RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 ADD1P35611 737 aaKnown RBP13.2□□□□□ -0.3
TSPAN1-201ENST00000372003 BTDP43251 543 aa13.2□□□□□ -0.3
TSPAN1-201ENST00000372003 FAM160A1Q05DH4 1040 aa13.2□□□□□ -0.3
TSPAN1-201ENST00000372003 CCAR1Q8IX12 1150 aaKnown RBP13.2□□□□□ -0.3
TSPAN1-201ENST00000372003 MTMR14Q8NCE2 650 aa13.2□□□□□ -0.3
TSPAN1-201ENST00000372003 ENGASEQ8NFI3 743 aa13.2□□□□□ -0.3
TSPAN1-201ENST00000372003 ZBED3Q96IU2 234 aaPredicted RBP13.2□□□□□ -0.3
TSPAN1-201ENST00000372003 NOL10Q9BSC4 688 aaKnown RBP13.2□□□□□ -0.3
TSPAN1-201ENST00000372003 VEZTQ9HBM0 779 aa13.2□□□□□ -0.3
TSPAN1-201ENST00000372003 USP40Q9NVE5 1235 aa13.2□□□□□ -0.3
TSPAN1-201ENST00000372003 AATFQ9NY61 560 aaKnown RBP eCLIP13.2□□□□□ -0.3
TSPAN1-201ENST00000372003 GGA3Q9NZ52 723 aa13.2□□□□□ -0.3
TSPAN1-201ENST00000372003 A0A1W2PQ27 194 aa13.19□□□□□ -0.3
TSPAN1-201ENST00000372003 A0A1W2PQ64 194 aa13.19□□□□□ -0.3
TSPAN1-201ENST00000372003 A0A1W2PQD8 194 aa13.19□□□□□ -0.3
TSPAN1-201ENST00000372003 KINO60870 393 aaKnown RBP13.19□□□□□ -0.3
TSPAN1-201ENST00000372003 ADD2P35612 726 aa13.19□□□□□ -0.3
TSPAN1-201ENST00000372003 CACNB3P54284 484 aa13.19□□□□□ -0.3
TSPAN1-201ENST00000372003 BMS1Q14692 1282 aaKnown RBP13.19□□□□□ -0.3
TSPAN1-201ENST00000372003 MAP1SQ66K74 1059 aaPredicted RBP13.19□□□□□ -0.3
TSPAN1-201ENST00000372003 DHX40Q8IX18 779 aaKnown RBP13.19□□□□□ -0.3
TSPAN1-201ENST00000372003 DCPSQ96C86 337 aaKnown RBP13.19□□□□□ -0.3
TSPAN1-201ENST00000372003 FAM163AQ96GL9 167 aaPredicted RBP13.19□□□□□ -0.3
TSPAN1-201ENST00000372003 AGXT2Q9BYV1 514 aa13.19□□□□□ -0.3
TSPAN1-201ENST00000372003 GAKO14976 1311 aa13.18□□□□□ -0.3
TSPAN1-201ENST00000372003 GPR75-ASB3A0A0A6YYF3 556 aa13.18□□□□□ -0.3
TSPAN1-201ENST00000372003 RNF113AO15541 343 aaKnown RBP13.18□□□□□ -0.3
TSPAN1-201ENST00000372003 DYNLL1P63167 89 aaKnown RBP13.18□□□□□ -0.3
TSPAN1-201ENST00000372003 SNW1Q13573 536 aaKnown RBP13.18□□□□□ -0.3
TSPAN1-201ENST00000372003 KMT5BQ4FZB7 885 aa13.18□□□□□ -0.3
TSPAN1-201ENST00000372003 CDC42EP5Q6NZY7 148 aa13.18□□□□□ -0.3
TSPAN1-201ENST00000372003 C11orf57Q6ZUT1 292 aaPredicted RBP13.18□□□□□ -0.3
TSPAN1-201ENST00000372003 LDHDQ86WU2 507 aa13.18□□□□□ -0.3
TSPAN1-201ENST00000372003 ZNF70Q9UC06 446 aaPredicted RBP13.18□□□□□ -0.3
TSPAN1-201ENST00000372003 ZNF215Q9UL58 517 aaPredicted RBP13.18□□□□□ -0.3
TSPAN1-201ENST00000372003 AKAP11Q9UKA4 1901 aa13.18□□□□□ -0.3
TSPAN1-201ENST00000372003 LAMA4Q16363 1823 aa13.18□□□□□ -0.3
TSPAN1-201ENST00000372003 TCRBV5S4A2TA0A5A2 114 aa13.17□□□□□ -0.3
TSPAN1-201ENST00000372003 TCP10L2B9ZVM9 353 aa13.17□□□□□ -0.3
TSPAN1-201ENST00000372003 BAG3O95817 575 aa13.17□□□□□ -0.3
TSPAN1-201ENST00000372003 TPM4P67936 248 aa13.17□□□□□ -0.3
TSPAN1-201ENST00000372003 LRRFIP1Q32MZ4 808 aaKnown RBP13.17□□□□□ -0.3
TSPAN1-201ENST00000372003 Q6ZUG5 572 aa13.17□□□□□ -0.3
TSPAN1-201ENST00000372003 FBXL16Q8N461 479 aa13.17□□□□□ -0.3
TSPAN1-201ENST00000372003 ZC3H15Q8WU90 426 aaKnown RBP13.17□□□□□ -0.3
TSPAN1-201ENST00000372003 ZNF646O15015 1829 aaPredicted RBP13.17□□□□□ -0.3
TSPAN1-201ENST00000372003 PSME4Q14997 1843 aa13.17□□□□□ -0.3
TSPAN1-201ENST00000372003 ATP8B1O43520 1251 aa13.17□□□□□ -0.3
TSPAN1-201ENST00000372003 JAK2O60674 1132 aa13.17□□□□□ -0.3
TSPAN1-201ENST00000372003 IGSF3O75054 1194 aa13.17□□□□□ -0.3
TSPAN1-201ENST00000372003 H2AFXP16104 143 aaPredicted RBP13.17□□□□□ -0.3
TSPAN1-201ENST00000372003 UBE3CQ15386 1083 aa13.17□□□□□ -0.3
TSPAN1-201ENST00000372003 SPDYE2Q495Y8 402 aa13.17□□□□□ -0.3
TSPAN1-201ENST00000372003 DLK2Q6UY11 383 aa13.17□□□□□ -0.3
TSPAN1-201ENST00000372003 DHX32Q7L7V1 743 aaKnown RBP13.17□□□□□ -0.3
TSPAN1-201ENST00000372003 SH3RF3Q8TEJ3 882 aaPredicted RBP13.17□□□□□ -0.3
TSPAN1-201ENST00000372003 ZNF592Q92610 1267 aa13.17□□□□□ -0.3
TSPAN1-201ENST00000372003 SRRTQ9BXP5 876 aaKnown RBP13.17□□□□□ -0.3
TSPAN1-201ENST00000372003 PUS7LQ9H0K6 701 aaKnown RBP13.17□□□□□ -0.3
TSPAN1-201ENST00000372003 TMOD2Q9NZR1 351 aa13.17□□□□□ -0.3
TSPAN1-201ENST00000372003 MYH13Q9UKX3 1938 aa13.16□□□□□ -0.3
TSPAN1-201ENST00000372003 MAGEB6P1A0A0J9YX57 407 aa13.16□□□□□ -0.3
TSPAN1-201ENST00000372003 TOMM70O94826 608 aa13.16□□□□□ -0.3
TSPAN1-201ENST00000372003 ZFYP08048 801 aaPredicted RBP13.16□□□□□ -0.3
TSPAN1-201ENST00000372003 TPM1P09493 284 aa13.16□□□□□ -0.3
TSPAN1-201ENST00000372003 SCRN1Q12765 414 aa13.16□□□□□ -0.3
TSPAN1-201ENST00000372003 MCMDC2Q4G0Z9 681 aa13.16□□□□□ -0.3
TSPAN1-201ENST00000372003 PRAMEF18Q5VWM3 479 aa13.16□□□□□ -0.3
TSPAN1-201ENST00000372003 ADALQ6DHV7 355 aa13.16□□□□□ -0.3
TSPAN1-201ENST00000372003 CHADLQ6NUI6 762 aa13.16□□□□□ -0.3
TSPAN1-201ENST00000372003 KRT26Q7Z3Y9 468 aa13.16□□□□□ -0.3
TSPAN1-201ENST00000372003 ZNF589Q86UQ0 364 aaPredicted RBP13.16□□□□□ -0.3
TSPAN1-201ENST00000372003 SULF1Q8IWU6 871 aa13.16□□□□□ -0.3
TSPAN1-201ENST00000372003 NSUN7Q8NE18 718 aaKnown RBP13.16□□□□□ -0.3
TSPAN1-201ENST00000372003 SEC62Q99442 399 aaKnown RBP13.16□□□□□ -0.3
TSPAN1-201ENST00000372003 GLIS2Q9BZE0 524 aaPredicted RBP13.16□□□□□ -0.3
TSPAN1-201ENST00000372003 PGAP2Q9UHJ9 254 aa13.16□□□□□ -0.3
TSPAN1-201ENST00000372003 USP27XA6NNY8 438 aa13.15□□□□□ -0.3
TSPAN1-201ENST00000372003 ADM5C9JUS6 153 aa13.15□□□□□ -0.3
TSPAN1-201ENST00000372003 RHBDL3P58872 404 aa13.15□□□□□ -0.3
TSPAN1-201ENST00000372003 PPP4CP60510 307 aa13.15□□□□□ -0.3
TSPAN1-201ENST00000372003 TCP10Q12799 353 aa13.15□□□□□ -0.3
TSPAN1-201ENST00000372003 NFIAQ12857 509 aa13.15□□□□□ -0.3
TSPAN1-201ENST00000372003 STK3Q13188 491 aa13.15□□□□□ -0.3
TSPAN1-201ENST00000372003 PICALMQ13492 652 aa13.15□□□□□ -0.3
TSPAN1-201ENST00000372003 FBXO38Q6PIJ6 1188 aa13.15□□□□□ -0.3
TSPAN1-201ENST00000372003 TEX11Q8IYF3 940 aa13.15□□□□□ -0.3
TSPAN1-201ENST00000372003 MRPS27Q92552 414 aaKnown RBP13.15□□□□□ -0.3
TSPAN1-201ENST00000372003 APPBP2Q92624 585 aa13.15□□□□□ -0.3
TSPAN1-201ENST00000372003 OSBP2Q969R2 916 aa13.15□□□□□ -0.3
TSPAN1-201ENST00000372003 AIDAQ96BJ3 306 aa13.15□□□□□ -0.3
TSPAN1-201ENST00000372003 ZNF274Q96GC6 653 aaPredicted RBP13.15□□□□□ -0.3
TSPAN1-201ENST00000372003 DSCC1Q9BVC3 393 aa13.15□□□□□ -0.3
TSPAN1-201ENST00000372003 ARMT1Q9H993 441 aa13.15□□□□□ -0.3
TSPAN1-201ENST00000372003 RTEL1Q9NZ71 1219 aa13.15□□□□□ -0.3
TSPAN1-201ENST00000372003 CALCOCO1Q9P1Z2 691 aa13.15□□□□□ -0.3
TSPAN1-201ENST00000372003 SCN4AP35499 1836 aa13.14□□□□□ -0.31
TSPAN1-201ENST00000372003 PHLPP2Q6ZVD8 1323 aa13.14□□□□□ -0.31
TSPAN1-201ENST00000372003 MBD4O95243 580 aa13.14□□□□□ -0.31
TSPAN1-201ENST00000372003 TMED8Q6PL24 325 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms