RNA–Protein interactions for RNA: ENST00000373463.7

TMEM54-202, Transcript of transmembrane protein 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM54, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-202ENST00000373463 AMOTL1Q8IY63 956 aa25.43■■□□□ 1.66
TMEM54-202ENST00000373463 CABP5Q9NP86 173 aa25.43■■□□□ 1.66
TMEM54-202ENST00000373463 MPHOSPH10O00566 681 aaKnown RBP25.42■■□□□ 1.66
TMEM54-202ENST00000373463 STK11IPQ8N1F8 1099 aa25.42■■□□□ 1.66
TMEM54-202ENST00000373463 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.42■■□□□ 1.66
TMEM54-202ENST00000373463 KIAA1683Q9H0B3 1180 aa25.42■■□□□ 1.66
TMEM54-202ENST00000373463 TRIM17Q9Y577 477 aa25.42■■□□□ 1.66
TMEM54-202ENST00000373463 RASA1P20936 1047 aa25.41■■□□□ 1.66
TMEM54-202ENST00000373463 LACTBP83111 547 aaPredicted RBP25.41■■□□□ 1.66
TMEM54-202ENST00000373463 ZYXQ15942 572 aaKnown RBP25.41■■□□□ 1.66
TMEM54-202ENST00000373463 TTC22Q5TAA0 569 aa25.41■■□□□ 1.66
TMEM54-202ENST00000373463 TMEM179Q6ZVK1 233 aa25.41■■□□□ 1.66
TMEM54-202ENST00000373463 C12orf42Q96LP6 360 aa25.41■■□□□ 1.66
TMEM54-202ENST00000373463 ASCC2Q9H1I8 757 aaPredicted RBP25.41■■□□□ 1.66
TMEM54-202ENST00000373463 MCMDC2Q4G0Z9 681 aa25.4■■□□□ 1.66
TMEM54-202ENST00000373463 CCDC17Q96LX7 622 aa25.4■■□□□ 1.66
TMEM54-202ENST00000373463 MGAMO43451 1857 aa25.4■■□□□ 1.66
TMEM54-202ENST00000373463 HTTP42858 3142 aa25.39■■□□□ 1.66
TMEM54-202ENST00000373463 CAPN15O75808 1086 aa25.39■■□□□ 1.66
TMEM54-202ENST00000373463 HOXA7P31268 230 aaPredicted RBP25.39■■□□□ 1.66
TMEM54-202ENST00000373463 USP17L2Q6R6M4 530 aa25.39■■□□□ 1.66
TMEM54-202ENST00000373463 NAPBQ9H115 298 aa25.39■■□□□ 1.66
TMEM54-202ENST00000373463 TMOD4Q9NZQ9 345 aa25.39■■□□□ 1.66
TMEM54-202ENST00000373463 TACC3Q9Y6A5 838 aa25.39■■□□□ 1.66
TMEM54-202ENST00000373463 ECM2O94769 699 aaPredicted RBP25.38■■□□□ 1.65
TMEM54-202ENST00000373463 PKN2Q16513 984 aaKnown RBP25.38■■□□□ 1.65
TMEM54-202ENST00000373463 KIAA1755Q5JYT7 1200 aa25.38■■□□□ 1.65
TMEM54-202ENST00000373463 FBXO46Q6PJ61 603 aaPredicted RBP25.38■■□□□ 1.65
TMEM54-202ENST00000373463 POTEEQ6S8J3 1075 aa25.38■■□□□ 1.65
TMEM54-202ENST00000373463 FEZ1Q99689 392 aa25.38■■□□□ 1.65
TMEM54-202ENST00000373463 NACAP1Q9BZK3 213 aa25.38■■□□□ 1.65
TMEM54-202ENST00000373463 EFCC1Q9HA90 598 aa25.38■■□□□ 1.65
TMEM54-202ENST00000373463 PPARAQ07869 468 aa25.37■■□□□ 1.65
TMEM54-202ENST00000373463 SKAP1Q86WV1 359 aa25.37■■□□□ 1.65
TMEM54-202ENST00000373463 HPS5Q9UPZ3 1129 aa25.37■■□□□ 1.65
TMEM54-202ENST00000373463 CCDC171Q6TFL3 1326 aa25.37■■□□□ 1.65
TMEM54-202ENST00000373463 PRDM1O75626 825 aa25.36■■□□□ 1.65
TMEM54-202ENST00000373463 VCAM1P19320 739 aa25.36■■□□□ 1.65
TMEM54-202ENST00000373463 ALX1Q15699 326 aa25.36■■□□□ 1.65
TMEM54-202ENST00000373463 SMCR8Q8TEV9 937 aaPredicted RBP25.36■■□□□ 1.65
TMEM54-202ENST00000373463 TRIM47Q96LD4 638 aa25.36■■□□□ 1.65
TMEM54-202ENST00000373463 P2RX7Q99572 595 aaKnown RBP25.36■■□□□ 1.65
TMEM54-202ENST00000373463 IL25Q9H293 177 aa25.36■■□□□ 1.65
TMEM54-202ENST00000373463 PNMA3Q9UL41 463 aa25.36■■□□□ 1.65
TMEM54-202ENST00000373463 PTPN22Q9Y2R2 807 aa25.36■■□□□ 1.65
TMEM54-202ENST00000373463 RLFQ13129 1914 aa25.35■■□□□ 1.65
TMEM54-202ENST00000373463 PEX10O60683 326 aa25.35■■□□□ 1.65
TMEM54-202ENST00000373463 HSPD1P10809 573 aaKnown RBP25.35■■□□□ 1.65
TMEM54-202ENST00000373463 ICA1Q05084 483 aa25.35■■□□□ 1.65
TMEM54-202ENST00000373463 PABPC4Q13310 644 aaKnown RBP eCLIP25.35■■□□□ 1.651e-6■■■□□ 16.1
TMEM54-202ENST00000373463 INCENPQ9NQS7 918 aa25.35■■□□□ 1.65
TMEM54-202ENST00000373463 FGAP02671 866 aa25.34■■□□□ 1.65
TMEM54-202ENST00000373463 OSBPP22059 807 aa25.34■■□□□ 1.65
TMEM54-202ENST00000373463 USP14P54578 494 aa25.34■■□□□ 1.65
TMEM54-202ENST00000373463 CWC27Q6UX04 472 aaKnown RBP25.34■■□□□ 1.65
TMEM54-202ENST00000373463 ANKRD13CQ8N6S4 541 aa25.34■■□□□ 1.65
TMEM54-202ENST00000373463 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.34■■□□□ 1.65
TMEM54-202ENST00000373463 TMX2Q9Y320 296 aa25.34■■□□□ 1.65
TMEM54-202ENST00000373463 IGKV6D-41A0A0C4DH26 115 aa25.33■■□□□ 1.65
TMEM54-202ENST00000373463 EEF2P13639 858 aaKnown RBP25.33■■□□□ 1.65
TMEM54-202ENST00000373463 PSMC4P43686 418 aa25.33■■□□□ 1.65
TMEM54-202ENST00000373463 CTDSPL2Q05D32 466 aa25.33■■□□□ 1.65
TMEM54-202ENST00000373463 CENPQQ7L2Z9 268 aaPredicted RBP25.33■■□□□ 1.65
TMEM54-202ENST00000373463 MKNK2Q9HBH9 465 aa25.33■■□□□ 1.65
TMEM54-202ENST00000373463 TXNRD2Q9NNW7 524 aa25.33■■□□□ 1.65
TMEM54-202ENST00000373463 HERVK_113P62684 666 aa25.32■■□□□ 1.64
TMEM54-202ENST00000373463 IRX3P78415 501 aaPredicted RBP25.32■■□□□ 1.64
TMEM54-202ENST00000373463 FAM110CQ1W6H9 321 aa25.32■■□□□ 1.64
TMEM54-202ENST00000373463 KANSL2Q9H9L4 492 aa25.32■■□□□ 1.64
TMEM54-202ENST00000373463 DIAPH3Q9NSV4 1193 aa25.32■■□□□ 1.64
TMEM54-202ENST00000373463 ANAPC4Q9UJX5 808 aa25.32■■□□□ 1.64
TMEM54-202ENST00000373463 PARP14Q460N5 1801 aa25.32■■□□□ 1.64
TMEM54-202ENST00000373463 ZMYM6O95789 1325 aa25.32■■□□□ 1.64
TMEM54-202ENST00000373463 GCLCP48506 637 aaPredicted RBP25.31■■□□□ 1.64
TMEM54-202ENST00000373463 CATSPERGQ6ZRH7 1159 aa25.31■■□□□ 1.64
TMEM54-202ENST00000373463 NBPF3Q9H094 633 aa25.31■■□□□ 1.64
TMEM54-202ENST00000373463 RPAP3Q9H6T3 665 aaPredicted RBP25.31■■□□□ 1.64
TMEM54-202ENST00000373463 MORF4L1Q9UBU8 362 aa25.31■■□□□ 1.64
TMEM54-202ENST00000373463 PTCH2Q9Y6C5 1203 aa25.31■■□□□ 1.64
TMEM54-202ENST00000373463 DOCK3Q8IZD9 2030 aa25.3■■□□□ 1.64
TMEM54-202ENST00000373463 LAMA4Q16363 1823 aa25.3■■□□□ 1.64
TMEM54-202ENST00000373463 MYH4Q9Y623 1939 aa25.3■■□□□ 1.64
TMEM54-202ENST00000373463 CCDC85CA6NKD9 419 aa25.3■■□□□ 1.64
TMEM54-202ENST00000373463 USP17L15C9J2P7 530 aa25.3■■□□□ 1.64
TMEM54-202ENST00000373463 USP17L13C9JLJ4 530 aa25.3■■□□□ 1.64
TMEM54-202ENST00000373463 USP17L11C9JVI0 530 aa25.3■■□□□ 1.64
TMEM54-202ENST00000373463 USP17L18D6R9N7 530 aa25.3■■□□□ 1.64
TMEM54-202ENST00000373463 USP17L22D6RA61 530 aa25.3■■□□□ 1.64
TMEM54-202ENST00000373463 USP17L17D6RBQ6 530 aa25.3■■□□□ 1.64
TMEM54-202ENST00000373463 USP17L19D6RCP7 530 aa25.3■■□□□ 1.64
TMEM54-202ENST00000373463 USP17L20D6RJB6 530 aa25.3■■□□□ 1.64
TMEM54-202ENST00000373463 USP17L24Q0WX57 530 aa25.3■■□□□ 1.64
TMEM54-202ENST00000373463 KIF22Q14807 665 aa25.3■■□□□ 1.64
TMEM54-202ENST00000373463 VCPKMTQ9H867 229 aa25.3■■□□□ 1.64
TMEM54-202ENST00000373463 ARHGEF10LQ9HCE6 1279 aa25.3■■□□□ 1.64
TMEM54-202ENST00000373463 RBPJLQ9UBG7 517 aa25.3■■□□□ 1.64
TMEM54-202ENST00000373463 PLIN4Q96Q06 1357 aa25.3■■□□□ 1.64
TMEM54-202ENST00000373463 HIP1O00291 1037 aa25.29■■□□□ 1.64
TMEM54-202ENST00000373463 A0A0G2JMZ2 1700 aa25.29■■□□□ 1.64
TMEM54-202ENST00000373463 FGRP09769 529 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms