RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 CERS3Q8IU89 383 aa14.6□□□□□ -0.07
CLCN6-206ENST00000376496 RNF214Q8ND24 703 aa14.6□□□□□ -0.07
CLCN6-206ENST00000376496 PRMT6Q96LA8 375 aaPredicted RBP14.6□□□□□ -0.07
CLCN6-206ENST00000376496 ZDHHC15Q96MV8 337 aa14.6□□□□□ -0.07
CLCN6-206ENST00000376496 ELP1O95163 1332 aa14.6□□□□□ -0.07
CLCN6-206ENST00000376496 STK36Q9NRP7 1315 aa14.6□□□□□ -0.07
CLCN6-206ENST00000376496 MYH6P13533 1939 aa14.59□□□□□ -0.07
CLCN6-206ENST00000376496 DDAH1O94760 285 aa14.59□□□□□ -0.07
CLCN6-206ENST00000376496 DEXIO95424 95 aa14.59□□□□□ -0.07
CLCN6-206ENST00000376496 POLD1P28340 1107 aa14.59□□□□□ -0.07
CLCN6-206ENST00000376496 SUPT20HQ8NEM7 779 aa14.59□□□□□ -0.07
CLCN6-206ENST00000376496 ZNF396Q96N95 335 aaPredicted RBP14.59□□□□□ -0.07
CLCN6-206ENST00000376496 MTFR1LQ9H019 292 aa14.59□□□□□ -0.07
CLCN6-206ENST00000376496 PIM2Q9P1W9 311 aa14.59□□□□□ -0.07
CLCN6-206ENST00000376496 FOCADQ5VW36 1801 aa14.59□□□□□ -0.07
CLCN6-206ENST00000376496 FAM205CA6NFA0 338 aa14.59□□□□□ -0.07
CLCN6-206ENST00000376496 DDTLA6NHG4 134 aaPredicted RBP14.59□□□□□ -0.07
CLCN6-206ENST00000376496 ATP2B1P20020 1258 aa14.59□□□□□ -0.07
CLCN6-206ENST00000376496 ME1P48163 572 aa14.59□□□□□ -0.07
CLCN6-206ENST00000376496 AKAP17AQ02040 695 aaKnown RBP14.59□□□□□ -0.07
CLCN6-206ENST00000376496 CFAP100Q494V2 611 aa14.59□□□□□ -0.07
CLCN6-206ENST00000376496 ZSCAN29Q8IWY8 852 aaPredicted RBP14.59□□□□□ -0.07
CLCN6-206ENST00000376496 DIS3L2Q8IYB7 885 aaKnown RBP14.59□□□□□ -0.07
CLCN6-206ENST00000376496 RTKN2Q8IZC4 609 aa14.59□□□□□ -0.07
CLCN6-206ENST00000376496 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.59□□□□□ -0.07
CLCN6-206ENST00000376496 DACT1Q9NYF0 836 aa14.59□□□□□ -0.07
CLCN6-206ENST00000376496 FAM198AQ9UFP1 575 aa14.59□□□□□ -0.07
CLCN6-206ENST00000376496 RCOR1Q9UKL0 485 aa14.59□□□□□ -0.07
CLCN6-206ENST00000376496 ADAMTS3O15072 1205 aa14.59□□□□□ -0.07
CLCN6-206ENST00000376496 NR1I2O75469 434 aa14.59□□□□□ -0.07
CLCN6-206ENST00000376496 SLC35G1Q2M3R5 365 aa14.59□□□□□ -0.07
CLCN6-206ENST00000376496 SCAF8Q9UPN6 1271 aaKnown RBP14.59□□□□□ -0.07
CLCN6-206ENST00000376496 CNTNAP5Q8WYK1 1306 aa14.58□□□□□ -0.07
CLCN6-206ENST00000376496 CLRN2A0PK11 232 aa14.58□□□□□ -0.08
CLCN6-206ENST00000376496 NOM1Q5C9Z4 860 aaKnown RBP14.58□□□□□ -0.08
CLCN6-206ENST00000376496 CCDC183Q5T5S1 534 aa14.58□□□□□ -0.08
CLCN6-206ENST00000376496 SH3BP5LQ7L8J4 393 aa14.58□□□□□ -0.08
CLCN6-206ENST00000376496 DGKHQ86XP1 1220 aa14.58□□□□□ -0.08
CLCN6-206ENST00000376496 GOLPH3LQ9H4A5 285 aa14.58□□□□□ -0.08
CLCN6-206ENST00000376496 MMP1P03956 469 aa14.58□□□□□ -0.08
CLCN6-206ENST00000376496 MARCKSP29966 332 aaPredicted RBP14.58□□□□□ -0.08
CLCN6-206ENST00000376496 RCAN1P53805 252 aa14.58□□□□□ -0.08
CLCN6-206ENST00000376496 GABPAQ06546 454 aa14.58□□□□□ -0.08
CLCN6-206ENST00000376496 STK38Q15208 465 aa14.58□□□□□ -0.08
CLCN6-206ENST00000376496 L1TD1Q5T7N2 865 aaKnown RBP14.58□□□□□ -0.08
CLCN6-206ENST00000376496 LRSAM1Q6UWE0 723 aa14.58□□□□□ -0.08
CLCN6-206ENST00000376496 CCDC125Q86Z20 511 aa14.58□□□□□ -0.08
CLCN6-206ENST00000376496 LRRC47Q8N1G4 583 aaKnown RBP14.58□□□□□ -0.08
CLCN6-206ENST00000376496 SYAP1Q96A49 352 aaPredicted RBP14.58□□□□□ -0.08
CLCN6-206ENST00000376496 SERPINB13Q9UIV8 391 aa14.58□□□□□ -0.08
CLCN6-206ENST00000376496 SHTN1A0MZ66 631 aa14.57□□□□□ -0.08
CLCN6-206ENST00000376496 CALM1P0DP23 149 aa14.57□□□□□ -0.08
CLCN6-206ENST00000376496 CALM2P0DP24 149 aa14.57□□□□□ -0.08
CLCN6-206ENST00000376496 CALM3P0DP25 149 aa14.57□□□□□ -0.08
CLCN6-206ENST00000376496 NEDD1Q8NHV4 660 aa14.57□□□□□ -0.08
CLCN6-206ENST00000376496 RNF26Q9BY78 433 aaPredicted RBP14.57□□□□□ -0.08
CLCN6-206ENST00000376496 DNAJC18Q9H819 358 aa14.57□□□□□ -0.08
CLCN6-206ENST00000376496 RBM28Q9NW13 759 aaKnown RBP14.57□□□□□ -0.08
CLCN6-206ENST00000376496 PCDHA7Q9UN72 937 aa14.57□□□□□ -0.08
CLCN6-206ENST00000376496 BCS1LQ9Y276 419 aa14.57□□□□□ -0.08
CLCN6-206ENST00000376496 MPHOSPH10O00566 681 aaKnown RBP14.57□□□□□ -0.08
CLCN6-206ENST00000376496 SHMT1P34896 483 aa14.57□□□□□ -0.08
CLCN6-206ENST00000376496 MRE11P49959 708 aa14.57□□□□□ -0.08
CLCN6-206ENST00000376496 SF3A1Q15459 793 aaKnown RBP14.57□□□□□ -0.08
CLCN6-206ENST00000376496 DALRD3Q5D0E6 543 aaKnown RBP14.57□□□□□ -0.08
CLCN6-206ENST00000376496 USP17L2Q6R6M4 530 aa14.57□□□□□ -0.08
CLCN6-206ENST00000376496 BRAPQ7Z569 592 aa14.57□□□□□ -0.08
CLCN6-206ENST00000376496 WASF1Q92558 559 aa14.57□□□□□ -0.08
CLCN6-206ENST00000376496 GPKOWQ92917 476 aaPredicted RBP eCLIP14.57□□□□□ -0.08
CLCN6-206ENST00000376496 PSMD1Q99460 953 aa14.57□□□□□ -0.08
CLCN6-206ENST00000376496 PRPF3O43395 683 aaKnown RBP14.56□□□□□ -0.08
CLCN6-206ENST00000376496 ATP2B2Q01814 1243 aa14.56□□□□□ -0.08
CLCN6-206ENST00000376496 EARS2Q5JPH6 523 aaKnown RBP14.56□□□□□ -0.08
CLCN6-206ENST00000376496 CCAR1Q8IX12 1150 aaKnown RBP14.56□□□□□ -0.08
CLCN6-206ENST00000376496 CKAP2LQ8IYA6 745 aa14.56□□□□□ -0.08
CLCN6-206ENST00000376496 LINC00301Q8NCQ3 95 aa14.56□□□□□ -0.08
CLCN6-206ENST00000376496 ZNF287Q9HBT7 754 aa14.56□□□□□ -0.08
CLCN6-206ENST00000376496 RTEL1Q9NZ71 1219 aa14.56□□□□□ -0.08
CLCN6-206ENST00000376496 MAD2L2Q9UI95 211 aa14.56□□□□□ -0.08
CLCN6-206ENST00000376496 ANO1Q5XXA6 986 aa14.56□□□□□ -0.08
CLCN6-206ENST00000376496 TCP10L2B9ZVM9 353 aa14.55□□□□□ -0.08
CLCN6-206ENST00000376496 U2AF2P26368 475 aaKnown RBP eCLIP14.55□□□□□ -0.084e-7■■■□□ 14.7
CLCN6-206ENST00000376496 RSBN1LQ6PCB5 846 aaPredicted RBP14.55□□□□□ -0.08
CLCN6-206ENST00000376496 UPF1Q92900 1129 aaKnown RBP eCLIP14.55□□□□□ -0.08
CLCN6-206ENST00000376496 TCP11L1Q9NUJ3 509 aa14.55□□□□□ -0.08
CLCN6-206ENST00000376496 SERPINA10Q9UK55 444 aa14.55□□□□□ -0.08
CLCN6-206ENST00000376496 FRMPD2Q68DX3 1309 aaPredicted RBP14.55□□□□□ -0.08
CLCN6-206ENST00000376496 CYTH3O43739 400 aa14.55□□□□□ -0.08
CLCN6-206ENST00000376496 NOSTRINQ8IVI9 506 aa14.55□□□□□ -0.08
CLCN6-206ENST00000376496 NLGN2Q8NFZ4 835 aa14.55□□□□□ -0.08
CLCN6-206ENST00000376496 ANKS1AQ92625 1134 aa14.55□□□□□ -0.08
CLCN6-206ENST00000376496 VAT1LQ9HCJ6 419 aa14.55□□□□□ -0.08
CLCN6-206ENST00000376496 A0A1B0GVL5 298 aa14.55□□□□□ -0.08
CLCN6-206ENST00000376496 USP17L5A8MUK1 530 aa14.55□□□□□ -0.08
CLCN6-206ENST00000376496 TOB1P50616 345 aaPredicted RBP14.55□□□□□ -0.08
CLCN6-206ENST00000376496 TGFB2P61812 414 aa14.55□□□□□ -0.08
CLCN6-206ENST00000376496 FKBP1AP62942 108 aaKnown RBP14.55□□□□□ -0.08
CLCN6-206ENST00000376496 GRM4Q14833 912 aa14.55□□□□□ -0.08
CLCN6-206ENST00000376496 NIM1KQ8IY84 436 aa14.55□□□□□ -0.08
CLCN6-206ENST00000376496 MRVI1Q9Y6F6 885 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms