RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 RIN2Q8WYP3 895 aaPredicted RBP20.65■□□□□ 0.9
MMP9-201ENST00000372330 PCDHA5Q9Y5H7 936 aa20.65■□□□□ 0.9
MMP9-201ENST00000372330 UBR2Q8IWV8 1755 aa20.65■□□□□ 0.9
MMP9-201ENST00000372330 MROH7-TTC4A0A0A0MT08 1334 aa20.65■□□□□ 0.9
MMP9-201ENST00000372330 CNGA4Q8IV77 575 aa20.65■□□□□ 0.9
MMP9-201ENST00000372330 GPR108Q9NPR9 543 aa20.65■□□□□ 0.9
MMP9-201ENST00000372330 OPA1O60313 960 aa20.64■□□□□ 0.89
MMP9-201ENST00000372330 SKOR1P84550 965 aa20.64■□□□□ 0.89
MMP9-201ENST00000372330 CCDC129Q6ZRS4 1044 aa20.64■□□□□ 0.89
MMP9-201ENST00000372330 STOX1Q6ZVD7 989 aa20.64■□□□□ 0.89
MMP9-201ENST00000372330 TMTC1Q8IUR5 882 aa20.64■□□□□ 0.89
MMP9-201ENST00000372330 KLC4Q9NSK0 619 aa20.64■□□□□ 0.89
MMP9-201ENST00000372330 KCPQ6ZWJ8 1503 aa20.64■□□□□ 0.89
MMP9-201ENST00000372330 NHSL1Q5SYE7 1610 aa20.64■□□□□ 0.89
MMP9-201ENST00000372330 MYO1FO00160 1098 aa20.64■□□□□ 0.89
MMP9-201ENST00000372330 ZEB2O60315 1214 aa20.64■□□□□ 0.89
MMP9-201ENST00000372330 METTL16Q86W50 562 aaKnown RBP20.64■□□□□ 0.89
MMP9-201ENST00000372330 CDC5LQ99459 802 aaKnown RBP20.64■□□□□ 0.89
MMP9-201ENST00000372330 CCDC9Q9Y3X0 531 aaKnown RBP20.64■□□□□ 0.89
MMP9-201ENST00000372330 SH3TC1Q8TE82 1336 aa20.63■□□□□ 0.89
MMP9-201ENST00000372330 NDUFAB1O14561 156 aa20.63■□□□□ 0.89
MMP9-201ENST00000372330 IL15P40933 162 aaPredicted RBP20.63■□□□□ 0.89
MMP9-201ENST00000372330 PDE4BQ07343 736 aa20.63■□□□□ 0.89
MMP9-201ENST00000372330 RESP18Q5W5W9 173 aa20.63■□□□□ 0.89
MMP9-201ENST00000372330 IQCA1Q86XH1 822 aa20.63■□□□□ 0.89
MMP9-201ENST00000372330 CCDC50Q8IVM0 306 aa20.63■□□□□ 0.89
MMP9-201ENST00000372330 NEUROD6Q96NK8 337 aa20.63■□□□□ 0.89
MMP9-201ENST00000372330 NUP188Q5SRE5 1749 aa20.63■□□□□ 0.89
MMP9-201ENST00000372330 PALLDQ8WX93 1383 aa20.62■□□□□ 0.89
MMP9-201ENST00000372330 IL2RBP14784 551 aa20.62■□□□□ 0.89
MMP9-201ENST00000372330 RBL2Q08999 1139 aa20.62■□□□□ 0.89
MMP9-201ENST00000372330 GRIPAP1Q4V328 841 aa20.62■□□□□ 0.89
MMP9-201ENST00000372330 CCNI2Q6ZMN8 369 aaPredicted RBP20.62■□□□□ 0.89
MMP9-201ENST00000372330 TRAPPC11Q7Z392 1133 aa20.62■□□□□ 0.89
MMP9-201ENST00000372330 SELENOOQ9BVL4 669 aa20.62■□□□□ 0.89
MMP9-201ENST00000372330 ZBTB3Q9H5J0 574 aa20.62■□□□□ 0.89
MMP9-201ENST00000372330 A0A1B0GUA9 196 aa20.62■□□□□ 0.89
MMP9-201ENST00000372330 CKAP4Q07065 602 aaKnown RBP20.62■□□□□ 0.89
MMP9-201ENST00000372330 NCAPH2Q6IBW4 605 aa20.62■□□□□ 0.89
MMP9-201ENST00000372330 SHC4Q6S5L8 630 aa20.62■□□□□ 0.89
MMP9-201ENST00000372330 FOXP4Q8IVH2 680 aaPredicted RBP20.62■□□□□ 0.89
MMP9-201ENST00000372330 TRIML1Q8N9V2 468 aa20.62■□□□□ 0.89
MMP9-201ENST00000372330 SGSM3Q96HU1 749 aa20.62■□□□□ 0.89
MMP9-201ENST00000372330 CD248Q9HCU0 757 aa20.62■□□□□ 0.89
MMP9-201ENST00000372330 GGA2Q9UJY4 613 aa20.62■□□□□ 0.89
MMP9-201ENST00000372330 MFAP3LO75121 409 aa20.61■□□□□ 0.89
MMP9-201ENST00000372330 EPB41P11171 864 aaKnown RBP20.61■□□□□ 0.89
MMP9-201ENST00000372330 BMP6P22004 513 aa20.61■□□□□ 0.89
MMP9-201ENST00000372330 EVA1CP58658 441 aa20.61■□□□□ 0.89
MMP9-201ENST00000372330 MAGEC3Q8TD91 643 aa20.61■□□□□ 0.89
MMP9-201ENST00000372330 TEX13AQ9BXU3 409 aaPredicted RBP20.61■□□□□ 0.89
MMP9-201ENST00000372330 PAG1Q9NWQ8 432 aa20.61■□□□□ 0.89
MMP9-201ENST00000372330 WWC3Q9ULE0 1092 aa20.61■□□□□ 0.89
MMP9-201ENST00000372330 TIMM10P62072 90 aa20.61■□□□□ 0.89
MMP9-201ENST00000372330 DRP2Q13474 957 aa20.61■□□□□ 0.89
MMP9-201ENST00000372330 NT5DC1Q5TFE4 455 aa20.61■□□□□ 0.89
MMP9-201ENST00000372330 TICAM2Q86XR7 235 aa20.61■□□□□ 0.89
MMP9-201ENST00000372330 CTAGE1Q96RT6 745 aa20.61■□□□□ 0.89
MMP9-201ENST00000372330 TRIM6Q9C030 488 aaPredicted RBP20.61■□□□□ 0.89
MMP9-201ENST00000372330 TJP1Q07157 1748 aa20.61■□□□□ 0.89
MMP9-201ENST00000372330 MAP3K15Q6ZN16 1313 aa20.61■□□□□ 0.89
MMP9-201ENST00000372330 A0A0U1RQJ8 604 aa20.6■□□□□ 0.89
MMP9-201ENST00000372330 EYA2O00167 538 aa20.6■□□□□ 0.89
MMP9-201ENST00000372330 NEBLO76041 1014 aa20.6■□□□□ 0.89
MMP9-201ENST00000372330 TFRCP02786 760 aaKnown RBP20.6■□□□□ 0.89
MMP9-201ENST00000372330 ERCC5P28715 1186 aaPredicted RBP20.6■□□□□ 0.89
MMP9-201ENST00000372330 MARCKSP29966 332 aaPredicted RBP20.6■□□□□ 0.89
MMP9-201ENST00000372330 CDC27P30260 824 aa20.6■□□□□ 0.89
MMP9-201ENST00000372330 CDR1P51861 262 aa20.6■□□□□ 0.89
MMP9-201ENST00000372330 KIF23Q02241 960 aaPredicted RBP20.6■□□□□ 0.89
MMP9-201ENST00000372330 ATRIPQ8WXE1 791 aa20.6■□□□□ 0.89
MMP9-201ENST00000372330 RUBCNQ92622 972 aa20.6■□□□□ 0.89
MMP9-201ENST00000372330 FAM184BQ9ULE4 1060 aa20.6■□□□□ 0.89
MMP9-201ENST00000372330 RASSF9O75901 435 aa20.6■□□□□ 0.89
MMP9-201ENST00000372330 HSP90AA4PQ58FG1 418 aa20.6■□□□□ 0.89
MMP9-201ENST00000372330 CEP85LQ5SZL2 805 aa20.6■□□□□ 0.89
MMP9-201ENST00000372330 ANKRD18AQ8IVF6 992 aa20.6■□□□□ 0.89
MMP9-201ENST00000372330 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.6■□□□□ 0.89
MMP9-201ENST00000372330 HELLSQ9NRZ9 838 aa20.6■□□□□ 0.89
MMP9-201ENST00000372330 SAMM50Q9Y512 469 aa20.6■□□□□ 0.89
MMP9-201ENST00000372330 PAPPAQ13219 1627 aa20.6■□□□□ 0.89
MMP9-201ENST00000372330 SHANK3Q9BYB0 1731 aa20.59■□□□□ 0.89
MMP9-201ENST00000372330 TNS2Q63HR2 1409 aa20.59■□□□□ 0.89
MMP9-201ENST00000372330 PSMD14O00487 310 aa20.59■□□□□ 0.89
MMP9-201ENST00000372330 LONRF3Q496Y0 759 aa20.59■□□□□ 0.89
MMP9-201ENST00000372330 LRRC24Q50LG9 513 aa20.59■□□□□ 0.89
MMP9-201ENST00000372330 OTUD7BQ6GQQ9 843 aa20.59■□□□□ 0.89
MMP9-201ENST00000372330 RNF217Q8TC41 542 aa20.59■□□□□ 0.89
MMP9-201ENST00000372330 DSCC1Q9BVC3 393 aa20.59■□□□□ 0.89
MMP9-201ENST00000372330 VCPKMTQ9H867 229 aa20.59■□□□□ 0.89
MMP9-201ENST00000372330 KCNH3Q9ULD8 1083 aa20.59■□□□□ 0.89
MMP9-201ENST00000372330 PBX1P40424 430 aa20.59■□□□□ 0.89
MMP9-201ENST00000372330 MDM2Q00987 491 aaPredicted RBP20.59■□□□□ 0.89
MMP9-201ENST00000372330 ZKSCAN8Q15776 578 aaPredicted RBP20.59■□□□□ 0.89
MMP9-201ENST00000372330 CCDC40Q4G0X9 1142 aa20.59■□□□□ 0.89
MMP9-201ENST00000372330 CCDC70Q6NSX1 233 aa20.59■□□□□ 0.89
MMP9-201ENST00000372330 CIAO1O76071 339 aa20.58■□□□□ 0.89
MMP9-201ENST00000372330 FMR1Q06787 632 aaKnown RBP eCLIP20.58■□□□□ 0.89
MMP9-201ENST00000372330 ACTN3Q08043 901 aaPredicted RBP20.58■□□□□ 0.89
MMP9-201ENST00000372330 EHD4Q9H223 541 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms