RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 BSDC1Q9NW68 430 aaPredicted RBP15.99■□□□□ 0.15
HMGCL-203ENST00000374490 KIF3CO14782 793 aa15.98■□□□□ 0.15
HMGCL-203ENST00000374490 INCENPQ9NQS7 918 aa15.98■□□□□ 0.15
HMGCL-203ENST00000374490 RAI14Q9P0K7 980 aa15.98■□□□□ 0.15
HMGCL-203ENST00000374490 TNRC6CQ9HCJ0 1690 aaKnown RBP15.98■□□□□ 0.15
HMGCL-203ENST00000374490 BTBD18B2RXH4 712 aa15.97■□□□□ 0.15
HMGCL-203ENST00000374490 ZBTB22O15209 634 aa15.97■□□□□ 0.15
HMGCL-203ENST00000374490 IGSF3O75054 1194 aa15.97■□□□□ 0.15
HMGCL-203ENST00000374490 NT5C2P49902 561 aa15.97■□□□□ 0.15
HMGCL-203ENST00000374490 ARID5BQ14865 1188 aa15.97■□□□□ 0.15
HMGCL-203ENST00000374490 SEC23AQ15436 765 aa15.97■□□□□ 0.15
HMGCL-203ENST00000374490 PDCL2Q8N4E4 241 aa15.97■□□□□ 0.15
HMGCL-203ENST00000374490 FBXO2Q9UK22 296 aaPredicted RBP15.97■□□□□ 0.15
HMGCL-203ENST00000374490 TAF1P21675 1872 aa15.97■□□□□ 0.15
HMGCL-203ENST00000374490 TNKSO95271 1327 aa15.97■□□□□ 0.15
HMGCL-203ENST00000374490 SNAP23O00161 211 aa15.97■□□□□ 0.15
HMGCL-203ENST00000374490 ST5P78524 1137 aa15.97■□□□□ 0.15
HMGCL-203ENST00000374490 CT47A1Q5JQC4 288 aaPredicted RBP15.97■□□□□ 0.15
HMGCL-203ENST00000374490 METTL16Q86W50 562 aaKnown RBP15.97■□□□□ 0.15
HMGCL-203ENST00000374490 STK11IPQ8N1F8 1099 aa15.97■□□□□ 0.15
HMGCL-203ENST00000374490 CCDC24Q8N4L8 307 aa15.97■□□□□ 0.15
HMGCL-203ENST00000374490 MIGA1Q8NAN2 632 aa15.97■□□□□ 0.15
HMGCL-203ENST00000374490 KIF18AQ8NI77 898 aa15.97■□□□□ 0.15
HMGCL-203ENST00000374490 CLIC6Q96NY7 704 aa15.97■□□□□ 0.15
HMGCL-203ENST00000374490 SRPRBQ9Y5M8 271 aaKnown RBP15.97■□□□□ 0.15
HMGCL-203ENST00000374490 DDAH1O94760 285 aa15.96■□□□□ 0.15
HMGCL-203ENST00000374490 PNOCQ13519 176 aa15.96■□□□□ 0.15
HMGCL-203ENST00000374490 CATIPQ7Z7H3 387 aa15.96■□□□□ 0.15
HMGCL-203ENST00000374490 MLKLQ8NB16 471 aa15.96■□□□□ 0.15
HMGCL-203ENST00000374490 RIOK1Q9BRS2 568 aaKnown RBP15.96■□□□□ 0.15
HMGCL-203ENST00000374490 COL4A1P02462 1669 aa15.96■□□□□ 0.15
HMGCL-203ENST00000374490 DUOX1Q9NRD9 1551 aa15.96■□□□□ 0.14
HMGCL-203ENST00000374490 PRPF3O43395 683 aaKnown RBP15.95■□□□□ 0.14
HMGCL-203ENST00000374490 SERPINC1P01008 464 aa15.95■□□□□ 0.14
HMGCL-203ENST00000374490 FGRP09769 529 aa15.95■□□□□ 0.14
HMGCL-203ENST00000374490 LMOD1P29536 600 aaPredicted RBP15.95■□□□□ 0.14
HMGCL-203ENST00000374490 GUCY1A2P33402 732 aa15.95■□□□□ 0.14
HMGCL-203ENST00000374490 TOB1P50616 345 aaPredicted RBP15.95■□□□□ 0.14
HMGCL-203ENST00000374490 UBASH3AP57075 661 aa15.95■□□□□ 0.14
HMGCL-203ENST00000374490 RPS8P62241 208 aaKnown RBP15.95■□□□□ 0.14
HMGCL-203ENST00000374490 POSTNQ15063 836 aa15.95■□□□□ 0.14
HMGCL-203ENST00000374490 LONRF3Q496Y0 759 aa15.95■□□□□ 0.14
HMGCL-203ENST00000374490 NT5DC1Q5TFE4 455 aa15.95■□□□□ 0.14
HMGCL-203ENST00000374490 ARMCX5Q6P1M9 558 aa15.95■□□□□ 0.14
HMGCL-203ENST00000374490 FCHSD1Q86WN1 690 aa15.95■□□□□ 0.14
HMGCL-203ENST00000374490 IQCA1Q86XH1 822 aa15.95■□□□□ 0.14
HMGCL-203ENST00000374490 NUP133Q8WUM0 1156 aa15.95■□□□□ 0.14
HMGCL-203ENST00000374490 CELF1Q92879 486 aaKnown RBP15.95■□□□□ 0.14
HMGCL-203ENST00000374490 ZSCAN10Q96SZ4 725 aaPredicted RBP15.95■□□□□ 0.14
HMGCL-203ENST00000374490 ZKSCAN3Q9BRR0 538 aa15.95■□□□□ 0.14
HMGCL-203ENST00000374490 BRMS1Q9HCU9 246 aa15.95■□□□□ 0.14
HMGCL-203ENST00000374490 PIM2Q9P1W9 311 aa15.95■□□□□ 0.14
HMGCL-203ENST00000374490 ABCF2Q9UG63 623 aa15.95■□□□□ 0.14
HMGCL-203ENST00000374490 PCDHA5Q9Y5H7 936 aa15.95■□□□□ 0.14
HMGCL-203ENST00000374490 MINDY4BA8MYZ0 360 aa15.94■□□□□ 0.14
HMGCL-203ENST00000374490 KRT2P35908 639 aa15.94■□□□□ 0.14
HMGCL-203ENST00000374490 MDM2Q00987 491 aaPredicted RBP15.94■□□□□ 0.14
HMGCL-203ENST00000374490 PRR5LQ6MZQ0 368 aa15.94■□□□□ 0.14
HMGCL-203ENST00000374490 TSC1Q92574 1164 aa15.94■□□□□ 0.14
HMGCL-203ENST00000374490 CGNQ9P2M7 1197 aaKnown RBP15.94■□□□□ 0.14
HMGCL-203ENST00000374490 KCNJ14Q9UNX9 436 aa15.94■□□□□ 0.14
HMGCL-203ENST00000374490 TRIM75PA6NK02 468 aa15.94■□□□□ 0.14
HMGCL-203ENST00000374490 TOMM70O94826 608 aa15.94■□□□□ 0.14
HMGCL-203ENST00000374490 SERPINB2P05120 415 aa15.94■□□□□ 0.14
HMGCL-203ENST00000374490 VSTM4Q8IW00 320 aa15.94■□□□□ 0.14
HMGCL-203ENST00000374490 SMARCE1Q969G3 411 aa15.94■□□□□ 0.14
HMGCL-203ENST00000374490 ANKRD2Q9GZV1 360 aa15.94■□□□□ 0.14
HMGCL-203ENST00000374490 HSD3B7Q9H2F3 369 aa15.94■□□□□ 0.14
HMGCL-203ENST00000374490 COL1A1P02452 1464 aaPredicted RBP15.93■□□□□ 0.14
HMGCL-203ENST00000374490 USP27XA6NNY8 438 aa15.93■□□□□ 0.14
HMGCL-203ENST00000374490 ORC4O43929 436 aa15.93■□□□□ 0.14
HMGCL-203ENST00000374490 GYG1P46976 350 aa15.93■□□□□ 0.14
HMGCL-203ENST00000374490 NCBP1Q09161 790 aaKnown RBP15.93■□□□□ 0.14
HMGCL-203ENST00000374490 DALRD3Q5D0E6 543 aaKnown RBP15.93■□□□□ 0.14
HMGCL-203ENST00000374490 IFIT1BQ5T764 474 aaKnown RBP15.93■□□□□ 0.14
HMGCL-203ENST00000374490 FBXO33Q7Z6M2 555 aa15.93■□□□□ 0.14
HMGCL-203ENST00000374490 ADGRA1Q86SQ6 560 aa15.93■□□□□ 0.14
HMGCL-203ENST00000374490 ENOX1Q8TC92 643 aaKnown RBP15.93■□□□□ 0.14
HMGCL-203ENST00000374490 SDR42E1Q8WUS8 393 aa15.93■□□□□ 0.14
HMGCL-203ENST00000374490 ZNF592Q92610 1267 aa15.93■□□□□ 0.14
HMGCL-203ENST00000374490 FERMT2Q96AC1 680 aa15.93■□□□□ 0.14
HMGCL-203ENST00000374490 ERO1AQ96HE7 468 aa15.93■□□□□ 0.14
HMGCL-203ENST00000374490 PHF20Q9BVI0 1012 aa15.93■□□□□ 0.14
HMGCL-203ENST00000374490 AATFQ9NY61 560 aaKnown RBP eCLIP15.93■□□□□ 0.14
HMGCL-203ENST00000374490 MAN1B1Q9UKM7 699 aa15.93■□□□□ 0.14
HMGCL-203ENST00000374490 MINPP1Q9UNW1 487 aa15.93■□□□□ 0.14
HMGCL-203ENST00000374490 TOP1P11387 765 aaKnown RBP15.92■□□□□ 0.14
HMGCL-203ENST00000374490 PRKCSHP14314 528 aaPredicted RBP15.92■□□□□ 0.14
HMGCL-203ENST00000374490 TM4SF1P30408 202 aa15.92■□□□□ 0.14
HMGCL-203ENST00000374490 SARSP49591 514 aaKnown RBP15.92■□□□□ 0.14
HMGCL-203ENST00000374490 APLP1P51693 650 aa15.92■□□□□ 0.14
HMGCL-203ENST00000374490 MORC3Q14149 939 aa15.92■□□□□ 0.14
HMGCL-203ENST00000374490 CFAP100Q494V2 611 aa15.92■□□□□ 0.14
HMGCL-203ENST00000374490 SMAP1Q8IYB5 467 aaPredicted RBP15.92■□□□□ 0.14
HMGCL-203ENST00000374490 ENAHQ8N8S7 591 aaPredicted RBP15.92■□□□□ 0.14
HMGCL-203ENST00000374490 RPGRQ92834 1020 aaKnown RBP15.92■□□□□ 0.14
HMGCL-203ENST00000374490 FEZ1Q99689 392 aa15.92■□□□□ 0.14
HMGCL-203ENST00000374490 PYM1Q9BRP8 204 aaKnown RBP15.92■□□□□ 0.14
HMGCL-203ENST00000374490 CRNKL1Q9BZJ0 848 aaKnown RBP15.92■□□□□ 0.14
HMGCL-203ENST00000374490 CACNA1SQ13698 1873 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms