RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 JAG1P78504 1218 aa18.6■□□□□ 0.57
TMEM53-204ENST00000372243 WRNIP1Q96S55 665 aa18.6■□□□□ 0.57
TMEM53-204ENST00000372243 DOCK1Q14185 1865 aa18.6■□□□□ 0.57
TMEM53-204ENST00000372243 UNCXA6NJT0 531 aa18.59■□□□□ 0.57
TMEM53-204ENST00000372243 TRAF5O00463 557 aa18.59■□□□□ 0.57
TMEM53-204ENST00000372243 CD2BP2O95400 341 aaKnown RBP18.59■□□□□ 0.57
TMEM53-204ENST00000372243 IREB2P48200 963 aaKnown RBP18.59■□□□□ 0.57
TMEM53-204ENST00000372243 FKBP1BP68106 108 aa18.59■□□□□ 0.57
TMEM53-204ENST00000372243 NOL9Q5SY16 702 aaKnown RBP18.59■□□□□ 0.57
TMEM53-204ENST00000372243 IFIT1BQ5T764 474 aaKnown RBP18.59■□□□□ 0.57
TMEM53-204ENST00000372243 SCYL3Q8IZE3 742 aa18.59■□□□□ 0.57
TMEM53-204ENST00000372243 NYAP2Q9P242 653 aa18.59■□□□□ 0.57
TMEM53-204ENST00000372243 TTLL1O95922 423 aa18.59■□□□□ 0.57
TMEM53-204ENST00000372243 INPP5BP32019 993 aa18.59■□□□□ 0.57
TMEM53-204ENST00000372243 SEPT2Q15019 361 aa18.59■□□□□ 0.57
TMEM53-204ENST00000372243 GPHNQ9NQX3 736 aaPredicted RBP18.59■□□□□ 0.57
TMEM53-204ENST00000372243 STX8Q9UNK0 236 aa18.59■□□□□ 0.57
TMEM53-204ENST00000372243 LIMCH1Q9UPQ0 1083 aa18.59■□□□□ 0.57
TMEM53-204ENST00000372243 CCDC69A6NI79 296 aa18.58■□□□□ 0.56
TMEM53-204ENST00000372243 RCAN1P53805 252 aa18.58■□□□□ 0.56
TMEM53-204ENST00000372243 MAP3K9P80192 1104 aa18.58■□□□□ 0.56
TMEM53-204ENST00000372243 SHROOM1Q2M3G4 852 aaPredicted RBP18.58■□□□□ 0.56
TMEM53-204ENST00000372243 ARMC9Q7Z3E5 817 aa18.58■□□□□ 0.56
TMEM53-204ENST00000372243 SMC1BQ8NDV3 1235 aa18.58■□□□□ 0.56
TMEM53-204ENST00000372243 MKL1Q969V6 931 aa18.58■□□□□ 0.56
TMEM53-204ENST00000372243 ZNF274Q96GC6 653 aaPredicted RBP18.58■□□□□ 0.56
TMEM53-204ENST00000372243 ZSCAN31Q96LW9 406 aaPredicted RBP18.58■□□□□ 0.56
TMEM53-204ENST00000372243 SYNPO2Q9UMS6 1093 aa18.58■□□□□ 0.56
TMEM53-204ENST00000372243 FZD1Q9UP38 647 aa18.58■□□□□ 0.56
TMEM53-204ENST00000372243 TOMM70O94826 608 aa18.57■□□□□ 0.56
TMEM53-204ENST00000372243 TOP1P11387 765 aaKnown RBP18.57■□□□□ 0.56
TMEM53-204ENST00000372243 ICA1Q05084 483 aa18.57■□□□□ 0.56
TMEM53-204ENST00000372243 APOBRQ0VD83 1088 aa18.57■□□□□ 0.56
TMEM53-204ENST00000372243 PRKG1Q13976 671 aa18.57■□□□□ 0.56
TMEM53-204ENST00000372243 RAB3GAP1Q15042 981 aa18.57■□□□□ 0.56
TMEM53-204ENST00000372243 ANKRD13AQ8IZ07 590 aa18.57■□□□□ 0.56
TMEM53-204ENST00000372243 RBM46Q8TBY0 533 aaKnown RBP18.57■□□□□ 0.56
TMEM53-204ENST00000372243 ZKSCAN4Q969J2 545 aaPredicted RBP18.57■□□□□ 0.56
TMEM53-204ENST00000372243 SENP2Q9HC62 589 aa18.57■□□□□ 0.56
TMEM53-204ENST00000372243 OTOFQ9HC10 1997 aa18.57■□□□□ 0.56
TMEM53-204ENST00000372243 TRPM7Q96QT4 1865 aa18.57■□□□□ 0.56
TMEM53-204ENST00000372243 APOA5Q6Q788 366 aa18.56■□□□□ 0.56
TMEM53-204ENST00000372243 NFXL1Q6ZNB6 911 aa18.56■□□□□ 0.56
TMEM53-204ENST00000372243 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.56■□□□□ 0.56
TMEM53-204ENST00000372243 SIAH1Q8IUQ4 282 aa18.56■□□□□ 0.56
TMEM53-204ENST00000372243 HSCBQ8IWL3 235 aa18.56■□□□□ 0.56
TMEM53-204ENST00000372243 ZNF784Q8NCA9 323 aaPredicted RBP18.56■□□□□ 0.56
TMEM53-204ENST00000372243 TMEM47Q9BQJ4 181 aa18.56■□□□□ 0.56
TMEM53-204ENST00000372243 TBC1D2Q9BYX2 928 aa18.56■□□□□ 0.56
TMEM53-204ENST00000372243 KAT14Q9H8E8 782 aa18.56■□□□□ 0.56
TMEM53-204ENST00000372243 BRPF3Q9ULD4 1205 aa18.56■□□□□ 0.56
TMEM53-204ENST00000372243 TPCN1Q9ULQ1 816 aa18.56■□□□□ 0.56
TMEM53-204ENST00000372243 SLC12A7Q9Y666 1083 aa18.56■□□□□ 0.56
TMEM53-204ENST00000372243 MYH4Q9Y623 1939 aa18.56■□□□□ 0.56
TMEM53-204ENST00000372243 KLF18A0A0U1RQI7 1052 aa18.55■□□□□ 0.56
TMEM53-204ENST00000372243 USP17L5A8MUK1 530 aa18.55■□□□□ 0.56
TMEM53-204ENST00000372243 K7ELQ4 463 aaPredicted RBP18.55■□□□□ 0.56
TMEM53-204ENST00000372243 EEF2P13639 858 aaKnown RBP18.55■□□□□ 0.56
TMEM53-204ENST00000372243 FMR1Q06787 632 aaKnown RBP eCLIP18.55■□□□□ 0.56
TMEM53-204ENST00000372243 BECN1Q14457 450 aa18.55■□□□□ 0.56
TMEM53-204ENST00000372243 LDLRAD1Q5T700 205 aa18.55■□□□□ 0.56
TMEM53-204ENST00000372243 SYNE3Q6ZMZ3 975 aa18.55■□□□□ 0.56
TMEM53-204ENST00000372243 SH2B1Q9NRF2 756 aaPredicted RBP18.55■□□□□ 0.56
TMEM53-204ENST00000372243 CLIP2Q9UDT6 1046 aa18.55■□□□□ 0.56
TMEM53-204ENST00000372243 CSADQ9Y600 493 aa18.55■□□□□ 0.56
TMEM53-204ENST00000372243 PASKQ96RG2 1323 aa18.55■□□□□ 0.56
TMEM53-204ENST00000372243 DDAH1O94760 285 aa18.55■□□□□ 0.56
TMEM53-204ENST00000372243 CALM1P0DP23 149 aa18.55■□□□□ 0.56
TMEM53-204ENST00000372243 CALM2P0DP24 149 aa18.55■□□□□ 0.56
TMEM53-204ENST00000372243 CALM3P0DP25 149 aa18.55■□□□□ 0.56
TMEM53-204ENST00000372243 PDIA3P30101 505 aaKnown RBP18.55■□□□□ 0.56
TMEM53-204ENST00000372243 VGLL4Q14135 290 aa18.55■□□□□ 0.56
TMEM53-204ENST00000372243 TTLL12Q14166 644 aaPredicted RBP18.55■□□□□ 0.56
TMEM53-204ENST00000372243 CATIPQ7Z7H3 387 aa18.55■□□□□ 0.56
TMEM53-204ENST00000372243 ZNF654Q8IZM8 581 aa18.55■□□□□ 0.56
TMEM53-204ENST00000372243 PNMA1Q8ND90 353 aa18.55■□□□□ 0.56
TMEM53-204ENST00000372243 ZNF408Q9H9D4 720 aa18.55■□□□□ 0.56
TMEM53-204ENST00000372243 ARHGEF10LQ9HCE6 1279 aa18.55■□□□□ 0.56
TMEM53-204ENST00000372243 GBA2Q9HCG7 927 aaPredicted RBP18.55■□□□□ 0.56
TMEM53-204ENST00000372243 PICK1Q9NRD5 415 aa18.55■□□□□ 0.56
TMEM53-204ENST00000372243 NID2Q14112 1375 aa18.54■□□□□ 0.56
TMEM53-204ENST00000372243 CELF2O95319 508 aaKnown RBP18.54■□□□□ 0.56
TMEM53-204ENST00000372243 PTPRAP18433 802 aa18.54■□□□□ 0.56
TMEM53-204ENST00000372243 TROAPQ12815 778 aa18.54■□□□□ 0.56
TMEM53-204ENST00000372243 PPP2R5BQ15173 497 aa18.54■□□□□ 0.56
TMEM53-204ENST00000372243 ME3Q16798 604 aa18.54■□□□□ 0.56
TMEM53-204ENST00000372243 NOL8Q76FK4 1167 aaKnown RBP18.54■□□□□ 0.56
TMEM53-204ENST00000372243 CLEC10AQ8IUN9 316 aa18.54■□□□□ 0.56
TMEM53-204ENST00000372243 C2orf69Q8N8R5 385 aa18.54■□□□□ 0.56
TMEM53-204ENST00000372243 TMX3Q96JJ7 454 aa18.54■□□□□ 0.56
TMEM53-204ENST00000372243 MAP3K14Q99558 947 aa18.54■□□□□ 0.56
TMEM53-204ENST00000372243 LARP6Q9BRS8 491 aaKnown RBP18.54■□□□□ 0.56
TMEM53-204ENST00000372243 WDR18Q9BV38 432 aa18.54■□□□□ 0.56
TMEM53-204ENST00000372243 SH2D4AQ9H788 454 aa18.54■□□□□ 0.56
TMEM53-204ENST00000372243 AS3MTQ9HBK9 375 aa18.54■□□□□ 0.56
TMEM53-204ENST00000372243 TMX2Q9Y320 296 aa18.54■□□□□ 0.56
TMEM53-204ENST00000372243 SNCAIPQ9Y6H5 919 aa18.54■□□□□ 0.56
TMEM53-204ENST00000372243 ZBTB43O43298 467 aa18.53■□□□□ 0.56
TMEM53-204ENST00000372243 CHMP4CQ96CF2 233 aa18.53■□□□□ 0.56
TMEM53-204ENST00000372243 PHIPQ8WWQ0 1821 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms