RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 LLPHQ9BRT6 129 aaKnown RBP20.16■□□□□ 0.82
HLA-DMA-201ENST00000374843 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.16■□□□□ 0.82
HLA-DMA-201ENST00000374843 PHF20L1A8MW92 1017 aa20.15■□□□□ 0.82
HLA-DMA-201ENST00000374843 HSP90AA1P07900 732 aaKnown RBP20.15■□□□□ 0.82
HLA-DMA-201ENST00000374843 GUCY1A2P33402 732 aa20.15■□□□□ 0.82
HLA-DMA-201ENST00000374843 TROAPQ12815 778 aa20.15■□□□□ 0.82
HLA-DMA-201ENST00000374843 CATIPQ7Z7H3 387 aa20.15■□□□□ 0.82
HLA-DMA-201ENST00000374843 MAP3K14Q99558 947 aa20.15■□□□□ 0.82
HLA-DMA-201ENST00000374843 GINM1Q9NU53 330 aa20.15■□□□□ 0.82
HLA-DMA-201ENST00000374843 SYNPO2Q9UMS6 1093 aa20.15■□□□□ 0.82
HLA-DMA-201ENST00000374843 TTLL1O95922 423 aa20.14■□□□□ 0.81
HLA-DMA-201ENST00000374843 CALM1P0DP23 149 aa20.14■□□□□ 0.81
HLA-DMA-201ENST00000374843 CALM2P0DP24 149 aa20.14■□□□□ 0.81
HLA-DMA-201ENST00000374843 CALM3P0DP25 149 aa20.14■□□□□ 0.81
HLA-DMA-201ENST00000374843 TOP1P11387 765 aaKnown RBP20.14■□□□□ 0.81
HLA-DMA-201ENST00000374843 METAP2P50579 478 aaKnown RBP eCLIP20.14■□□□□ 0.81
HLA-DMA-201ENST00000374843 STK3Q13188 491 aa20.14■□□□□ 0.81
HLA-DMA-201ENST00000374843 PPP2R5BQ15173 497 aa20.14■□□□□ 0.81
HLA-DMA-201ENST00000374843 SYNE3Q6ZMZ3 975 aa20.14■□□□□ 0.81
HLA-DMA-201ENST00000374843 MICU3Q86XE3 530 aa20.14■□□□□ 0.81
HLA-DMA-201ENST00000374843 TMEM47Q9BQJ4 181 aa20.14■□□□□ 0.81
HLA-DMA-201ENST00000374843 KAT14Q9H8E8 782 aa20.14■□□□□ 0.81
HLA-DMA-201ENST00000374843 KANSL2Q9H9L4 492 aa20.14■□□□□ 0.81
HLA-DMA-201ENST00000374843 ZNF112Q9UJU3 913 aa20.14■□□□□ 0.81
HLA-DMA-201ENST00000374843 ZBTB21Q9ULJ3 1066 aa20.14■□□□□ 0.81
HLA-DMA-201ENST00000374843 DOCK1Q14185 1865 aa20.13■□□□□ 0.81
HLA-DMA-201ENST00000374843 GOLGA8AA7E2F4 631 aa20.13■□□□□ 0.81
HLA-DMA-201ENST00000374843 ADM5C9JUS6 153 aa20.13■□□□□ 0.81
HLA-DMA-201ENST00000374843 MPHOSPH10O00566 681 aaKnown RBP20.13■□□□□ 0.81
HLA-DMA-201ENST00000374843 DHX16O60231 1041 aaKnown RBP20.13■□□□□ 0.81
HLA-DMA-201ENST00000374843 GDF11O95390 407 aa20.13■□□□□ 0.81
HLA-DMA-201ENST00000374843 VEGFAP15692 232 aaPredicted RBP20.13■□□□□ 0.81
HLA-DMA-201ENST00000374843 CAP2P40123 477 aa20.13■□□□□ 0.81
HLA-DMA-201ENST00000374843 JAG1P78504 1218 aa20.13■□□□□ 0.81
HLA-DMA-201ENST00000374843 SHROOM1Q2M3G4 852 aaPredicted RBP20.13■□□□□ 0.81
HLA-DMA-201ENST00000374843 SUPT20HL1Q3ZLR7 823 aa20.13■□□□□ 0.81
HLA-DMA-201ENST00000374843 MIGA2Q7L4E1 593 aa20.13■□□□□ 0.81
HLA-DMA-201ENST00000374843 KRT26Q7Z3Y9 468 aa20.13■□□□□ 0.81
HLA-DMA-201ENST00000374843 PNMA1Q8ND90 353 aa20.13■□□□□ 0.81
HLA-DMA-201ENST00000374843 ZNF341Q9BYN7 854 aa20.13■□□□□ 0.81
HLA-DMA-201ENST00000374843 NCOA5Q9HCD5 579 aaKnown RBP20.13■□□□□ 0.81
HLA-DMA-201ENST00000374843 CWC22Q9HCG8 908 aaKnown RBP20.13■□□□□ 0.81
HLA-DMA-201ENST00000374843 FAM217BQ9NTX9 383 aaPredicted RBP20.13■□□□□ 0.81
HLA-DMA-201ENST00000374843 NYAP2Q9P242 653 aa20.13■□□□□ 0.81
HLA-DMA-201ENST00000374843 STX8Q9UNK0 236 aa20.13■□□□□ 0.81
HLA-DMA-201ENST00000374843 ATAD5Q96QE3 1844 aa20.13■□□□□ 0.81
HLA-DMA-201ENST00000374843 GH2P01242 217 aa20.12■□□□□ 0.81
HLA-DMA-201ENST00000374843 ICA1Q05084 483 aa20.12■□□□□ 0.81
HLA-DMA-201ENST00000374843 RTN1Q16799 776 aa20.12■□□□□ 0.81
HLA-DMA-201ENST00000374843 NSUN7Q8NE18 718 aaKnown RBP20.12■□□□□ 0.81
HLA-DMA-201ENST00000374843 SMARCC2Q8TAQ2 1214 aa20.12■□□□□ 0.81
HLA-DMA-201ENST00000374843 MKL1Q969V6 931 aa20.12■□□□□ 0.81
HLA-DMA-201ENST00000374843 MYL10Q9BUA6 226 aa20.12■□□□□ 0.81
HLA-DMA-201ENST00000374843 CABP5Q9NP86 173 aa20.12■□□□□ 0.81
HLA-DMA-201ENST00000374843 NAP1L2Q9ULW6 460 aaPredicted RBP20.12■□□□□ 0.81
HLA-DMA-201ENST00000374843 CTDNEP1O95476 244 aa20.11■□□□□ 0.81
HLA-DMA-201ENST00000374843 CCT2P78371 535 aaKnown RBP20.11■□□□□ 0.81
HLA-DMA-201ENST00000374843 SEPT2Q15019 361 aa20.11■□□□□ 0.81
HLA-DMA-201ENST00000374843 EAPPQ56P03 285 aaPredicted RBP20.11■□□□□ 0.81
HLA-DMA-201ENST00000374843 CLEC10AQ8IUN9 316 aa20.11■□□□□ 0.81
HLA-DMA-201ENST00000374843 RBM28Q9NW13 759 aaKnown RBP20.11■□□□□ 0.81
HLA-DMA-201ENST00000374843 CIZ1Q9ULV3 898 aaPredicted RBP20.11■□□□□ 0.81
HLA-DMA-201ENST00000374843 POLR2AP24928 1970 aaKnown RBP20.1■□□□□ 0.81
HLA-DMA-201ENST00000374843 CCDC196A0A1B0GTZ2 297 aa20.1■□□□□ 0.81
HLA-DMA-201ENST00000374843 CTNND1O60716 968 aaKnown RBP20.1■□□□□ 0.81
HLA-DMA-201ENST00000374843 ASNSP08243 561 aa20.1■□□□□ 0.81
HLA-DMA-201ENST00000374843 RXRAP19793 462 aa20.1■□□□□ 0.81
HLA-DMA-201ENST00000374843 CDC27P30260 824 aa20.1■□□□□ 0.81
HLA-DMA-201ENST00000374843 GRM4Q14833 912 aa20.1■□□□□ 0.81
HLA-DMA-201ENST00000374843 NTRK3Q16288 839 aa20.1■□□□□ 0.81
HLA-DMA-201ENST00000374843 RAB11FIP4Q86YS3 637 aa20.1■□□□□ 0.81
HLA-DMA-201ENST00000374843 FANCBQ8NB91 859 aa20.1■□□□□ 0.81
HLA-DMA-201ENST00000374843 SPRYD3Q8NCJ5 442 aa20.1■□□□□ 0.81
HLA-DMA-201ENST00000374843 SMC3Q9UQE7 1217 aa20.1■□□□□ 0.81
HLA-DMA-201ENST00000374843 MYH4Q9Y623 1939 aa20.1■□□□□ 0.81
HLA-DMA-201ENST00000374843 CDKL5O76039 1030 aa20.09■□□□□ 0.81
HLA-DMA-201ENST00000374843 SNHG28P0DPA3 235 aa20.09■□□□□ 0.81
HLA-DMA-201ENST00000374843 HMGN5P82970 282 aaKnown RBP20.09■□□□□ 0.81
HLA-DMA-201ENST00000374843 NOL9Q5SY16 702 aaKnown RBP20.09■□□□□ 0.81
HLA-DMA-201ENST00000374843 PRAMEF18Q5VWM3 479 aa20.09■□□□□ 0.81
HLA-DMA-201ENST00000374843 CDC37L1Q7L3B6 337 aa20.09■□□□□ 0.81
HLA-DMA-201ENST00000374843 LDHDQ86WU2 507 aa20.09■□□□□ 0.81
HLA-DMA-201ENST00000374843 SIAH1Q8IUQ4 282 aa20.09■□□□□ 0.81
HLA-DMA-201ENST00000374843 CDCA5Q96FF9 252 aa20.09■□□□□ 0.81
HLA-DMA-201ENST00000374843 FOXD4L1Q9NU39 408 aa20.09■□□□□ 0.81
HLA-DMA-201ENST00000374843 OTOFQ9HC10 1997 aa20.08■□□□□ 0.81
HLA-DMA-201ENST00000374843 STK36Q9NRP7 1315 aa20.08■□□□□ 0.81
HLA-DMA-201ENST00000374843 PTPDC1A2A3K4 754 aa20.08■□□□□ 0.81
HLA-DMA-201ENST00000374843 EEF2P13639 858 aaKnown RBP20.08■□□□□ 0.81
HLA-DMA-201ENST00000374843 KIF5BP33176 963 aa20.08■□□□□ 0.81
HLA-DMA-201ENST00000374843 CPLX2Q6PUV4 134 aaKnown RBP20.08■□□□□ 0.81
HLA-DMA-201ENST00000374843 TMTC3Q6ZXV5 915 aa20.08■□□□□ 0.81
HLA-DMA-201ENST00000374843 LRRC47Q8N1G4 583 aaKnown RBP20.08■□□□□ 0.81
HLA-DMA-201ENST00000374843 NUP133Q8WUM0 1156 aa20.08■□□□□ 0.81
HLA-DMA-201ENST00000374843 KLRG1Q96E93 195 aa20.08■□□□□ 0.81
HLA-DMA-201ENST00000374843 RRAGCQ9HB90 399 aa20.08■□□□□ 0.81
HLA-DMA-201ENST00000374843 JAK2O60674 1132 aa20.07■□□□□ 0.8
HLA-DMA-201ENST00000374843 IFNAR1P17181 557 aa20.07■□□□□ 0.8
HLA-DMA-201ENST00000374843 ADD1P35611 737 aaKnown RBP20.07■□□□□ 0.8
HLA-DMA-201ENST00000374843 FUT2Q10981 343 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms