RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 NLRP12P59046 1061 aa13.77□□□□□ -0.2
C9orf3-203ENST00000375315 TUBB2AQ13885 445 aa13.77□□□□□ -0.2
C9orf3-203ENST00000375315 PPP2R5AQ15172 486 aa13.77□□□□□ -0.2
C9orf3-203ENST00000375315 VGLL2Q8N8G2 317 aa13.77□□□□□ -0.2
C9orf3-203ENST00000375315 TUBB2BQ9BVA1 445 aa13.77□□□□□ -0.2
C9orf3-203ENST00000375315 HMG20BQ9P0W2 317 aa13.77□□□□□ -0.2
C9orf3-203ENST00000375315 RIC1Q4ADV7 1423 aa13.77□□□□□ -0.2
C9orf3-203ENST00000375315 IKBKBO14920 756 aa13.77□□□□□ -0.21
C9orf3-203ENST00000375315 SLC27A2O14975 620 aa13.77□□□□□ -0.21
C9orf3-203ENST00000375315 RNF40O75150 1001 aa13.77□□□□□ -0.21
C9orf3-203ENST00000375315 SKIDA1Q1XH10 827 aa13.77□□□□□ -0.21
C9orf3-203ENST00000375315 KCNV1Q6PIU1 500 aa13.77□□□□□ -0.21
C9orf3-203ENST00000375315 TXNRD3Q86VQ6 643 aa13.77□□□□□ -0.21
C9orf3-203ENST00000375315 PNKPQ96T60 521 aa13.77□□□□□ -0.21
C9orf3-203ENST00000375315 BAG1Q99933 345 aaPredicted RBP13.77□□□□□ -0.21
C9orf3-203ENST00000375315 PUF60Q9UHX1 559 aaKnown RBP13.77□□□□□ -0.21
C9orf3-203ENST00000375315 FAM169AQ9Y6X4 670 aa13.77□□□□□ -0.21
C9orf3-203ENST00000375315 HIP1O00291 1037 aa13.77□□□□□ -0.21
C9orf3-203ENST00000375315 RNF113AO15541 343 aaKnown RBP13.77□□□□□ -0.21
C9orf3-203ENST00000375315 INPP5BP32019 993 aa13.77□□□□□ -0.21
C9orf3-203ENST00000375315 RDXP35241 583 aaKnown RBP13.77□□□□□ -0.21
C9orf3-203ENST00000375315 FBXW10Q5XX13 1052 aa13.77□□□□□ -0.21
C9orf3-203ENST00000375315 WWC2Q6AWC2 1192 aa13.77□□□□□ -0.21
C9orf3-203ENST00000375315 RAB11FIP4Q86YS3 637 aa13.77□□□□□ -0.21
C9orf3-203ENST00000375315 SUGCTQ9HAC7 445 aa13.77□□□□□ -0.21
C9orf3-203ENST00000375315 GPR108Q9NPR9 543 aa13.77□□□□□ -0.21
C9orf3-203ENST00000375315 MROH5Q6ZUA9 1318 aa13.76□□□□□ -0.21
C9orf3-203ENST00000375315 ADD1P35611 737 aaKnown RBP13.76□□□□□ -0.21
C9orf3-203ENST00000375315 DDR1Q08345 913 aa13.76□□□□□ -0.21
C9orf3-203ENST00000375315 TOB2Q14106 344 aaPredicted RBP13.76□□□□□ -0.21
C9orf3-203ENST00000375315 NEDD9Q14511 834 aa13.76□□□□□ -0.21
C9orf3-203ENST00000375315 NCAPHQ15003 741 aa13.76□□□□□ -0.21
C9orf3-203ENST00000375315 ISM2Q6H9L7 571 aa13.76□□□□□ -0.21
C9orf3-203ENST00000375315 VSTM4Q8IW00 320 aa13.76□□□□□ -0.21
C9orf3-203ENST00000375315 FMR1NBQ8N0W7 255 aaPredicted RBP13.76□□□□□ -0.21
C9orf3-203ENST00000375315 MAGEB6Q8N7X4 407 aa13.76□□□□□ -0.21
C9orf3-203ENST00000375315 CDC23Q9UJX2 597 aa13.76□□□□□ -0.21
C9orf3-203ENST00000375315 KIF3CO14782 793 aa13.76□□□□□ -0.21
C9orf3-203ENST00000375315 STX10O60499 249 aa13.76□□□□□ -0.21
C9orf3-203ENST00000375315 HSP90B1P14625 803 aaKnown RBP13.76□□□□□ -0.21
C9orf3-203ENST00000375315 NBPF20Q3BBV1 942 aa13.76□□□□□ -0.21
C9orf3-203ENST00000375315 SAMD1Q6SPF0 538 aaPredicted RBP13.76□□□□□ -0.21
C9orf3-203ENST00000375315 SLC3A2P08195 630 aaKnown RBP13.75□□□□□ -0.21
C9orf3-203ENST00000375315 NAA16Q6N069 864 aaPredicted RBP13.75□□□□□ -0.21
C9orf3-203ENST00000375315 SPATA5Q8NB90 893 aa13.75□□□□□ -0.21
C9orf3-203ENST00000375315 MAP4K1Q92918 833 aa13.75□□□□□ -0.21
C9orf3-203ENST00000375315 CABS1Q96KC9 395 aa13.75□□□□□ -0.21
C9orf3-203ENST00000375315 USP28Q96RU2 1077 aa13.75□□□□□ -0.21
C9orf3-203ENST00000375315 JPH2Q9BR39 696 aaPredicted RBP13.75□□□□□ -0.21
C9orf3-203ENST00000375315 MAST3O60307 1309 aa13.75□□□□□ -0.21
C9orf3-203ENST00000375315 MMP10P09238 476 aa13.75□□□□□ -0.21
C9orf3-203ENST00000375315 CCT5P48643 541 aa13.75□□□□□ -0.21
C9orf3-203ENST00000375315 FOSBP53539 338 aa13.75□□□□□ -0.21
C9orf3-203ENST00000375315 FTOQ9C0B1 505 aaKnown RBP eCLIP13.75□□□□□ -0.21
C9orf3-203ENST00000375315 VIPAS39Q9H9C1 493 aa13.75□□□□□ -0.21
C9orf3-203ENST00000375315 BIN1O00499 593 aa13.75□□□□□ -0.21
C9orf3-203ENST00000375315 TMEM139Q8IV31 216 aa13.75□□□□□ -0.21
C9orf3-203ENST00000375315 ZNF532Q9HCE3 1301 aa13.75□□□□□ -0.21
C9orf3-203ENST00000375315 RIMBP2O15034 1052 aa13.74□□□□□ -0.21
C9orf3-203ENST00000375315 ATP1A3P13637 1013 aa13.74□□□□□ -0.21
C9orf3-203ENST00000375315 PPP1R1BQ9UD71 204 aaPredicted RBP13.74□□□□□ -0.21
C9orf3-203ENST00000375315 RHOXF2BP0C7M4 288 aa13.74□□□□□ -0.21
C9orf3-203ENST00000375315 ELF1P32519 619 aa13.74□□□□□ -0.21
C9orf3-203ENST00000375315 VSNL1P62760 191 aa13.74□□□□□ -0.21
C9orf3-203ENST00000375315 GOLGA8FQ08AF8 430 aa13.74□□□□□ -0.21
C9orf3-203ENST00000375315 GOLGA8DPQ0D2H9 430 aa13.74□□□□□ -0.21
C9orf3-203ENST00000375315 KARSQ15046 597 aaKnown RBP13.74□□□□□ -0.21
C9orf3-203ENST00000375315 GRIPAP1Q4V328 841 aa13.74□□□□□ -0.21
C9orf3-203ENST00000375315 SLC27A3Q5K4L6 730 aa13.74□□□□□ -0.21
C9orf3-203ENST00000375315 TBC1D22AQ8WUA7 517 aa13.74□□□□□ -0.21
C9orf3-203ENST00000375315 RHOXF2Q9BQY4 288 aa13.74□□□□□ -0.21
C9orf3-203ENST00000375315 INCENPQ9NQS7 918 aa13.74□□□□□ -0.21
C9orf3-203ENST00000375315 COL4A1P02462 1669 aa13.74□□□□□ -0.21
C9orf3-203ENST00000375315 THSD7AQ9UPZ6 1657 aa13.74□□□□□ -0.21
C9orf3-203ENST00000375315 SHTN1A0MZ66 631 aa13.73□□□□□ -0.21
C9orf3-203ENST00000375315 H0YHG0 523 aa13.73□□□□□ -0.21
C9orf3-203ENST00000375315 SCP2P22307 547 aa13.73□□□□□ -0.21
C9orf3-203ENST00000375315 AARSP49588 968 aaKnown RBP eCLIP13.73□□□□□ -0.21
C9orf3-203ENST00000375315 MAP2K1Q02750 393 aaPredicted RBP13.73□□□□□ -0.21
C9orf3-203ENST00000375315 SF3B3Q15393 1217 aaKnown RBP13.73□□□□□ -0.21
C9orf3-203ENST00000375315 PRPF38AQ8NAV1 312 aaKnown RBP13.73□□□□□ -0.21
C9orf3-203ENST00000375315 CARMIL3Q8ND23 1372 aa13.73□□□□□ -0.21
C9orf3-203ENST00000375315 MIEF2Q96C03 454 aa13.73□□□□□ -0.21
C9orf3-203ENST00000375315 A0A1W2PQ27 194 aa13.73□□□□□ -0.21
C9orf3-203ENST00000375315 A0A1W2PQ64 194 aa13.73□□□□□ -0.21
C9orf3-203ENST00000375315 A0A1W2PQD8 194 aa13.73□□□□□ -0.21
C9orf3-203ENST00000375315 C6orf229H3BNL8 230 aa13.73□□□□□ -0.21
C9orf3-203ENST00000375315 GPAA1O43292 621 aa13.73□□□□□ -0.21
C9orf3-203ENST00000375315 MYO1BO43795 1136 aa13.73□□□□□ -0.21
C9orf3-203ENST00000375315 CYP21A2P08686 494 aa13.73□□□□□ -0.21
C9orf3-203ENST00000375315 HSPD1P10809 573 aaKnown RBP13.73□□□□□ -0.21
C9orf3-203ENST00000375315 SCRN1Q12765 414 aa13.73□□□□□ -0.21
C9orf3-203ENST00000375315 CAVIN4Q5BKX8 364 aa13.73□□□□□ -0.21
C9orf3-203ENST00000375315 ADALQ6DHV7 355 aa13.73□□□□□ -0.21
C9orf3-203ENST00000375315 PDILTQ8N807 584 aa13.73□□□□□ -0.21
C9orf3-203ENST00000375315 ARMT1Q9H993 441 aa13.73□□□□□ -0.21
C9orf3-203ENST00000375315 VEZTQ9HBM0 779 aa13.73□□□□□ -0.21
C9orf3-203ENST00000375315 BRWD3Q6RI45 1802 aa13.73□□□□□ -0.21
C9orf3-203ENST00000375315 A0A1B0GVL5 298 aa13.73□□□□□ -0.21
C9orf3-203ENST00000375315 KIF5CO60282 957 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms