RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 STK11IPQ8N1F8 1099 aa11.89□□□□□ -0.51
PGK1-201ENST00000373316 SYNRGQ9UMZ2 1314 aa11.89□□□□□ -0.51
PGK1-201ENST00000373316 GLI3P10071 1580 aa11.89□□□□□ -0.51
PGK1-201ENST00000373316 TMCO5BA8MYB1 307 aa11.89□□□□□ -0.51
PGK1-201ENST00000373316 CALUO43852 315 aaPredicted RBP11.89□□□□□ -0.51
PGK1-201ENST00000373316 LINC00116Q8NCU8 138 aa11.89□□□□□ -0.51
PGK1-201ENST00000373316 TDRD7Q8NHU6 1098 aaKnown RBP11.89□□□□□ -0.51
PGK1-201ENST00000373316 CSRNP2Q9H175 543 aa11.89□□□□□ -0.51
PGK1-201ENST00000373316 KDM3AQ9Y4C1 1321 aa11.89□□□□□ -0.51
PGK1-201ENST00000373316 COL14A1Q05707 1796 aaKnown RBP11.89□□□□□ -0.51
PGK1-201ENST00000373316 IKBKBO14920 756 aa11.89□□□□□ -0.51
PGK1-201ENST00000373316 STX10O60499 249 aa11.89□□□□□ -0.51
PGK1-201ENST00000373316 RCAN1P53805 252 aa11.89□□□□□ -0.51
PGK1-201ENST00000373316 PAK1Q13153 545 aa11.89□□□□□ -0.51
PGK1-201ENST00000373316 COL9A3Q14050 684 aaPredicted RBP11.89□□□□□ -0.51
PGK1-201ENST00000373316 HEATR3Q7Z4Q2 680 aa11.89□□□□□ -0.51
PGK1-201ENST00000373316 MPNDQ8N594 471 aa11.89□□□□□ -0.51
PGK1-201ENST00000373316 MTUS1Q9ULD2 1270 aa11.89□□□□□ -0.51
PGK1-201ENST00000373316 GPAA1O43292 621 aa11.89□□□□□ -0.51
PGK1-201ENST00000373316 FOXO4P98177 505 aa11.89□□□□□ -0.51
PGK1-201ENST00000373316 APBA1Q02410 837 aa11.89□□□□□ -0.51
PGK1-201ENST00000373316 MAIP1Q8WWC4 291 aa11.89□□□□□ -0.51
PGK1-201ENST00000373316 LSG1Q9H089 658 aaKnown RBP11.89□□□□□ -0.51
PGK1-201ENST00000373316 PALLDQ8WX93 1383 aa11.89□□□□□ -0.51
PGK1-201ENST00000373316 MRC1P22897 1456 aa11.88□□□□□ -0.51
PGK1-201ENST00000373316 ZNF202O95125 648 aa11.88□□□□□ -0.51
PGK1-201ENST00000373316 NOP2P46087 812 aaKnown RBP11.88□□□□□ -0.51
PGK1-201ENST00000373316 SPECC1Q5M775 1068 aa11.88□□□□□ -0.51
PGK1-201ENST00000373316 INTS5Q6P9B9 1019 aaKnown RBP11.88□□□□□ -0.51
PGK1-201ENST00000373316 PI16Q6UXB8 463 aa11.88□□□□□ -0.51
PGK1-201ENST00000373316 SYCE1Q8N0S2 351 aa11.88□□□□□ -0.51
PGK1-201ENST00000373316 HOOK2Q96ED9 719 aa11.88□□□□□ -0.51
PGK1-201ENST00000373316 DBNDD2Q9BQY9 259 aa11.88□□□□□ -0.51
PGK1-201ENST00000373316 QTRT2Q9H974 415 aaKnown RBP11.88□□□□□ -0.51
PGK1-201ENST00000373316 MKRN1Q9UHC7 482 aaKnown RBP11.88□□□□□ -0.51
PGK1-201ENST00000373316 PALD1Q9ULE6 856 aa11.88□□□□□ -0.51
PGK1-201ENST00000373316 UBN2Q6ZU65 1347 aa11.88□□□□□ -0.51
PGK1-201ENST00000373316 JCADQ9P266 1359 aa11.88□□□□□ -0.51
PGK1-201ENST00000373316 CPA1P15085 419 aa11.88□□□□□ -0.51
PGK1-201ENST00000373316 GPR161Q8N6U8 529 aaKnown RBP11.88□□□□□ -0.51
PGK1-201ENST00000373316 ANTXR1Q9H6X2 564 aa11.88□□□□□ -0.51
PGK1-201ENST00000373316 RTEL1Q9NZ71 1219 aa11.88□□□□□ -0.51
PGK1-201ENST00000373316 SWAP70Q9UH65 585 aa11.88□□□□□ -0.51
PGK1-201ENST00000373316 GSTTP1A0A1W2PQM5 241 aa11.88□□□□□ -0.51
PGK1-201ENST00000373316 SPDYE3A6NKU9 549 aa11.88□□□□□ -0.51
PGK1-201ENST00000373316 C6orf229H3BNL8 230 aa11.88□□□□□ -0.51
PGK1-201ENST00000373316 MBD4O95243 580 aa11.88□□□□□ -0.51
PGK1-201ENST00000373316 ITGA6P23229 1130 aa11.88□□□□□ -0.51
PGK1-201ENST00000373316 PPP2R3AQ06190 1150 aa11.88□□□□□ -0.51
PGK1-201ENST00000373316 MTX1Q13505 466 aa11.88□□□□□ -0.51
PGK1-201ENST00000373316 PI4K2BQ8TCG2 481 aa11.88□□□□□ -0.51
PGK1-201ENST00000373316 NT5C3AQ9H0P0 336 aa11.88□□□□□ -0.51
PGK1-201ENST00000373316 ITGB4P16144 1822 aa11.88□□□□□ -0.51
PGK1-201ENST00000373316 LMOD1P29536 600 aaPredicted RBP11.88□□□□□ -0.51
PGK1-201ENST00000373316 MARCKSP29966 332 aaPredicted RBP11.88□□□□□ -0.51
PGK1-201ENST00000373316 AFMP43652 599 aa11.88□□□□□ -0.51
PGK1-201ENST00000373316 LMAN1P49257 510 aa11.88□□□□□ -0.51
PGK1-201ENST00000373316 MTMR3Q13615 1198 aa11.88□□□□□ -0.51
PGK1-201ENST00000373316 TTC38Q5R3I4 469 aa11.88□□□□□ -0.51
PGK1-201ENST00000373316 SEPT12Q8IYM1 358 aa11.88□□□□□ -0.51
PGK1-201ENST00000373316 GREM2Q9H772 168 aa11.88□□□□□ -0.51
PGK1-201ENST00000373316 MTMR6Q9Y217 621 aa11.88□□□□□ -0.51
PGK1-201ENST00000373316 ADAMTS7Q9UKP4 1686 aa11.88□□□□□ -0.51
PGK1-201ENST00000373316 E7EWF7 191 aa11.87□□□□□ -0.51
PGK1-201ENST00000373316 ACTN2P35609 894 aa11.87□□□□□ -0.51
PGK1-201ENST00000373316 CASP7P55210 303 aa11.87□□□□□ -0.51
PGK1-201ENST00000373316 POSTNQ15063 836 aa11.87□□□□□ -0.51
PGK1-201ENST00000373316 MAATS1Q7Z4T9 603 aa11.87□□□□□ -0.51
PGK1-201ENST00000373316 CCDC50Q8IVM0 306 aa11.87□□□□□ -0.51
PGK1-201ENST00000373316 SMARCC2Q8TAQ2 1214 aa11.87□□□□□ -0.51
PGK1-201ENST00000373316 RTCBQ9Y3I0 505 aaKnown RBP11.87□□□□□ -0.51
PGK1-201ENST00000373316 MYSM1Q5VVJ2 828 aa11.87□□□□□ -0.51
PGK1-201ENST00000373316 TNS2Q63HR2 1409 aa11.87□□□□□ -0.51
PGK1-201ENST00000373316 KIF2CQ99661 725 aa11.87□□□□□ -0.51
PGK1-201ENST00000373316 EXOC7Q9UPT5 735 aa11.87□□□□□ -0.51
PGK1-201ENST00000373316 GBP1P32455 592 aa11.87□□□□□ -0.51
PGK1-201ENST00000373316 TMC4Q7Z404 712 aa11.87□□□□□ -0.51
PGK1-201ENST00000373316 POTEDQ86YR6 584 aa11.87□□□□□ -0.51
PGK1-201ENST00000373316 IGSF22Q8N9C0 903 aa11.87□□□□□ -0.51
PGK1-201ENST00000373316 FAM227BQ96M60 508 aa11.87□□□□□ -0.51
PGK1-201ENST00000373316 SEC31BQ9NQW1 1179 aa11.87□□□□□ -0.51
PGK1-201ENST00000373316 EBAG9O00559 213 aa11.87□□□□□ -0.51
PGK1-201ENST00000373316 ERCC5P28715 1186 aaPredicted RBP11.87□□□□□ -0.51
PGK1-201ENST00000373316 AKNAD1Q5T1N1 836 aa11.87□□□□□ -0.51
PGK1-201ENST00000373316 UBA5Q9GZZ9 404 aa11.87□□□□□ -0.51
PGK1-201ENST00000373316 POLR3EQ9NVU0 708 aa11.87□□□□□ -0.51
PGK1-201ENST00000373316 KIAA1468Q9P260 1216 aa11.87□□□□□ -0.51
PGK1-201ENST00000373316 DOT1LQ8TEK3 1739 aa11.87□□□□□ -0.51
PGK1-201ENST00000373316 SALL3Q9BXA9 1300 aa11.86□□□□□ -0.51
PGK1-201ENST00000373316 EPB41P11171 864 aaKnown RBP11.86□□□□□ -0.51
PGK1-201ENST00000373316 TCERG1LQ5VWI1 586 aa11.86□□□□□ -0.51
PGK1-201ENST00000373316 KRT40Q6A162 431 aa11.86□□□□□ -0.51
PGK1-201ENST00000373316 GJD4Q96KN9 370 aaPredicted RBP11.86□□□□□ -0.51
PGK1-201ENST00000373316 WWC3Q9ULE0 1092 aa11.86□□□□□ -0.51
PGK1-201ENST00000373316 STX8Q9UNK0 236 aa11.86□□□□□ -0.51
PGK1-201ENST00000373316 ERICH4A6NGS2 130 aa11.86□□□□□ -0.51
PGK1-201ENST00000373316 NONOQ15233 471 aaKnown RBP eCLIP11.86□□□□□ -0.51
PGK1-201ENST00000373316 SAMD1Q6SPF0 538 aaPredicted RBP11.86□□□□□ -0.51
PGK1-201ENST00000373316 FAM76AQ8TAV0 307 aa11.86□□□□□ -0.51
PGK1-201ENST00000373316 KIFAP3Q92845 792 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms