RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 ALKQ9UM73 1620 aa18.8■□□□□ 0.6
VARS-215ENST00000375663 HLA-DOAP06340 250 aa18.8■□□□□ 0.6
VARS-215ENST00000375663 GRAMD1CQ8IYS0 662 aa18.8■□□□□ 0.6
VARS-215ENST00000375663 FMR1NBQ8N0W7 255 aaPredicted RBP18.8■□□□□ 0.6
VARS-215ENST00000375663 SLC35F6Q8N357 371 aa18.8■□□□□ 0.6
VARS-215ENST00000375663 CSRNP2Q9H175 543 aa18.8■□□□□ 0.6
VARS-215ENST00000375663 PRM3Q9NNZ6 103 aa18.8■□□□□ 0.6
VARS-215ENST00000375663 CRB1P82279 1406 aa18.8■□□□□ 0.6
VARS-215ENST00000375663 LDHBP07195 334 aaKnown RBP18.8■□□□□ 0.6
VARS-215ENST00000375663 CPLX4Q7Z7G2 160 aa18.8■□□□□ 0.6
VARS-215ENST00000375663 TBC1D5Q92609 795 aa18.8■□□□□ 0.6
VARS-215ENST00000375663 EPN1Q9Y6I3 576 aaPredicted RBP18.8■□□□□ 0.6
VARS-215ENST00000375663 TXKP42681 527 aa18.8■□□□□ 0.6
VARS-215ENST00000375663 TMOD2Q9NZR1 351 aa18.8■□□□□ 0.6
VARS-215ENST00000375663 TLDC2A0PJX2 215 aa18.79■□□□□ 0.6
VARS-215ENST00000375663 KMT5BQ4FZB7 885 aa18.79■□□□□ 0.6
VARS-215ENST00000375663 PARP10Q53GL7 1025 aa18.79■□□□□ 0.6
VARS-215ENST00000375663 PPM1EQ8WY54 764 aa18.79■□□□□ 0.6
VARS-215ENST00000375663 SYMPKQ92797 1274 aaKnown RBP18.79■□□□□ 0.6
VARS-215ENST00000375663 CCDC114Q96M63 670 aa18.79■□□□□ 0.6
VARS-215ENST00000375663 NOX5Q96PH1 765 aa18.79■□□□□ 0.6
VARS-215ENST00000375663 CCDC151A5D8V7 595 aa18.79■□□□□ 0.6
VARS-215ENST00000375663 HPDP32754 393 aaPredicted RBP18.79■□□□□ 0.6
VARS-215ENST00000375663 GIGYF2Q6Y7W6 1299 aaKnown RBP18.79■□□□□ 0.6
VARS-215ENST00000375663 ENOX1Q8TC92 643 aaKnown RBP18.79■□□□□ 0.6
VARS-215ENST00000375663 SDR42E1Q8WUS8 393 aa18.79■□□□□ 0.6
VARS-215ENST00000375663 SAMSN1Q9NSI8 373 aaKnown RBP18.79■□□□□ 0.6
VARS-215ENST00000375663 AATFQ9NY61 560 aaKnown RBP eCLIP18.79■□□□□ 0.6
VARS-215ENST00000375663 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.79■□□□□ 0.6
VARS-215ENST00000375663 MAN1B1Q9UKM7 699 aa18.79■□□□□ 0.6
VARS-215ENST00000375663 CCNT1O60563 726 aaKnown RBP18.79■□□□□ 0.6
VARS-215ENST00000375663 PARP1P09874 1014 aaKnown RBP18.79■□□□□ 0.6
VARS-215ENST00000375663 PTGDRQ13258 359 aa18.79■□□□□ 0.6
VARS-215ENST00000375663 ZRSR2Q15696 482 aaKnown RBP18.79■□□□□ 0.6
VARS-215ENST00000375663 NBPF14Q5TI25 921 aa18.79■□□□□ 0.6
VARS-215ENST00000375663 B4GALNT4Q76KP1 1039 aa18.79■□□□□ 0.6
VARS-215ENST00000375663 GSDMAQ96QA5 445 aa18.79■□□□□ 0.6
VARS-215ENST00000375663 PARD6BQ9BYG5 372 aa18.79■□□□□ 0.6
VARS-215ENST00000375663 IFIH1Q9BYX4 1025 aaKnown RBP18.79■□□□□ 0.6
VARS-215ENST00000375663 OSBPL5Q9H0X9 879 aaPredicted RBP18.79■□□□□ 0.6
VARS-215ENST00000375663 FAM207AQ9NSI2 230 aaPredicted RBP18.79■□□□□ 0.6
VARS-215ENST00000375663 PDE8BO95263 885 aa18.78■□□□□ 0.6
VARS-215ENST00000375663 PPFIA1Q13136 1202 aa18.78■□□□□ 0.6
VARS-215ENST00000375663 FOXP1Q9H334 677 aaPredicted RBP18.78■□□□□ 0.6
VARS-215ENST00000375663 USP17L12C9JPN9 530 aa18.78■□□□□ 0.6
VARS-215ENST00000375663 USP17L21D6R901 530 aa18.78■□□□□ 0.6
VARS-215ENST00000375663 KRT13P13646 458 aa18.78■□□□□ 0.6
VARS-215ENST00000375663 CCDC84Q86UT8 332 aaPredicted RBP18.78■□□□□ 0.6
VARS-215ENST00000375663 GREM2Q9H772 168 aa18.78■□□□□ 0.6
VARS-215ENST00000375663 INPP5BP32019 993 aa18.78■□□□□ 0.6
VARS-215ENST00000375663 NR5A1Q13285 461 aa18.78■□□□□ 0.6
VARS-215ENST00000375663 CEP57Q86XR8 500 aa18.78■□□□□ 0.6
VARS-215ENST00000375663 IFT20Q8IY31 132 aa18.78■□□□□ 0.6
VARS-215ENST00000375663 CEP152O94986 1710 aa18.78■□□□□ 0.6
VARS-215ENST00000375663 H7C1D1 291 aa18.78■□□□□ 0.6
VARS-215ENST00000375663 PICALMQ13492 652 aa18.78■□□□□ 0.6
VARS-215ENST00000375663 FAM47AQ5JRC9 791 aa18.78■□□□□ 0.6
VARS-215ENST00000375663 SMYD4Q8IYR2 804 aaPredicted RBP18.78■□□□□ 0.6
VARS-215ENST00000375663 ARID4AP29374 1257 aaPredicted RBP18.77■□□□□ 0.6
VARS-215ENST00000375663 TYW1BQ6NUM6 668 aa18.77■□□□□ 0.6
VARS-215ENST00000375663 TICAM2Q86XR7 235 aa18.77■□□□□ 0.6
VARS-215ENST00000375663 C2CD5Q86YS7 1000 aa18.77■□□□□ 0.6
VARS-215ENST00000375663 ARHGEF40Q8TER5 1519 aa18.77■□□□□ 0.6
VARS-215ENST00000375663 A2ML1A8K2U0 1454 aa18.77■□□□□ 0.6
VARS-215ENST00000375663 DNM2P50570 870 aa18.77■□□□□ 0.6
VARS-215ENST00000375663 RBL2Q08999 1139 aa18.77■□□□□ 0.6
VARS-215ENST00000375663 DDB1Q16531 1140 aa18.77■□□□□ 0.6
VARS-215ENST00000375663 SLC9C1Q4G0N8 1177 aa18.77■□□□□ 0.6
VARS-215ENST00000375663 GOLGA5Q8TBA6 731 aa18.77■□□□□ 0.6
VARS-215ENST00000375663 EEF2KMTQ96G04 330 aa18.77■□□□□ 0.6
VARS-215ENST00000375663 GTPBP6O43824 516 aaPredicted RBP18.77■□□□□ 0.59
VARS-215ENST00000375663 COBLO75128 1261 aa18.77■□□□□ 0.59
VARS-215ENST00000375663 NONOQ15233 471 aaKnown RBP eCLIP18.77■□□□□ 0.59
VARS-215ENST00000375663 CCDC65Q8IXS2 484 aa18.77■□□□□ 0.59
VARS-215ENST00000375663 PLCD3Q8N3E9 789 aa18.77■□□□□ 0.59
VARS-215ENST00000375663 COPB1P53618 953 aaKnown RBP18.76■□□□□ 0.59
VARS-215ENST00000375663 TSGA10IPQ3SY00 556 aa18.76■□□□□ 0.59
VARS-215ENST00000375663 DYMQ7RTS9 669 aa18.76■□□□□ 0.59
VARS-215ENST00000375663 CABP7Q86V35 215 aa18.76■□□□□ 0.59
VARS-215ENST00000375663 SMARCC2Q8TAQ2 1214 aa18.76■□□□□ 0.59
VARS-215ENST00000375663 ALDH8A1Q9H2A2 487 aaPredicted RBP18.76■□□□□ 0.59
VARS-215ENST00000375663 A6NNZ2 444 aa18.76■□□□□ 0.59
VARS-215ENST00000375663 HIBADHP31937 336 aaKnown RBP18.76■□□□□ 0.59
VARS-215ENST00000375663 TUBB8Q3ZCM7 444 aa18.76■□□□□ 0.59
VARS-215ENST00000375663 UBLCP1Q8WVY7 318 aaPredicted RBP18.76■□□□□ 0.59
VARS-215ENST00000375663 ZSCAN10Q96SZ4 725 aaPredicted RBP18.76■□□□□ 0.59
VARS-215ENST00000375663 MED4Q9NPJ6 270 aa18.76■□□□□ 0.59
VARS-215ENST00000375663 LRWD1Q9UFC0 647 aa18.76■□□□□ 0.59
VARS-215ENST00000375663 RASAL2Q9UJF2 1139 aa18.76■□□□□ 0.59
VARS-215ENST00000375663 SH2B2O14492 632 aaPredicted RBP18.76■□□□□ 0.59
VARS-215ENST00000375663 IFNAR1P17181 557 aa18.76■□□□□ 0.59
VARS-215ENST00000375663 ADD2P35612 726 aa18.76■□□□□ 0.59
VARS-215ENST00000375663 SOWAHDA6NJG2 315 aa18.76■□□□□ 0.59
VARS-215ENST00000375663 SMIM23A6NLE4 172 aa18.76■□□□□ 0.59
VARS-215ENST00000375663 F8W031 263 aaPredicted RBP18.76■□□□□ 0.59
VARS-215ENST00000375663 FMNL1O95466 1100 aaPredicted RBP18.76■□□□□ 0.59
VARS-215ENST00000375663 NF2P35240 595 aa18.76■□□□□ 0.59
VARS-215ENST00000375663 TPTE2Q6XPS3 522 aa18.76■□□□□ 0.59
VARS-215ENST00000375663 SELENOSQ9BQE4 189 aa18.76■□□□□ 0.59
VARS-215ENST00000375663 PRPHP41219 470 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms