RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 NBPF7P0C2Y1 421 aaPredicted RBP21.71■■□□□ 1.07
H2AFX-201ENST00000375167 RAB30Q15771 203 aa21.71■■□□□ 1.07
H2AFX-201ENST00000375167 MICALL1Q8N3F8 863 aa21.71■■□□□ 1.07
H2AFX-201ENST00000375167 GRXCR1A8MXD5 290 aa21.7■■□□□ 1.06
H2AFX-201ENST00000375167 PHF24Q9UPV7 400 aa21.7■■□□□ 1.06
H2AFX-201ENST00000375167 ZNF236Q9UL36 1845 aa21.7■■□□□ 1.06
H2AFX-201ENST00000375167 FAM86C2PA6NEL3 165 aa21.69■■□□□ 1.06
H2AFX-201ENST00000375167 SKIV2LQ15477 1246 aaKnown RBP21.69■■□□□ 1.06
H2AFX-201ENST00000375167 OLFML2BQ68BL8 750 aa21.69■■□□□ 1.06
H2AFX-201ENST00000375167 ANKRD44Q8N8A2 993 aa21.69■■□□□ 1.06
H2AFX-201ENST00000375167 SLC44A5Q8NCS7 719 aa21.69■■□□□ 1.06
H2AFX-201ENST00000375167 C11orf16Q9NQ32 467 aa21.69■■□□□ 1.06
H2AFX-201ENST00000375167 LRRC37A2A6NM11 1700 aa21.69■■□□□ 1.06
H2AFX-201ENST00000375167 CHD9Q3L8U1 2897 aa21.68■■□□□ 1.06
H2AFX-201ENST00000375167 CNMDO75829 334 aa21.68■■□□□ 1.06
H2AFX-201ENST00000375167 IGHA2P01877 340 aa21.68■■□□□ 1.06
H2AFX-201ENST00000375167 RHBDL3P58872 404 aa21.68■■□□□ 1.06
H2AFX-201ENST00000375167 DPP9Q86TI2 863 aa21.68■■□□□ 1.06
H2AFX-201ENST00000375167 ABCF2Q9UG63 623 aa21.68■■□□□ 1.06
H2AFX-201ENST00000375167 ERC2O15083 957 aa21.67■■□□□ 1.06
H2AFX-201ENST00000375167 PPIGQ13427 754 aaKnown RBP eCLIP21.67■■□□□ 1.068e-7■■■□□ 14.9
H2AFX-201ENST00000375167 FAM47AQ5JRC9 791 aa21.67■■□□□ 1.06
H2AFX-201ENST00000375167 SPTY2D1Q68D10 685 aaPredicted RBP21.67■■□□□ 1.06
H2AFX-201ENST00000375167 SLC28A3Q9HAS3 691 aa21.67■■□□□ 1.06
H2AFX-201ENST00000375167 GPR75-ASB3A0A0A6YYF3 556 aa21.66■■□□□ 1.06
H2AFX-201ENST00000375167 DCDC2CA8MYV0 355 aa21.66■■□□□ 1.06
H2AFX-201ENST00000375167 EYA2O00167 538 aa21.66■■□□□ 1.06
H2AFX-201ENST00000375167 MAP4K4O95819 1239 aaPredicted RBP21.66■■□□□ 1.06
H2AFX-201ENST00000375167 ATP2B3Q16720 1220 aa21.66■■□□□ 1.06
H2AFX-201ENST00000375167 RASIP1Q5U651 963 aa21.66■■□□□ 1.06
H2AFX-201ENST00000375167 HERVK_113Q902F9 699 aa21.66■■□□□ 1.06
H2AFX-201ENST00000375167 XIRP2A4UGR9 3374 aa21.66■■□□□ 1.06
H2AFX-201ENST00000375167 GBF1Q92538 1859 aa21.66■■□□□ 1.06
H2AFX-201ENST00000375167 TIMP1P01033 207 aa21.65■■□□□ 1.06
H2AFX-201ENST00000375167 PHKA1P46020 1223 aa21.65■■□□□ 1.06
H2AFX-201ENST00000375167 TMEM240Q5SV17 173 aa21.65■■□□□ 1.06
H2AFX-201ENST00000375167 USP17L2Q6R6M4 530 aa21.65■■□□□ 1.06
H2AFX-201ENST00000375167 NKX2-4Q9H2Z4 354 aa21.65■■□□□ 1.06
H2AFX-201ENST00000375167 EMILIN3Q9NT22 766 aa21.65■■□□□ 1.06
H2AFX-201ENST00000375167 GINM1Q9NU53 330 aa21.65■■□□□ 1.06
H2AFX-201ENST00000375167 SIPA1L1O43166 1804 aa21.64■■□□□ 1.06
H2AFX-201ENST00000375167 VAMP4O75379 141 aa21.64■■□□□ 1.06
H2AFX-201ENST00000375167 PSRC1Q6PGN9 363 aaPredicted RBP21.64■■□□□ 1.06
H2AFX-201ENST00000375167 TOX2Q96NM4 488 aa21.64■■□□□ 1.06
H2AFX-201ENST00000375167 XPNPEP3Q9NQH7 507 aa21.64■■□□□ 1.06
H2AFX-201ENST00000375167 A0A1W2PQ45 241 aaPredicted RBP21.63■■□□□ 1.05
H2AFX-201ENST00000375167 A0A1W2PQY0 241 aa21.63■■□□□ 1.05
H2AFX-201ENST00000375167 USP17L15C9J2P7 530 aa21.63■■□□□ 1.05
H2AFX-201ENST00000375167 USP17L13C9JLJ4 530 aa21.63■■□□□ 1.05
H2AFX-201ENST00000375167 USP17L11C9JVI0 530 aa21.63■■□□□ 1.05
H2AFX-201ENST00000375167 USP17L18D6R9N7 530 aa21.63■■□□□ 1.05
H2AFX-201ENST00000375167 USP17L22D6RA61 530 aa21.63■■□□□ 1.05
H2AFX-201ENST00000375167 USP17L17D6RBQ6 530 aa21.63■■□□□ 1.05
H2AFX-201ENST00000375167 USP17L19D6RCP7 530 aa21.63■■□□□ 1.05
H2AFX-201ENST00000375167 USP17L20D6RJB6 530 aa21.63■■□□□ 1.05
H2AFX-201ENST00000375167 SMIM22K7EJ46 135 aa21.63■■□□□ 1.05
H2AFX-201ENST00000375167 ANP32CO43423 234 aa21.63■■□□□ 1.05
H2AFX-201ENST00000375167 FAAP100Q0VG06 881 aa21.63■■□□□ 1.05
H2AFX-201ENST00000375167 USP17L24Q0WX57 530 aa21.63■■□□□ 1.05
H2AFX-201ENST00000375167 MFSD5Q6N075 450 aa21.63■■□□□ 1.05
H2AFX-201ENST00000375167 ANKRD33Q7Z3H0 272 aa21.63■■□□□ 1.05
H2AFX-201ENST00000375167 RNF180Q86T96 592 aa21.63■■□□□ 1.05
H2AFX-201ENST00000375167 PI4KBQ9UBF8 816 aa21.63■■□□□ 1.05
H2AFX-201ENST00000375167 IL16Q14005 1332 aa21.63■■□□□ 1.05
H2AFX-201ENST00000375167 RARBP10826 455 aa21.62■■□□□ 1.05
H2AFX-201ENST00000375167 ADORA2AP29274 412 aa21.62■■□□□ 1.05
H2AFX-201ENST00000375167 TRIM34Q9BYJ4 488 aa21.62■■□□□ 1.05
H2AFX-201ENST00000375167 ZBTB21Q9ULJ3 1066 aa21.62■■□□□ 1.05
H2AFX-201ENST00000375167 FANCIQ9NVI1 1328 aa21.62■■□□□ 1.05
H2AFX-201ENST00000375167 MECOMQ03112 1051 aa21.61■■□□□ 1.05
H2AFX-201ENST00000375167 MTIF3Q9H2K0 278 aaKnown RBP21.61■■□□□ 1.05
H2AFX-201ENST00000375167 SLC5A4Q9NY91 659 aa21.61■■□□□ 1.05
H2AFX-201ENST00000375167 PDS5AQ29RF7 1337 aaKnown RBP21.61■■□□□ 1.05
H2AFX-201ENST00000375167 ZBTB22O15209 634 aa21.61■■□□□ 1.05
H2AFX-201ENST00000375167 GDF11O95390 407 aa21.61■■□□□ 1.05
H2AFX-201ENST00000375167 JAG1P78504 1218 aa21.61■■□□□ 1.05
H2AFX-201ENST00000375167 CCDC27Q2M243 656 aa21.61■■□□□ 1.05
H2AFX-201ENST00000375167 LBX2Q6XYB7 198 aa21.61■■□□□ 1.05
H2AFX-201ENST00000375167 C16orf59Q7L2K0 433 aa21.61■■□□□ 1.05
H2AFX-201ENST00000375167 C12orf42Q96LP6 360 aa21.61■■□□□ 1.05
H2AFX-201ENST00000375167 FEZ1Q99689 392 aa21.61■■□□□ 1.05
H2AFX-201ENST00000375167 DHX36Q9H2U1 1008 aaKnown RBP21.61■■□□□ 1.05
H2AFX-201ENST00000375167 BTBD7Q9P203 1132 aa21.61■■□□□ 1.05
H2AFX-201ENST00000375167 TBX21Q9UL17 535 aa21.61■■□□□ 1.05
H2AFX-201ENST00000375167 COG5Q9UP83 839 aa21.61■■□□□ 1.05
H2AFX-201ENST00000375167 CACNA1AO00555 2505 aa21.6■■□□□ 1.05
H2AFX-201ENST00000375167 REV3LO60673 3130 aa21.6■■□□□ 1.05
H2AFX-201ENST00000375167 PRR33A8MZF0 331 aa21.6■■□□□ 1.05
H2AFX-201ENST00000375167 STRNO43815 780 aa21.6■■□□□ 1.05
H2AFX-201ENST00000375167 RASGRF1Q13972 1273 aa21.6■■□□□ 1.05
H2AFX-201ENST00000375167 PRAMEF19Q5SWL8 479 aa21.6■■□□□ 1.05
H2AFX-201ENST00000375167 ZNF365Q70YC5 407 aa21.6■■□□□ 1.05
H2AFX-201ENST00000375167 ERICH6Q7L0X2 663 aa21.6■■□□□ 1.05
H2AFX-201ENST00000375167 WWC1Q8IX03 1113 aa21.6■■□□□ 1.05
H2AFX-201ENST00000375167 TEX11Q8IYF3 940 aa21.6■■□□□ 1.05
H2AFX-201ENST00000375167 CRACR2BQ8N4Y2 399 aaPredicted RBP21.6■■□□□ 1.05
H2AFX-201ENST00000375167 TMEM199Q8N511 208 aa21.6■■□□□ 1.05
H2AFX-201ENST00000375167 KHSRPQ92945 711 aaKnown RBP eCLIP21.6■■□□□ 1.05
H2AFX-201ENST00000375167 CHD7Q9P2D1 2997 aa21.59■■□□□ 1.05
H2AFX-201ENST00000375167 PI4K2BG5E9Z4 385 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms