RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 PSMA3P25788 255 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 SCNN1AP37088 669 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 MNAT1P51948 309 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 GRAMD1BQ3KR37 738 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 CCDC152Q4G0S7 254 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 CCDC30Q5VVM6 783 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 C7orf57Q8NEG2 295 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 GIMAP7Q8NHV1 300 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 EZH1Q92800 747 aaPredicted RBP8.99□□□□□ -0.97
USP48-203ENST00000374732 CEP295NLQ96MC4 621 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 APBA2Q99767 749 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 PLEKHA5Q9HAU0 1116 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 ANO2Q9NQ90 1003 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 SNRKQ9NRH2 765 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 ATG3Q9NT62 314 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 QPCTLQ9NXS2 382 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 RCAN3Q9UKA8 241 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 NRXN3Q9Y4C0 1643 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 KIF1AQ12756 1690 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 MCM2P49736 904 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 RRP1P56182 461 aaKnown RBP8.99□□□□□ -0.97
USP48-203ENST00000374732 KAZNQ674X7 775 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 TMC6Q7Z403 805 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 SDCCAG8Q86SQ7 713 aaPredicted RBP8.99□□□□□ -0.97
USP48-203ENST00000374732 SLAIN1Q8ND83 568 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 CTNNBL1Q8WYA6 563 aaPredicted RBP8.99□□□□□ -0.97
USP48-203ENST00000374732 PGBD4Q96DM1 585 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 TTC14Q96N46 770 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 SERINC2Q96SA4 455 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 TSGA10Q9BZW7 698 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 GRPEL1Q9HAV7 217 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 PPP2R3BQ9Y5P8 575 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.98□□□□□ -0.97
USP48-203ENST00000374732 DNAJC6O75061 913 aa8.98□□□□□ -0.97
USP48-203ENST00000374732 ZBTB17Q13105 803 aa8.98□□□□□ -0.97
USP48-203ENST00000374732 LRRC43Q8N309 656 aa8.98□□□□□ -0.97
USP48-203ENST00000374732 GBP7Q8N8V2 638 aaPredicted RBP8.98□□□□□ -0.97
USP48-203ENST00000374732 ZNF446Q9NWS9 450 aa8.98□□□□□ -0.97
USP48-203ENST00000374732 CCDC163A0A0D9SF12 145 aa8.98□□□□□ -0.97
USP48-203ENST00000374732 STK25O00506 426 aa8.98□□□□□ -0.97
USP48-203ENST00000374732 KRT10P13645 584 aa8.98□□□□□ -0.97
USP48-203ENST00000374732 POLD2P49005 469 aa8.98□□□□□ -0.97
USP48-203ENST00000374732 CAPRIN2Q6IMN6 1127 aaKnown RBP8.98□□□□□ -0.97
USP48-203ENST00000374732 FAM76AQ8TAV0 307 aa8.98□□□□□ -0.97
USP48-203ENST00000374732 RTF1Q92541 710 aaKnown RBP8.98□□□□□ -0.97
USP48-203ENST00000374732 ZBTB10Q96DT7 871 aa8.98□□□□□ -0.97
USP48-203ENST00000374732 ALPK1Q96QP1 1244 aa8.98□□□□□ -0.97
USP48-203ENST00000374732 CAPN10Q9HC96 672 aa8.98□□□□□ -0.97
USP48-203ENST00000374732 ADAMTS8Q9UP79 889 aa8.98□□□□□ -0.97
USP48-203ENST00000374732 SLC30A1Q9Y6M5 507 aa8.98□□□□□ -0.97
USP48-203ENST00000374732 POLR3AO14802 1390 aaPredicted RBP8.97□□□□□ -0.97
USP48-203ENST00000374732 C21orf2O43822 256 aa8.97□□□□□ -0.97
USP48-203ENST00000374732 PLIN1O60240 522 aa8.97□□□□□ -0.97
USP48-203ENST00000374732 GPS2Q13227 327 aa8.97□□□□□ -0.97
USP48-203ENST00000374732 ACAP1Q15027 740 aa8.97□□□□□ -0.97
USP48-203ENST00000374732 TMEM95Q3KNT9 176 aa8.97□□□□□ -0.97
USP48-203ENST00000374732 ARMC4Q5T2S8 1044 aa8.97□□□□□ -0.97
USP48-203ENST00000374732 LINC00469Q8N7U9 141 aa8.97□□□□□ -0.97
USP48-203ENST00000374732 JAKMIP2Q96AA8 810 aa8.97□□□□□ -0.97
USP48-203ENST00000374732 E2F7Q96AV8 911 aa8.97□□□□□ -0.97
USP48-203ENST00000374732 DHTKD1Q96HY7 919 aaPredicted RBP8.97□□□□□ -0.97
USP48-203ENST00000374732 BICC1Q9H694 974 aaKnown RBP8.97□□□□□ -0.97
USP48-203ENST00000374732 LUZP4Q9P127 313 aa8.97□□□□□ -0.97
USP48-203ENST00000374732 ZNF521Q96K83 1311 aa8.97□□□□□ -0.97
USP48-203ENST00000374732 GOLGA6L19H0YKK7 550 aa8.97□□□□□ -0.97
USP48-203ENST00000374732 KLHL41O60662 606 aa8.97□□□□□ -0.97
USP48-203ENST00000374732 WDR43Q15061 677 aaKnown RBP eCLIP8.97□□□□□ -0.97
USP48-203ENST00000374732 NANOGNBQ7Z5D8 188 aa8.97□□□□□ -0.97
USP48-203ENST00000374732 SPATS2Q86XZ4 545 aaKnown RBP8.97□□□□□ -0.97
USP48-203ENST00000374732 GPIHBP1Q8IV16 184 aa8.97□□□□□ -0.97
USP48-203ENST00000374732 EIF2AK1Q9BQI3 630 aaKnown RBP8.97□□□□□ -0.97
USP48-203ENST00000374732 TSPY26PQ9H489 355 aa8.97□□□□□ -0.97
USP48-203ENST00000374732 CDC42BPGQ6DT37 1551 aa8.97□□□□□ -0.97
USP48-203ENST00000374732 LRRC72A6NJI9 287 aa8.97□□□□□ -0.97
USP48-203ENST00000374732 RHOBTB3O94955 611 aa8.97□□□□□ -0.97
USP48-203ENST00000374732 HSPA1LP34931 641 aa8.97□□□□□ -0.97
USP48-203ENST00000374732 USP11P51784 963 aa8.97□□□□□ -0.97
USP48-203ENST00000374732 SPDYCQ5MJ68 293 aa8.97□□□□□ -0.97
USP48-203ENST00000374732 RNF20Q5VTR2 975 aa8.97□□□□□ -0.97
USP48-203ENST00000374732 TAOK1Q7L7X3 1001 aa8.97□□□□□ -0.97
USP48-203ENST00000374732 SKA1Q96BD8 255 aa8.97□□□□□ -0.97
USP48-203ENST00000374732 ALG1Q9BT22 464 aa8.97□□□□□ -0.97
USP48-203ENST00000374732 CARD14Q9BXL6 1004 aa8.97□□□□□ -0.97
USP48-203ENST00000374732 BRD8Q9H0E9 1235 aa8.97□□□□□ -0.97
USP48-203ENST00000374732 CNNM2Q9H8M5 875 aa8.97□□□□□ -0.97
USP48-203ENST00000374732 SEPT10Q9P0V9 454 aa8.97□□□□□ -0.97
USP48-203ENST00000374732 PFDN2Q9UHV9 154 aa8.97□□□□□ -0.97
USP48-203ENST00000374732 GNEQ9Y223 722 aaKnown RBP8.97□□□□□ -0.97
USP48-203ENST00000374732 TRIM17Q9Y577 477 aa8.97□□□□□ -0.97
USP48-203ENST00000374732 RTCAO00442 366 aaKnown RBP8.96□□□□□ -0.97
USP48-203ENST00000374732 AGR2O95994 175 aa8.96□□□□□ -0.97
USP48-203ENST00000374732 KRT18P05783 430 aaKnown RBP8.96□□□□□ -0.97
USP48-203ENST00000374732 VIMP08670 466 aaKnown RBP8.96□□□□□ -0.97
USP48-203ENST00000374732 GZMAP12544 262 aa8.96□□□□□ -0.97
USP48-203ENST00000374732 EPB42P16452 691 aa8.96□□□□□ -0.97
USP48-203ENST00000374732 TNFAIP3P21580 790 aa8.96□□□□□ -0.97
USP48-203ENST00000374732 RAB27AP51159 221 aa8.96□□□□□ -0.97
USP48-203ENST00000374732 KSR2Q6VAB6 950 aa8.96□□□□□ -0.97
USP48-203ENST00000374732 ATF7IPQ6VMQ6 1270 aa8.96□□□□□ -0.97
USP48-203ENST00000374732 LRRC49Q8IUZ0 686 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms