RNA–Protein interactions for RNA: ENST00000373292.8

HDLBP-202, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-202ENST00000373292 CNTNAP5Q8WYK1 1306 aa12.92□□□□□ -0.34
HDLBP-202ENST00000373292 SYNE3Q6ZMZ3 975 aa12.91□□□□□ -0.34
HDLBP-202ENST00000373292 PNMA1Q8ND90 353 aa12.91□□□□□ -0.34
HDLBP-202ENST00000373292 CLIC6Q96NY7 704 aa12.91□□□□□ -0.34
HDLBP-202ENST00000373292 EYA3Q99504 573 aa12.91□□□□□ -0.34
HDLBP-202ENST00000373292 MAP3K14Q99558 947 aa12.91□□□□□ -0.34
HDLBP-202ENST00000373292 FUCA2Q9BTY2 467 aa12.91□□□□□ -0.34
HDLBP-202ENST00000373292 TDRD3Q9H7E2 651 aaKnown RBP12.91□□□□□ -0.34
HDLBP-202ENST00000373292 A0A1B0GVL5 298 aa12.91□□□□□ -0.34
HDLBP-202ENST00000373292 RBM5P52756 815 aaKnown RBP eCLIP12.91□□□□□ -0.341e-6■■□□□ 12.7
HDLBP-202ENST00000373292 SPECC1Q5M775 1068 aa12.91□□□□□ -0.34
HDLBP-202ENST00000373292 STRIP1Q5VSL9 837 aa12.91□□□□□ -0.34
HDLBP-202ENST00000373292 TMTC3Q6ZXV5 915 aa12.91□□□□□ -0.34
HDLBP-202ENST00000373292 CATIPQ7Z7H3 387 aa12.91□□□□□ -0.34
HDLBP-202ENST00000373292 GPKOWQ92917 476 aaPredicted RBP eCLIP12.91□□□□□ -0.34
HDLBP-202ENST00000373292 NOL10Q9BSC4 688 aaKnown RBP12.91□□□□□ -0.34
HDLBP-202ENST00000373292 MMP1P03956 469 aa12.91□□□□□ -0.34
HDLBP-202ENST00000373292 MYH8P13535 1937 aa12.91□□□□□ -0.34
HDLBP-202ENST00000373292 U2AF2P26368 475 aaKnown RBP eCLIP12.91□□□□□ -0.342e-6■■■□□ 14.9
HDLBP-202ENST00000373292 RRP1BQ14684 758 aaKnown RBP12.91□□□□□ -0.34
HDLBP-202ENST00000373292 SF3A1Q15459 793 aaKnown RBP12.91□□□□□ -0.34
HDLBP-202ENST00000373292 USP17L2Q6R6M4 530 aa12.91□□□□□ -0.34
HDLBP-202ENST00000373292 DIS3L2Q8IYB7 885 aaKnown RBP12.91□□□□□ -0.34
HDLBP-202ENST00000373292 KIF13BQ9NQT8 1826 aa12.91□□□□□ -0.34
HDLBP-202ENST00000373292 KLHL34Q8N239 644 aa12.9□□□□□ -0.34
HDLBP-202ENST00000373292 TMTC2Q8N394 836 aa12.9□□□□□ -0.34
HDLBP-202ENST00000373292 TEKT1Q969V4 418 aa12.9□□□□□ -0.34
HDLBP-202ENST00000373292 PSMD14O00487 310 aa12.9□□□□□ -0.34
HDLBP-202ENST00000373292 EGFRP00533 1210 aa12.9□□□□□ -0.34
HDLBP-202ENST00000373292 SHMT1P34896 483 aa12.9□□□□□ -0.34
HDLBP-202ENST00000373292 MRE11P49959 708 aa12.9□□□□□ -0.34
HDLBP-202ENST00000373292 OSBPL5Q9H0X9 879 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-202ENST00000373292 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-202ENST00000373292 ATP2B1P20020 1258 aa12.89□□□□□ -0.35
HDLBP-202ENST00000373292 ME1P48163 572 aa12.89□□□□□ -0.35
HDLBP-202ENST00000373292 PTPAQ15257 358 aa12.89□□□□□ -0.35
HDLBP-202ENST00000373292 AXDND1Q5T1B0 1012 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-202ENST00000373292 CCDC183Q5T5S1 534 aa12.89□□□□□ -0.35
HDLBP-202ENST00000373292 ZNF444Q8N0Y2 327 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-202ENST00000373292 BICD2Q8TD16 824 aa12.89□□□□□ -0.35
HDLBP-202ENST00000373292 RTEL1Q9NZ71 1219 aa12.89□□□□□ -0.35
HDLBP-202ENST00000373292 PCDHB6Q9Y5E3 794 aa12.89□□□□□ -0.35
HDLBP-202ENST00000373292 STK36Q9NRP7 1315 aa12.89□□□□□ -0.35
HDLBP-202ENST00000373292 HHIPL2Q6UWX4 724 aa12.89□□□□□ -0.35
HDLBP-202ENST00000373292 CCAR1Q8IX12 1150 aaKnown RBP12.89□□□□□ -0.35
HDLBP-202ENST00000373292 LRRC47Q8N1G4 583 aaKnown RBP12.89□□□□□ -0.35
HDLBP-202ENST00000373292 ENGASEQ8NFI3 743 aa12.89□□□□□ -0.35
HDLBP-202ENST00000373292 ZDHHC15Q96MV8 337 aa12.89□□□□□ -0.35
HDLBP-202ENST00000373292 MTA3Q9BTC8 594 aa12.89□□□□□ -0.35
HDLBP-202ENST00000373292 BRCA1P38398 1863 aaKnown RBP12.89□□□□□ -0.35
HDLBP-202ENST00000373292 AP5Z1O43299 807 aa12.89□□□□□ -0.35
HDLBP-202ENST00000373292 CDKL5O76039 1030 aa12.89□□□□□ -0.35
HDLBP-202ENST00000373292 NDUFA8P51970 172 aa12.89□□□□□ -0.35
HDLBP-202ENST00000373292 TMX4Q9H1E5 349 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-202ENST00000373292 DEXIO95424 95 aa12.88□□□□□ -0.35
HDLBP-202ENST00000373292 PCP11498 1178 aaKnown RBP12.88□□□□□ -0.35
HDLBP-202ENST00000373292 RASGRP4Q8TDF6 673 aa12.88□□□□□ -0.35
HDLBP-202ENST00000373292 CFAP45Q9UL16 551 aa12.88□□□□□ -0.35
HDLBP-202ENST00000373292 CLRN2A0PK11 232 aa12.88□□□□□ -0.35
HDLBP-202ENST00000373292 USP17L5A8MUK1 530 aa12.88□□□□□ -0.35
HDLBP-202ENST00000373292 ANO1Q5XXA6 986 aa12.88□□□□□ -0.35
HDLBP-202ENST00000373292 SGIP1Q9BQI5 828 aa12.88□□□□□ -0.35
HDLBP-202ENST00000373292 SLC3A2P08195 630 aaKnown RBP12.87□□□□□ -0.35
HDLBP-202ENST00000373292 HMGB2P26583 209 aaKnown RBP12.87□□□□□ -0.35
HDLBP-202ENST00000373292 NASPP49321 788 aaPredicted RBP12.87□□□□□ -0.35
HDLBP-202ENST00000373292 NOSTRINQ8IVI9 506 aa12.87□□□□□ -0.35
HDLBP-202ENST00000373292 NLGN2Q8NFZ4 835 aa12.87□□□□□ -0.35
HDLBP-202ENST00000373292 PHF20Q9BVI0 1012 aa12.87□□□□□ -0.35
HDLBP-202ENST00000373292 UBA5Q9GZZ9 404 aa12.87□□□□□ -0.35
HDLBP-202ENST00000373292 KAT14Q9H8E8 782 aa12.87□□□□□ -0.35
HDLBP-202ENST00000373292 CABP5Q9NP86 173 aa12.87□□□□□ -0.35
HDLBP-202ENST00000373292 KIF3AQ9Y496 699 aa12.87□□□□□ -0.35
HDLBP-202ENST00000373292 SMCHD1A6NHR9 2005 aa12.87□□□□□ -0.35
HDLBP-202ENST00000373292 FRMPD2Q68DX3 1309 aaPredicted RBP12.87□□□□□ -0.35
HDLBP-202ENST00000373292 PRPF3O43395 683 aaKnown RBP12.87□□□□□ -0.35
HDLBP-202ENST00000373292 USP49Q70CQ1 688 aa12.87□□□□□ -0.35
HDLBP-202ENST00000373292 DGKHQ86XP1 1220 aa12.87□□□□□ -0.35
HDLBP-202ENST00000373292 NEDD1Q8NHV4 660 aa12.87□□□□□ -0.35
HDLBP-202ENST00000373292 RNF26Q9BY78 433 aaPredicted RBP12.87□□□□□ -0.35
HDLBP-202ENST00000373292 POLR3EQ9NVU0 708 aa12.87□□□□□ -0.35
HDLBP-202ENST00000373292 PSME4Q14997 1843 aa12.87□□□□□ -0.35
HDLBP-202ENST00000373292 DDAH1O94760 285 aa12.87□□□□□ -0.35
HDLBP-202ENST00000373292 CFAP100Q494V2 611 aa12.87□□□□□ -0.35
HDLBP-202ENST00000373292 CPLX2Q6PUV4 134 aaKnown RBP12.87□□□□□ -0.35
HDLBP-202ENST00000373292 SUGT1Q9Y2Z0 365 aa12.87□□□□□ -0.35
HDLBP-202ENST00000373292 SPTLC2O15270 562 aa12.86□□□□□ -0.35
HDLBP-202ENST00000373292 SHC4Q6S5L8 630 aa12.86□□□□□ -0.35
HDLBP-202ENST00000373292 SIAH1Q8IUQ4 282 aa12.86□□□□□ -0.35
HDLBP-202ENST00000373292 TRIM22Q8IYM9 498 aa12.86□□□□□ -0.35
HDLBP-202ENST00000373292 LARGE2Q8N3Y3 721 aa12.86□□□□□ -0.35
HDLBP-202ENST00000373292 ANKS1AQ92625 1134 aa12.86□□□□□ -0.35
HDLBP-202ENST00000373292 RTN4Q9NQC3 1192 aaKnown RBP12.86□□□□□ -0.35
HDLBP-202ENST00000373292 SERPINB13Q9UIV8 391 aa12.86□□□□□ -0.35
HDLBP-202ENST00000373292 NFKBIEO00221 500 aa12.86□□□□□ -0.35
HDLBP-202ENST00000373292 PDIA4P13667 645 aaKnown RBP12.86□□□□□ -0.35
HDLBP-202ENST00000373292 PLCG2P16885 1265 aa12.86□□□□□ -0.35
HDLBP-202ENST00000373292 TNFRSF25Q93038 417 aa12.86□□□□□ -0.35
HDLBP-202ENST00000373292 GMLQ99445 158 aa12.86□□□□□ -0.35
HDLBP-202ENST00000373292 MYH4Q9Y623 1939 aa12.86□□□□□ -0.35
HDLBP-202ENST00000373292 GOLGA6L4A6NEF3 574 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms