RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 CNMDO75829 334 aa15.45■□□□□ 0.06
HDAC8-204ENST00000373560 IGHA2P01877 340 aa15.45■□□□□ 0.06
HDAC8-204ENST00000373560 FGFR2P21802 821 aa15.45■□□□□ 0.06
HDAC8-204ENST00000373560 FPGSQ05932 587 aa15.45■□□□□ 0.06
HDAC8-204ENST00000373560 MFSD14CQ5VZR4 134 aa15.45■□□□□ 0.06
HDAC8-204ENST00000373560 MICALL1Q8N3F8 863 aa15.45■□□□□ 0.06
HDAC8-204ENST00000373560 KLHDC4Q8TBB5 520 aa15.45■□□□□ 0.06
HDAC8-204ENST00000373560 WDFY4Q6ZS81 3184 aa15.45■□□□□ 0.06
HDAC8-204ENST00000373560 CACNA1AO00555 2505 aa15.44■□□□□ 0.06
HDAC8-204ENST00000373560 GPR37L1O60883 481 aa15.44■□□□□ 0.06
HDAC8-204ENST00000373560 PDE8BO95263 885 aa15.44■□□□□ 0.06
HDAC8-204ENST00000373560 SEC24BO95487 1268 aa15.44■□□□□ 0.06
HDAC8-204ENST00000373560 CLTBP09497 229 aa15.44■□□□□ 0.06
HDAC8-204ENST00000373560 C7P10643 843 aa15.44■□□□□ 0.06
HDAC8-204ENST00000373560 WDR66Q8TBY9 1149 aa15.44■□□□□ 0.06
HDAC8-204ENST00000373560 EDC3Q96F86 508 aaKnown RBP15.44■□□□□ 0.06
HDAC8-204ENST00000373560 GAKO14976 1311 aa15.43■□□□□ 0.06
HDAC8-204ENST00000373560 KBTBD13C9JR72 458 aa15.43■□□□□ 0.06
HDAC8-204ENST00000373560 APAF1O14727 1248 aa15.43■□□□□ 0.06
HDAC8-204ENST00000373560 KIAA0355O15063 1070 aa15.43■□□□□ 0.06
HDAC8-204ENST00000373560 MSCO60682 206 aa15.43■□□□□ 0.06
HDAC8-204ENST00000373560 HOXA7P31268 230 aaPredicted RBP15.43■□□□□ 0.06
HDAC8-204ENST00000373560 TWISTNBQ3B726 338 aaPredicted RBP15.43■□□□□ 0.06
HDAC8-204ENST00000373560 CCDC129Q6ZRS4 1044 aa15.43■□□□□ 0.06
HDAC8-204ENST00000373560 C16orf59Q7L2K0 433 aa15.43■□□□□ 0.06
HDAC8-204ENST00000373560 NKX2-4Q9H2Z4 354 aa15.43■□□□□ 0.06
HDAC8-204ENST00000373560 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.43■□□□□ 0.06
HDAC8-204ENST00000373560 CD320Q9NPF0 282 aa15.43■□□□□ 0.06
HDAC8-204ENST00000373560 CACNA1FO60840 1977 aa15.43■□□□□ 0.06
HDAC8-204ENST00000373560 ZNF236Q9UL36 1845 aa15.43■□□□□ 0.06
HDAC8-204ENST00000373560 USP17L5A8MUK1 530 aa15.42■□□□□ 0.06
HDAC8-204ENST00000373560 LDHBP07195 334 aaKnown RBP15.42■□□□□ 0.06
HDAC8-204ENST00000373560 RAG1P15918 1043 aa15.42■□□□□ 0.06
HDAC8-204ENST00000373560 ZEB1P37275 1124 aaPredicted RBP15.42■□□□□ 0.06
HDAC8-204ENST00000373560 LRRC41Q15345 812 aa15.42■□□□□ 0.06
HDAC8-204ENST00000373560 FAM47AQ5JRC9 791 aa15.42■□□□□ 0.06
HDAC8-204ENST00000373560 EFCAB3Q8N7B9 438 aa15.42■□□□□ 0.06
HDAC8-204ENST00000373560 CCER1Q8TC90 406 aaPredicted RBP15.42■□□□□ 0.06
HDAC8-204ENST00000373560 OSBPL5Q9H0X9 879 aaPredicted RBP15.42■□□□□ 0.06
HDAC8-204ENST00000373560 YBX2Q9Y2T7 364 aaKnown RBP15.42■□□□□ 0.06
HDAC8-204ENST00000373560 PQBP1O60828 265 aaKnown RBP15.41■□□□□ 0.06
HDAC8-204ENST00000373560 CAP2P40123 477 aa15.41■□□□□ 0.06
HDAC8-204ENST00000373560 NHLH1Q02575 133 aa15.41■□□□□ 0.06
HDAC8-204ENST00000373560 RASIP1Q5U651 963 aa15.41■□□□□ 0.06
HDAC8-204ENST00000373560 C1orf53Q5VUE5 145 aa15.41■□□□□ 0.06
HDAC8-204ENST00000373560 TACC3Q9Y6A5 838 aa15.41■□□□□ 0.06
HDAC8-204ENST00000373560 KIF16BQ96L93 1317 aa15.41■□□□□ 0.06
HDAC8-204ENST00000373560 A0A0G2JMZ2 1700 aa15.4■□□□□ 0.06
HDAC8-204ENST00000373560 TRANK1O15050 2925 aa15.4■□□□□ 0.06
HDAC8-204ENST00000373560 TBC1D12O60347 775 aa15.4■□□□□ 0.06
HDAC8-204ENST00000373560 PTPREP23469 700 aa15.4■□□□□ 0.06
HDAC8-204ENST00000373560 BTDP43251 543 aa15.4■□□□□ 0.06
HDAC8-204ENST00000373560 ATP2B2Q01814 1243 aa15.4■□□□□ 0.06
HDAC8-204ENST00000373560 WDR43Q15061 677 aaKnown RBP eCLIP15.4■□□□□ 0.06
HDAC8-204ENST00000373560 TMEM240Q5SV17 173 aa15.4■□□□□ 0.06
HDAC8-204ENST00000373560 IER5LQ5T953 404 aa15.4■□□□□ 0.06
HDAC8-204ENST00000373560 WDR78Q5VTH9 848 aa15.4■□□□□ 0.06
HDAC8-204ENST00000373560 SMIM22K7EJ46 135 aa15.39■□□□□ 0.05
HDAC8-204ENST00000373560 BACE1P56817 501 aa15.39■□□□□ 0.05
HDAC8-204ENST00000373560 RHBDL3P58872 404 aa15.39■□□□□ 0.05
HDAC8-204ENST00000373560 FAAP100Q0VG06 881 aa15.39■□□□□ 0.05
HDAC8-204ENST00000373560 PUM3Q15397 648 aaKnown RBP15.39■□□□□ 0.05
HDAC8-204ENST00000373560 PRAMEF19Q5SWL8 479 aa15.39■□□□□ 0.05
HDAC8-204ENST00000373560 CCAR1Q8IX12 1150 aaKnown RBP15.39■□□□□ 0.05
HDAC8-204ENST00000373560 HS6ST3Q8IZP7 471 aa15.39■□□□□ 0.05
HDAC8-204ENST00000373560 ANKRD44Q8N8A2 993 aa15.39■□□□□ 0.05
HDAC8-204ENST00000373560 ARRDC4Q8NCT1 418 aa15.39■□□□□ 0.05
HDAC8-204ENST00000373560 BICC1Q9H694 974 aaKnown RBP15.39■□□□□ 0.05
HDAC8-204ENST00000373560 SMCHD1A6NHR9 2005 aa15.38■□□□□ 0.05
HDAC8-204ENST00000373560 PRRC2BQ5JSZ5 2229 aaKnown RBP15.38■□□□□ 0.05
HDAC8-204ENST00000373560 SLC15A5A6NIM6 579 aa15.38■□□□□ 0.05
HDAC8-204ENST00000373560 TLL1O43897 1013 aa15.38■□□□□ 0.05
HDAC8-204ENST00000373560 HOXC6P09630 235 aa15.38■□□□□ 0.05
HDAC8-204ENST00000373560 ACRP10323 421 aa15.38■□□□□ 0.05
HDAC8-204ENST00000373560 GRB14Q14449 540 aa15.38■□□□□ 0.05
HDAC8-204ENST00000373560 KRT40Q6A162 431 aa15.38■□□□□ 0.05
HDAC8-204ENST00000373560 ZNF384Q8TF68 577 aa15.38■□□□□ 0.05
HDAC8-204ENST00000373560 WDR18Q9BV38 432 aa15.38■□□□□ 0.05
HDAC8-204ENST00000373560 CWC22Q9HCG8 908 aaKnown RBP15.38■□□□□ 0.05
HDAC8-204ENST00000373560 MYBBP1AQ9BQG0 1328 aaKnown RBP15.38■□□□□ 0.05
HDAC8-204ENST00000373560 SALL1Q9NSC2 1324 aa15.38■□□□□ 0.05
HDAC8-204ENST00000373560 CDK5RAP2Q96SN8 1893 aa15.37■□□□□ 0.05
HDAC8-204ENST00000373560 ERC2O15083 957 aa15.37■□□□□ 0.05
HDAC8-204ENST00000373560 IFIT1P09914 478 aaKnown RBP15.37■□□□□ 0.05
HDAC8-204ENST00000373560 NBPF7P0C2Y1 421 aaPredicted RBP15.37■□□□□ 0.05
HDAC8-204ENST00000373560 CALD1Q05682 793 aaKnown RBP15.37■□□□□ 0.05
HDAC8-204ENST00000373560 SKIV2LQ15477 1246 aaKnown RBP15.37■□□□□ 0.05
HDAC8-204ENST00000373560 ANKS1AQ92625 1134 aa15.37■□□□□ 0.05
HDAC8-204ENST00000373560 PHOX2BQ99453 314 aa15.37■□□□□ 0.05
HDAC8-204ENST00000373560 CHMP4AQ9BY43 222 aa15.37■□□□□ 0.05
HDAC8-204ENST00000373560 TBC1D2Q9BYX2 928 aa15.37■□□□□ 0.05
HDAC8-204ENST00000373560 TMEM39AQ9NV64 488 aa15.37■□□□□ 0.05
HDAC8-204ENST00000373560 TMOD4Q9NZQ9 345 aa15.37■□□□□ 0.05
HDAC8-204ENST00000373560 BTBD7Q9P203 1132 aa15.37■□□□□ 0.05
HDAC8-204ENST00000373560 PHF24Q9UPV7 400 aa15.37■□□□□ 0.05
HDAC8-204ENST00000373560 COL4A4P53420 1690 aaPredicted RBP15.36■□□□□ 0.05
HDAC8-204ENST00000373560 RFXAPO00287 272 aa15.36■□□□□ 0.05
HDAC8-204ENST00000373560 SEPT4O43236 478 aa15.36■□□□□ 0.05
HDAC8-204ENST00000373560 PLCG2P16885 1265 aa15.36■□□□□ 0.05
HDAC8-204ENST00000373560 LENG1Q96BZ8 264 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms