RNA–Protein interactions for RNA: ENST00000372857.7

PABPC4-202, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 3,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-202ENST00000372857 ECM29Q5VYK3 1845 aa17.92■□□□□ 0.46
PABPC4-202ENST00000372857 GUCY2CP25092 1073 aa17.91■□□□□ 0.46
PABPC4-202ENST00000372857 TMEM67Q5HYA8 995 aa17.91■□□□□ 0.46
PABPC4-202ENST00000372857 CNGA4Q8IV77 575 aa17.91■□□□□ 0.46
PABPC4-202ENST00000372857 DNAJC10Q8IXB1 793 aa17.91■□□□□ 0.46
PABPC4-202ENST00000372857 MICALL1Q8N3F8 863 aa17.91■□□□□ 0.46
PABPC4-202ENST00000372857 STAMQ92783 540 aa17.91■□□□□ 0.46
PABPC4-202ENST00000372857 HINFPQ9BQA5 517 aa17.91■□□□□ 0.46
PABPC4-202ENST00000372857 FILIP1LQ4L180 1135 aa17.91■□□□□ 0.46
PABPC4-202ENST00000372857 NUP88Q99567 741 aaPredicted RBP17.91■□□□□ 0.46
PABPC4-202ENST00000372857 TFR2Q9UP52 801 aa17.91■□□□□ 0.46
PABPC4-202ENST00000372857 WDR19Q8NEZ3 1342 aa17.91■□□□□ 0.46
PABPC4-202ENST00000372857 A0A087X0B3 334 aa17.9■□□□□ 0.46
PABPC4-202ENST00000372857 LOC102724159A0A0B4J2E5 919 aa17.9■□□□□ 0.46
PABPC4-202ENST00000372857 SRGAP2O75044 1071 aa17.9■□□□□ 0.46
PABPC4-202ENST00000372857 PWP2Q15269 919 aaKnown RBP17.9■□□□□ 0.46
PABPC4-202ENST00000372857 SAFBQ15424 915 aaKnown RBP eCLIP17.9■□□□□ 0.46
PABPC4-202ENST00000372857 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.9■□□□□ 0.46
PABPC4-202ENST00000372857 ELOA2Q8IYF1 753 aaPredicted RBP17.9■□□□□ 0.46
PABPC4-202ENST00000372857 CNPY4Q8N129 248 aa17.9■□□□□ 0.46
PABPC4-202ENST00000372857 CAPZA3Q96KX2 299 aa17.9■□□□□ 0.46
PABPC4-202ENST00000372857 VPS16Q9H269 839 aa17.9■□□□□ 0.46
PABPC4-202ENST00000372857 AMPD2Q01433 879 aa17.9■□□□□ 0.46
PABPC4-202ENST00000372857 DNAJC21Q5F1R6 531 aaKnown RBP17.9■□□□□ 0.46
PABPC4-202ENST00000372857 SAMD1Q6SPF0 538 aaPredicted RBP17.9■□□□□ 0.46
PABPC4-202ENST00000372857 EPSTI1Q96J88 318 aa17.9■□□□□ 0.46
PABPC4-202ENST00000372857 GEMIN8Q9NWZ8 242 aaKnown RBP17.9■□□□□ 0.46
PABPC4-202ENST00000372857 HPCAL4Q9UM19 191 aa17.9■□□□□ 0.46
PABPC4-202ENST00000372857 DDX60Q8IY21 1712 aaKnown RBP17.9■□□□□ 0.46
PABPC4-202ENST00000372857 SNAP23O00161 211 aa17.9■□□□□ 0.46
PABPC4-202ENST00000372857 PRPF6O94906 941 aaKnown RBP17.9■□□□□ 0.46
PABPC4-202ENST00000372857 MMP1P03956 469 aa17.9■□□□□ 0.46
PABPC4-202ENST00000372857 TUBB4BP68371 445 aa17.9■□□□□ 0.46
PABPC4-202ENST00000372857 TICAM2Q86XR7 235 aa17.9■□□□□ 0.46
PABPC4-202ENST00000372857 IGDCC4Q8TDY8 1250 aa17.9■□□□□ 0.46
PABPC4-202ENST00000372857 SMARCC1Q92922 1105 aaPredicted RBP17.9■□□□□ 0.46
PABPC4-202ENST00000372857 LY9Q9HBG7 655 aa17.9■□□□□ 0.46
PABPC4-202ENST00000372857 MYCNP04198 464 aaPredicted RBP17.89■□□□□ 0.45
PABPC4-202ENST00000372857 CUL4BQ13620 913 aa17.89■□□□□ 0.45
PABPC4-202ENST00000372857 WDR93Q6P2C0 686 aa17.89■□□□□ 0.45
PABPC4-202ENST00000372857 OXER1Q8TDS5 423 aa17.89■□□□□ 0.45
PABPC4-202ENST00000372857 ABHD10Q9NUJ1 306 aa17.89■□□□□ 0.45
PABPC4-202ENST00000372857 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.89■□□□□ 0.453e-7■□□□□ 10.5
PABPC4-202ENST00000372857 CTNND2Q9UQB3 1225 aa17.89■□□□□ 0.45
PABPC4-202ENST00000372857 N4BP3O15049 544 aa17.89■□□□□ 0.45
PABPC4-202ENST00000372857 CDKAL1Q5VV42 579 aa17.89■□□□□ 0.45
PABPC4-202ENST00000372857 CHP1Q99653 195 aa17.89■□□□□ 0.45
PABPC4-202ENST00000372857 DEF6Q9H4E7 631 aa17.89■□□□□ 0.45
PABPC4-202ENST00000372857 SLC12A7Q9Y666 1083 aa17.89■□□□□ 0.45
PABPC4-202ENST00000372857 DPYDQ12882 1025 aa17.88■□□□□ 0.45
PABPC4-202ENST00000372857 TADA2BQ86TJ2 420 aa17.88■□□□□ 0.45
PABPC4-202ENST00000372857 TMTC1Q8IUR5 882 aa17.88■□□□□ 0.45
PABPC4-202ENST00000372857 EFCAB13Q8IY85 973 aa17.88■□□□□ 0.45
PABPC4-202ENST00000372857 SPATA20Q8TB22 786 aa17.88■□□□□ 0.45
PABPC4-202ENST00000372857 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.88■□□□□ 0.45
PABPC4-202ENST00000372857 MMS19Q96T76 1030 aa17.88■□□□□ 0.45
PABPC4-202ENST00000372857 GGCXP38435 758 aa17.88■□□□□ 0.45
PABPC4-202ENST00000372857 CCDC57Q2TAC2 916 aa17.88■□□□□ 0.45
PABPC4-202ENST00000372857 GPATCH11Q8N954 259 aa17.88■□□□□ 0.45
PABPC4-202ENST00000372857 HELBQ8NG08 1087 aaPredicted RBP17.88■□□□□ 0.45
PABPC4-202ENST00000372857 CABP5Q9NP86 173 aa17.88■□□□□ 0.45
PABPC4-202ENST00000372857 TNS3Q68CZ2 1445 aa17.88■□□□□ 0.45
PABPC4-202ENST00000372857 TRPM3Q9HCF6 1732 aaPredicted RBP17.88■□□□□ 0.45
PABPC4-202ENST00000372857 FAM205CA6NFA0 338 aa17.88■□□□□ 0.45
PABPC4-202ENST00000372857 IFIT3O14879 490 aaKnown RBP17.88■□□□□ 0.45
PABPC4-202ENST00000372857 IL2RBP14784 551 aa17.88■□□□□ 0.45
PABPC4-202ENST00000372857 CCT5P48643 541 aa17.88■□□□□ 0.45
PABPC4-202ENST00000372857 LIG3P49916 1009 aa17.88■□□□□ 0.45
PABPC4-202ENST00000372857 USP14P54578 494 aa17.88■□□□□ 0.45
PABPC4-202ENST00000372857 STIM1Q13586 685 aa17.88■□□□□ 0.45
PABPC4-202ENST00000372857 KANK3Q6NY19 840 aa17.88■□□□□ 0.45
PABPC4-202ENST00000372857 CTAGE1Q96RT6 745 aa17.88■□□□□ 0.45
PABPC4-202ENST00000372857 ZKSCAN3Q9BRR0 538 aa17.88■□□□□ 0.45
PABPC4-202ENST00000372857 EHD4Q9H223 541 aa17.88■□□□□ 0.45
PABPC4-202ENST00000372857 BRMS1Q9HCU9 246 aa17.88■□□□□ 0.45
PABPC4-202ENST00000372857 TAB2Q9NYJ8 693 aa17.88■□□□□ 0.45
PABPC4-202ENST00000372857 IDH1O75874 414 aaKnown RBP17.87■□□□□ 0.45
PABPC4-202ENST00000372857 RILPL1Q5EBL4 403 aa17.87■□□□□ 0.45
PABPC4-202ENST00000372857 CYP26C1Q6V0L0 522 aa17.87■□□□□ 0.45
PABPC4-202ENST00000372857 SRPRBQ9Y5M8 271 aaKnown RBP17.87■□□□□ 0.45
PABPC4-202ENST00000372857 FMNL1O95466 1100 aaPredicted RBP17.87■□□□□ 0.45
PABPC4-202ENST00000372857 KRT9P35527 623 aa17.87■□□□□ 0.45
PABPC4-202ENST00000372857 AARSP49588 968 aaKnown RBP eCLIP17.87■□□□□ 0.45
PABPC4-202ENST00000372857 CTDSPL2Q05D32 466 aa17.87■□□□□ 0.45
PABPC4-202ENST00000372857 KRT31Q15323 416 aa17.87■□□□□ 0.45
PABPC4-202ENST00000372857 HLFQ16534 295 aa17.87■□□□□ 0.45
PABPC4-202ENST00000372857 CDHR2Q9BYE9 1310 aa17.87■□□□□ 0.45
PABPC4-202ENST00000372857 ZNF335Q9H4Z2 1342 aaPredicted RBP17.87■□□□□ 0.45
PABPC4-202ENST00000372857 ATP1A1P05023 1023 aaKnown RBP17.86■□□□□ 0.45
PABPC4-202ENST00000372857 TUBBP07437 444 aa17.86■□□□□ 0.45
PABPC4-202ENST00000372857 CTCFLQ8NI51 663 aaPredicted RBP17.86■□□□□ 0.45
PABPC4-202ENST00000372857 PAGE5Q96GU1 130 aa17.86■□□□□ 0.45
PABPC4-202ENST00000372857 TMOD3Q9NYL9 352 aa17.86■□□□□ 0.45
PABPC4-202ENST00000372857 SPEF2Q9C093 1822 aa17.86■□□□□ 0.45
PABPC4-202ENST00000372857 MAP3K15Q6ZN16 1313 aa17.86■□□□□ 0.45
PABPC4-202ENST00000372857 WDR17Q8IZU2 1322 aa17.86■□□□□ 0.45
PABPC4-202ENST00000372857 PCDH11XQ9BZA7 1347 aa17.86■□□□□ 0.45
PABPC4-202ENST00000372857 PCDH11YQ9BZA8 1340 aa17.86■□□□□ 0.45
PABPC4-202ENST00000372857 PPP1R3GB7ZBB8 358 aa17.86■□□□□ 0.45
PABPC4-202ENST00000372857 CIAO1O76071 339 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms