RNA–Protein interactions for RNA: ENST00000372422.6

YIPF3-202, Transcript of Yip1 domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIPF3, Length 1,576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-202ENST00000372422 PPP1R12BO60237 982 aaPredicted RBP17.57■□□□□ 0.4
YIPF3-202ENST00000372422 TTLL1O95922 423 aa17.57■□□□□ 0.4
YIPF3-202ENST00000372422 CAP2P40123 477 aa17.57■□□□□ 0.4
YIPF3-202ENST00000372422 RCAN1P53805 252 aa17.57■□□□□ 0.4
YIPF3-202ENST00000372422 MTMR4Q9NYA4 1195 aa17.57■□□□□ 0.4
YIPF3-202ENST00000372422 IGKV6D-41A0A0C4DH26 115 aa17.57■□□□□ 0.4
YIPF3-202ENST00000372422 ZBTB43O43298 467 aa17.57■□□□□ 0.4
YIPF3-202ENST00000372422 CTNND1O60716 968 aaKnown RBP17.57■□□□□ 0.4
YIPF3-202ENST00000372422 GH2P01242 217 aa17.57■□□□□ 0.4
YIPF3-202ENST00000372422 ASNSP08243 561 aa17.57■□□□□ 0.4
YIPF3-202ENST00000372422 CALM1P0DP23 149 aa17.57■□□□□ 0.4
YIPF3-202ENST00000372422 CALM2P0DP24 149 aa17.57■□□□□ 0.4
YIPF3-202ENST00000372422 CALM3P0DP25 149 aa17.57■□□□□ 0.4
YIPF3-202ENST00000372422 TOP1P11387 765 aaKnown RBP17.57■□□□□ 0.4
YIPF3-202ENST00000372422 ME3Q16798 604 aa17.57■□□□□ 0.4
YIPF3-202ENST00000372422 APOA5Q6Q788 366 aa17.57■□□□□ 0.4
YIPF3-202ENST00000372422 CDCA5Q96FF9 252 aa17.57■□□□□ 0.4
YIPF3-202ENST00000372422 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.57■□□□□ 0.4
YIPF3-202ENST00000372422 PHF20L1A8MW92 1017 aa17.56■□□□□ 0.4
YIPF3-202ENST00000372422 DHX16O60231 1041 aaKnown RBP17.56■□□□□ 0.4
YIPF3-202ENST00000372422 DDAH1O94760 285 aa17.56■□□□□ 0.4
YIPF3-202ENST00000372422 PDIA3P30101 505 aaKnown RBP17.56■□□□□ 0.4
YIPF3-202ENST00000372422 NOVP48745 357 aa17.56■□□□□ 0.4
YIPF3-202ENST00000372422 ICA1Q05084 483 aa17.56■□□□□ 0.4
YIPF3-202ENST00000372422 RAB3GAP1Q15042 981 aa17.56■□□□□ 0.4
YIPF3-202ENST00000372422 RCSD1Q6JBY9 416 aa17.56■□□□□ 0.4
YIPF3-202ENST00000372422 ZNF654Q8IZM8 581 aa17.56■□□□□ 0.4
YIPF3-202ENST00000372422 GLIS2Q9BZE0 524 aaPredicted RBP17.56■□□□□ 0.4
YIPF3-202ENST00000372422 GPBP1L1Q9HC44 474 aaPredicted RBP17.56■□□□□ 0.4
YIPF3-202ENST00000372422 BRPF3Q9ULD4 1205 aa17.56■□□□□ 0.4
YIPF3-202ENST00000372422 ZBTB21Q9ULJ3 1066 aa17.56■□□□□ 0.4
YIPF3-202ENST00000372422 PFKFB2O60825 505 aa17.55■□□□□ 0.4
YIPF3-202ENST00000372422 POTEIP0CG38 1075 aa17.55■□□□□ 0.4
YIPF3-202ENST00000372422 POTEJP0CG39 1038 aa17.55■□□□□ 0.4
YIPF3-202ENST00000372422 METAP2P50579 478 aaKnown RBP eCLIP17.55■□□□□ 0.4
YIPF3-202ENST00000372422 STK3Q13188 491 aa17.55■□□□□ 0.4
YIPF3-202ENST00000372422 SEPT2Q15019 361 aa17.55■□□□□ 0.4
YIPF3-202ENST00000372422 NFKBIBQ15653 356 aa17.55■□□□□ 0.4
YIPF3-202ENST00000372422 MAP1SQ66K74 1059 aaPredicted RBP17.55■□□□□ 0.4
YIPF3-202ENST00000372422 MICU3Q86XE3 530 aa17.55■□□□□ 0.4
YIPF3-202ENST00000372422 WRNIP1Q96S55 665 aa17.55■□□□□ 0.4
YIPF3-202ENST00000372422 SENP2Q9HC62 589 aa17.55■□□□□ 0.4
YIPF3-202ENST00000372422 NYAP2Q9P242 653 aa17.55■□□□□ 0.4
YIPF3-202ENST00000372422 ZNF112Q9UJU3 913 aa17.55■□□□□ 0.4
YIPF3-202ENST00000372422 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.55■□□□□ 0.4
YIPF3-202ENST00000372422 POLR2AP24928 1970 aaKnown RBP17.55■□□□□ 0.4
YIPF3-202ENST00000372422 CCDC196A0A1B0GTZ2 297 aa17.54■□□□□ 0.4
YIPF3-202ENST00000372422 IREB2P48200 963 aaKnown RBP17.54■□□□□ 0.4
YIPF3-202ENST00000372422 ATP2B2Q01814 1243 aa17.54■□□□□ 0.4
YIPF3-202ENST00000372422 CUL4AQ13619 759 aa17.54■□□□□ 0.4
YIPF3-202ENST00000372422 PPP2R5BQ15173 497 aa17.54■□□□□ 0.4
YIPF3-202ENST00000372422 PNMA1Q8ND90 353 aa17.54■□□□□ 0.4
YIPF3-202ENST00000372422 NUP133Q8WUM0 1156 aa17.54■□□□□ 0.4
YIPF3-202ENST00000372422 GTF3C6Q969F1 213 aa17.54■□□□□ 0.4
YIPF3-202ENST00000372422 TMEM47Q9BQJ4 181 aa17.54■□□□□ 0.4
YIPF3-202ENST00000372422 ARHGEF10LQ9HCE6 1279 aa17.54■□□□□ 0.4
YIPF3-202ENST00000372422 CLIP2Q9UDT6 1046 aa17.54■□□□□ 0.4
YIPF3-202ENST00000372422 SSC5DA1L4H1 1573 aa17.54■□□□□ 0.4
YIPF3-202ENST00000372422 GOLGA8AA7E2F4 631 aa17.53■□□□□ 0.4
YIPF3-202ENST00000372422 LARGE1O95461 756 aa17.53■□□□□ 0.4
YIPF3-202ENST00000372422 RRP1BQ14684 758 aaKnown RBP17.53■□□□□ 0.4
YIPF3-202ENST00000372422 CPLX2Q6PUV4 134 aaKnown RBP17.53■□□□□ 0.4
YIPF3-202ENST00000372422 KLRG1Q96E93 195 aa17.53■□□□□ 0.4
YIPF3-202ENST00000372422 INTS4Q96HW7 963 aaKnown RBP17.53■□□□□ 0.4
YIPF3-202ENST00000372422 SH2D4AQ9H788 454 aa17.53■□□□□ 0.4
YIPF3-202ENST00000372422 PICK1Q9NRD5 415 aa17.53■□□□□ 0.4
YIPF3-202ENST00000372422 SYNPO2Q9UMS6 1093 aa17.53■□□□□ 0.4
YIPF3-202ENST00000372422 GREB1LQ9C091 1923 aaPredicted RBP17.53■□□□□ 0.4
YIPF3-202ENST00000372422 EEF2P13639 858 aaKnown RBP17.53■□□□□ 0.4
YIPF3-202ENST00000372422 SCRN1Q12765 414 aa17.53■□□□□ 0.4
YIPF3-202ENST00000372422 TTLL12Q14166 644 aaPredicted RBP17.53■□□□□ 0.4
YIPF3-202ENST00000372422 CCDC83Q8IWF9 413 aa17.53■□□□□ 0.4
YIPF3-202ENST00000372422 SCYL3Q8IZE3 742 aa17.53■□□□□ 0.4
YIPF3-202ENST00000372422 NECAB1Q8N987 351 aa17.53■□□□□ 0.4
YIPF3-202ENST00000372422 CTCFLQ8NI51 663 aaPredicted RBP17.53■□□□□ 0.4
YIPF3-202ENST00000372422 CPLX1O14810 134 aa17.52■□□□□ 0.39
YIPF3-202ENST00000372422 INPP5BP32019 993 aa17.52■□□□□ 0.39
YIPF3-202ENST00000372422 KIF5BP33176 963 aa17.52■□□□□ 0.39
YIPF3-202ENST00000372422 GUCY1A2P33402 732 aa17.52■□□□□ 0.39
YIPF3-202ENST00000372422 CCT2P78371 535 aaKnown RBP17.52■□□□□ 0.39
YIPF3-202ENST00000372422 PRKG1Q13976 671 aa17.52■□□□□ 0.39
YIPF3-202ENST00000372422 RTN1Q16799 776 aa17.52■□□□□ 0.39
YIPF3-202ENST00000372422 CHADLQ6NUI6 762 aa17.52■□□□□ 0.39
YIPF3-202ENST00000372422 ARMC9Q7Z3E5 817 aa17.52■□□□□ 0.39
YIPF3-202ENST00000372422 MKL1Q969V6 931 aa17.52■□□□□ 0.39
YIPF3-202ENST00000372422 MAP3K14Q99558 947 aa17.52■□□□□ 0.39
YIPF3-202ENST00000372422 MYL10Q9BUA6 226 aa17.52■□□□□ 0.39
YIPF3-202ENST00000372422 RBM28Q9NW13 759 aaKnown RBP17.52■□□□□ 0.39
YIPF3-202ENST00000372422 HPS5Q9UPZ3 1129 aa17.52■□□□□ 0.39
YIPF3-202ENST00000372422 NID2Q14112 1375 aa17.51■□□□□ 0.39
YIPF3-202ENST00000372422 USP2O75604 605 aaPredicted RBP17.51■□□□□ 0.39
YIPF3-202ENST00000372422 CDKL5O76039 1030 aa17.51■□□□□ 0.39
YIPF3-202ENST00000372422 MAP3K9P80192 1104 aa17.51■□□□□ 0.39
YIPF3-202ENST00000372422 TROAPQ12815 778 aa17.51■□□□□ 0.39
YIPF3-202ENST00000372422 SHROOM1Q2M3G4 852 aaPredicted RBP17.51■□□□□ 0.39
YIPF3-202ENST00000372422 NOL9Q5SY16 702 aaKnown RBP17.51■□□□□ 0.39
YIPF3-202ENST00000372422 CLEC10AQ8IUN9 316 aa17.51■□□□□ 0.39
YIPF3-202ENST00000372422 FANCBQ8NB91 859 aa17.51■□□□□ 0.39
YIPF3-202ENST00000372422 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.51■□□□□ 0.39
YIPF3-202ENST00000372422 LLPHQ9BRT6 129 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms