RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 RCSD1Q6JBY9 416 aa26.88■■□□□ 1.89
HLA-C-202ENST00000376237 NFXL1Q6ZNB6 911 aa26.88■■□□□ 1.89
HLA-C-202ENST00000376237 ZNF274Q96GC6 653 aaPredicted RBP26.88■■□□□ 1.89
HLA-C-202ENST00000376237 GPHNQ9NQX3 736 aaPredicted RBP26.88■■□□□ 1.89
HLA-C-202ENST00000376237 MYH8P13535 1937 aa26.88■■□□□ 1.89
HLA-C-202ENST00000376237 SYNE3Q6ZMZ3 975 aa26.87■■□□□ 1.89
HLA-C-202ENST00000376237 NYAP2Q9P242 653 aa26.87■■□□□ 1.89
HLA-C-202ENST00000376237 K7ELQ4 463 aaPredicted RBP26.86■■□□□ 1.89
HLA-C-202ENST00000376237 KIF3CO14782 793 aa26.86■■□□□ 1.89
HLA-C-202ENST00000376237 YY1P25490 414 aa26.86■■□□□ 1.89
HLA-C-202ENST00000376237 APOBRQ0VD83 1088 aa26.86■■□□□ 1.89
HLA-C-202ENST00000376237 SEPT2Q15019 361 aa26.86■■□□□ 1.89
HLA-C-202ENST00000376237 RAB3GAP1Q15042 981 aa26.86■■□□□ 1.89
HLA-C-202ENST00000376237 MAP3K11Q16584 847 aa26.86■■□□□ 1.89
HLA-C-202ENST00000376237 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.86■■□□□ 1.892e-7■□□□□ 10.1
HLA-C-202ENST00000376237 TBC1D2Q9BYX2 928 aa26.86■■□□□ 1.89
HLA-C-202ENST00000376237 SH2B1Q9NRF2 756 aaPredicted RBP26.86■■□□□ 1.89
HLA-C-202ENST00000376237 TPCN1Q9ULQ1 816 aa26.86■■□□□ 1.89
HLA-C-202ENST00000376237 SLC12A7Q9Y666 1083 aa26.86■■□□□ 1.89
HLA-C-202ENST00000376237 TOP1P11387 765 aaKnown RBP26.85■■□□□ 1.89
HLA-C-202ENST00000376237 INPP5BP32019 993 aa26.85■■□□□ 1.89
HLA-C-202ENST00000376237 GUCY1A2P33402 732 aa26.85■■□□□ 1.89
HLA-C-202ENST00000376237 RCAN1P53805 252 aa26.85■■□□□ 1.89
HLA-C-202ENST00000376237 JAG1P78504 1218 aa26.85■■□□□ 1.89
HLA-C-202ENST00000376237 MAP3K9P80192 1104 aa26.85■■□□□ 1.89
HLA-C-202ENST00000376237 NOL9Q5SY16 702 aaKnown RBP26.85■■□□□ 1.89
HLA-C-202ENST00000376237 NOL8Q76FK4 1167 aaKnown RBP26.85■■□□□ 1.89
HLA-C-202ENST00000376237 ARMC9Q7Z3E5 817 aa26.85■■□□□ 1.89
HLA-C-202ENST00000376237 SCYL3Q8IZE3 742 aa26.85■■□□□ 1.89
HLA-C-202ENST00000376237 KAT14Q9H8E8 782 aa26.85■■□□□ 1.89
HLA-C-202ENST00000376237 KLF18A0A0U1RQI7 1052 aa26.85■■□□□ 1.89
HLA-C-202ENST00000376237 TRAF5O00463 557 aa26.85■■□□□ 1.89
HLA-C-202ENST00000376237 FKBP1BP68106 108 aa26.85■■□□□ 1.89
HLA-C-202ENST00000376237 ICA1Q05084 483 aa26.85■■□□□ 1.89
HLA-C-202ENST00000376237 PRKG1Q13976 671 aa26.85■■□□□ 1.89
HLA-C-202ENST00000376237 CATIPQ7Z7H3 387 aa26.85■■□□□ 1.89
HLA-C-202ENST00000376237 MKL1Q969V6 931 aa26.85■■□□□ 1.89
HLA-C-202ENST00000376237 SYNPO2Q9UMS6 1093 aa26.85■■□□□ 1.89
HLA-C-202ENST00000376237 UNCXA6NJT0 531 aa26.84■■□□□ 1.89
HLA-C-202ENST00000376237 ITGBL1O95965 494 aaPredicted RBP26.84■■□□□ 1.89
HLA-C-202ENST00000376237 APOA5Q6Q788 366 aa26.84■■□□□ 1.89
HLA-C-202ENST00000376237 TMEM47Q9BQJ4 181 aa26.84■■□□□ 1.89
HLA-C-202ENST00000376237 LARP6Q9BRS8 491 aaKnown RBP26.84■■□□□ 1.89
HLA-C-202ENST00000376237 SENP2Q9HC62 589 aa26.84■■□□□ 1.89
HLA-C-202ENST00000376237 PICK1Q9NRD5 415 aa26.84■■□□□ 1.89
HLA-C-202ENST00000376237 CLIP2Q9UDT6 1046 aa26.84■■□□□ 1.89
HLA-C-202ENST00000376237 BRPF3Q9ULD4 1205 aa26.84■■□□□ 1.89
HLA-C-202ENST00000376237 GREB1LQ9C091 1923 aaPredicted RBP26.84■■□□□ 1.89
HLA-C-202ENST00000376237 TTLL12Q14166 644 aaPredicted RBP26.83■■□□□ 1.89
HLA-C-202ENST00000376237 SHROOM1Q2M3G4 852 aaPredicted RBP26.83■■□□□ 1.89
HLA-C-202ENST00000376237 CHMP4CQ96CF2 233 aa26.83■■□□□ 1.89
HLA-C-202ENST00000376237 TMX3Q96JJ7 454 aa26.83■■□□□ 1.89
HLA-C-202ENST00000376237 CALM1P0DP23 149 aa26.82■■□□□ 1.88
HLA-C-202ENST00000376237 CALM2P0DP24 149 aa26.82■■□□□ 1.88
HLA-C-202ENST00000376237 CALM3P0DP25 149 aa26.82■■□□□ 1.88
HLA-C-202ENST00000376237 EEF2P13639 858 aaKnown RBP26.82■■□□□ 1.88
HLA-C-202ENST00000376237 PDIA3P30101 505 aaKnown RBP26.82■■□□□ 1.88
HLA-C-202ENST00000376237 ANKRD13AQ8IZ07 590 aa26.82■■□□□ 1.88
HLA-C-202ENST00000376237 ZNF654Q8IZM8 581 aa26.82■■□□□ 1.88
HLA-C-202ENST00000376237 PNMA1Q8ND90 353 aa26.82■■□□□ 1.88
HLA-C-202ENST00000376237 ZKSCAN4Q969J2 545 aaPredicted RBP26.82■■□□□ 1.88
HLA-C-202ENST00000376237 ARHGEF10LQ9HCE6 1279 aa26.82■■□□□ 1.88
HLA-C-202ENST00000376237 FZD1Q9UP38 647 aa26.82■■□□□ 1.88
HLA-C-202ENST00000376237 CSADQ9Y600 493 aa26.82■■□□□ 1.88
HLA-C-202ENST00000376237 USP17L5A8MUK1 530 aa26.81■■□□□ 1.88
HLA-C-202ENST00000376237 ZBTB43O43298 467 aa26.81■■□□□ 1.88
HLA-C-202ENST00000376237 DDAH1O94760 285 aa26.81■■□□□ 1.88
HLA-C-202ENST00000376237 PPP2R5BQ15173 497 aa26.81■■□□□ 1.88
HLA-C-202ENST00000376237 ME3Q16798 604 aa26.81■■□□□ 1.88
HLA-C-202ENST00000376237 SMC1BQ8NDV3 1235 aa26.81■■□□□ 1.88
HLA-C-202ENST00000376237 SLKQ9H2G2 1235 aaPredicted RBP26.81■■□□□ 1.88
HLA-C-202ENST00000376237 SH2D4AQ9H788 454 aa26.81■■□□□ 1.88
HLA-C-202ENST00000376237 NAP1L2Q9ULW6 460 aaPredicted RBP26.81■■□□□ 1.88
HLA-C-202ENST00000376237 ATP2B2Q01814 1243 aa26.8■■□□□ 1.88
HLA-C-202ENST00000376237 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.8■■□□□ 1.88
HLA-C-202ENST00000376237 SIAH1Q8IUQ4 282 aa26.8■■□□□ 1.88
HLA-C-202ENST00000376237 MAP3K14Q99558 947 aa26.8■■□□□ 1.88
HLA-C-202ENST00000376237 ZNF408Q9H9D4 720 aa26.8■■□□□ 1.88
HLA-C-202ENST00000376237 GOLGA8BA8MQT2 603 aa26.8■■□□□ 1.88
HLA-C-202ENST00000376237 PFKFB2O60825 505 aa26.8■■□□□ 1.88
HLA-C-202ENST00000376237 TOMM70O94826 608 aa26.8■■□□□ 1.88
HLA-C-202ENST00000376237 CLEC10AQ8IUN9 316 aa26.8■■□□□ 1.88
HLA-C-202ENST00000376237 C2orf69Q8N8R5 385 aa26.8■■□□□ 1.88
HLA-C-202ENST00000376237 AS3MTQ9HBK9 375 aa26.8■■□□□ 1.88
HLA-C-202ENST00000376237 TROAPQ12815 778 aa26.79■■□□□ 1.88
HLA-C-202ENST00000376237 RBM46Q8TBY0 533 aaKnown RBP26.79■■□□□ 1.88
HLA-C-202ENST00000376237 GBA2Q9HCG7 927 aaPredicted RBP26.79■■□□□ 1.88
HLA-C-202ENST00000376237 TMX2Q9Y320 296 aa26.79■■□□□ 1.88
HLA-C-202ENST00000376237 DHX16O60231 1041 aaKnown RBP26.78■■□□□ 1.88
HLA-C-202ENST00000376237 CELF2O95319 508 aaKnown RBP26.78■■□□□ 1.88
HLA-C-202ENST00000376237 PTPRAP18433 802 aa26.78■■□□□ 1.88
HLA-C-202ENST00000376237 VGLL4Q14135 290 aa26.78■■□□□ 1.88
HLA-C-202ENST00000376237 LDLRAD1Q5T700 205 aa26.78■■□□□ 1.88
HLA-C-202ENST00000376237 MICU3Q86XE3 530 aa26.78■■□□□ 1.88
HLA-C-202ENST00000376237 WDR18Q9BV38 432 aa26.78■■□□□ 1.88
HLA-C-202ENST00000376237 DAXXQ9UER7 740 aaPredicted RBP26.78■■□□□ 1.88
HLA-C-202ENST00000376237 CCDC196A0A1B0GTZ2 297 aa26.77■■□□□ 1.88
HLA-C-202ENST00000376237 METAP2P50579 478 aaKnown RBP eCLIP26.77■■□□□ 1.88
HLA-C-202ENST00000376237 FMR1Q06787 632 aaKnown RBP eCLIP26.77■■□□□ 1.88
HLA-C-202ENST00000376237 ZNF784Q8NCA9 323 aaPredicted RBP26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms