y6Y0 642 aa22.34■■□□□ 1.17
HDAC6-202ENST00000376610 ALPK3Q96L96 1907 aa22.33■■□□□ 1.17
HDAC6-202ENST00000376610 MAP2K5Q13163 448 aa22.33■■□□□ 1.17
HDAC6-202ENST00000376610 SEPT2Q15019 361 aa22.33■■□□□ 1.17
HDAC6-202ENST00000376610 AMOTL1Q8IY63 956 aa22.33■■□□□ 1.17
HDAC6-202ENST00000376610 C7orf61Q8IZ16 206 aa22.33■■□□□ 1.17
HDAC6-202ENST00000376610 SDR42E1Q8WUS8 393 aa22.33■■□□□ 1.17
HDAC6-202ENST00000376610 PRO3102Q9H379 93 aa22.33■■□□□ 1.17
HDAC6-202ENST00000376610 RPAP3Q9H6T3 665 aaPredicted RBP22.33■■□□□ 1.17
HDAC6-202ENST00000376610 PAG1Q9NWQ8 432 aa22.33■■□□□ 1.17
HDAC6-202ENST00000376610 SWAP70Q9UH65 585 aa22.33■■□□□ 1.17
HDAC6-202ENST00000376610 MYH8P13535 1937 aa22.33■■□□□ 1.16
HDAC6-202ENST00000376610 GABPAQ06546 454 aa22.32■■□□□ 1.16
HDAC6-202ENST00000376610 CACNB2Q08289 660 aaPredicted RBP22.32■■□□□ 1.16
HDAC6-202ENST00000376610 LBX2Q6XYB7 198 aa22.32■■□□□ 1.16
HDAC6-202ENST00000376610 LCORLQ8N3X6 602 aa22.32■■□□□ 1.16
HDAC6-202ENST00000376610 EDC3Q96F86 508 aaKnown RBP22.32■■□□□ 1.16
HDAC6-202ENST00000376610 DDRGK1Q96HY6 314 aa22.32■■□□□ 1.16
HDAC6-202ENST00000376610 DCP1AQ9NPI6 582 aaPredicted RBP22.32■■□□□ 1.16
HDAC6-202ENST00000376610 TCRBV5S4A2TA0A5A2 114 aa22.31■■□□□ 1.16
HDAC6-202ENST00000376610 SLC15A5A6NIM6 579 aa22.31■■□□□ 1.16
HDAC6-202ENST00000376610 CNMDO75829 334 aa22.31■■□□□ 1.16
HDAC6-202ENST00000376610 CCL14Q16627 93 aa22.31■■□□□ 1.16
HDAC6-202ENST00000376610 MFSD14CQ5VZR4 134 aa22.31■■□□□ 1.16
HDAC6-202ENST00000376610 SIRT2Q8IXJ6 389 aa22.31■■□□□ 1.16
HDAC6-202ENST00000376610 BOLA2Q9H3K6 86 aa22.31■■□□□ 1.16
HDAC6-202ENST00000376610 ARMT1Q9H993 441 aa22.31■■□□□ 1.16
HDAC6-202ENST00000376610 SPDYE16A6NNV3 312 aaPredicted RBP22.3■■□□□ 1.16
HDAC6-202ENST00000376610 GUCY1A2P33402 732 aa22.3■■□□□ 1.16
HDAC6-202ENST00000376610 POTEEQ6S8J3 1075 aa22.3■■□□□ 1.16
HDAC6-202ENST00000376610 TMEM179Q6ZVK1 233 aa22.3■■□□□ 1.16
HDAC6-202ENST00000376610 TANGO6Q9C0B7 1094 aa22.3■■□□□ 1.16
HDAC6-202ENST00000376610 ATP8A2Q9NTI2 1148 aa22.3■■□□□ 1.16
HDAC6-202ENST00000376610 HOXC10Q9NYD6 342 aa22.3■■□□□ 1.16
HDAC6-202ENST00000376610 STAP2Q9UGK3 403 aa22.3■■□□□ 1.16
HDAC6-202ENST00000376610 RCAN3Q9UKA8 241 aa22.3■■□□□ 1.16
HDAC6-202ENST00000376610 SZT2Q5T011 3432 aa22.3■■□□□ 1.16
HDAC6-202ENST00000376610 MBD4O95243 580 aa22.29■■□□□ 1.16
HDAC6-202ENST00000376610 ATP5JP18859 108 aa22.29■■□□□ 1.16
HDAC6-202ENST00000376610 PTPREP23469 700 aa22.29■■□□□ 1.16
HDAC6-202ENST00000376610 ADD2P35612 726 aa22.29■■□□□ 1.16
HDAC6-202ENST00000376610 SH2D4AQ9H788 454 aa22.29■■□□□ 1.16
HDAC6-202ENST00000376610 ARHGEF10LQ9HCE6 1279 aa22.29■■□□□ 1.16
HDAC6-202ENST00000376610 CCND3P30281 292 aaPredicted RBP22.28■■□□□ 1.16
HDAC6-202ENST00000376610 ATP2B2Q01814 1243 aa22.28■■□□□ 1.16
HDAC6-202ENST00000376610 COG2Q14746 738 aa22.28■■□□□ 1.16
HDAC6-202ENST00000376610 ZSCAN25Q6NSZ9 544 aa22.28■■□□□ 1.16
HDAC6-202ENST00000376610 BTBD7Q9P203 1132 aa22.28■■□□□ 1.16
HDAC6-202ENST00000376610 ZMYND8Q9ULU4 1186 aaPredicted RBP22.28■■□□□ 1.16
HDAC6-202ENST00000376610 MYH7P12883 1935 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms