RNA–Protein interactions for RNA: ENST00000371648.4

EDF1-202, Transcript of endothelial differentiation related factor 1, humanhuman

TSL 1 (best) BASIC

Gene EDF1, Length 809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1-202ENST00000371648 SH3D19Q5HYK7 790 aa17.34■□□□□ 0.37
EDF1-202ENST00000371648 PLEKHM2Q8IWE5 1019 aa17.34■□□□□ 0.37
EDF1-202ENST00000371648 DPF3Q92784 378 aa17.34■□□□□ 0.37
EDF1-202ENST00000371648 WDR18Q9BV38 432 aa17.34■□□□□ 0.37
EDF1-202ENST00000371648 DCP1AQ9NPI6 582 aaPredicted RBP17.34■□□□□ 0.37
EDF1-202ENST00000371648 SERPINB13Q9UIV8 391 aa17.34■□□□□ 0.37
EDF1-202ENST00000371648 PLCD1P51178 756 aa17.33■□□□□ 0.36
EDF1-202ENST00000371648 BACE1P56817 501 aa17.33■□□□□ 0.36
EDF1-202ENST00000371648 IRF5Q13568 498 aa17.33■□□□□ 0.36
EDF1-202ENST00000371648 METTL16Q86W50 562 aaKnown RBP17.33■□□□□ 0.36
EDF1-202ENST00000371648 PXYLP1Q8TE99 480 aa17.33■□□□□ 0.36
EDF1-202ENST00000371648 U2AF1L4Q8WU68 220 aaKnown RBP17.33■□□□□ 0.36
EDF1-202ENST00000371648 OSBP2Q969R2 916 aa17.33■□□□□ 0.36
EDF1-202ENST00000371648 STRBPQ96SI9 672 aaKnown RBP17.33■□□□□ 0.36
EDF1-202ENST00000371648 TMOD4Q9NZQ9 345 aa17.33■□□□□ 0.36
EDF1-202ENST00000371648 COLQQ9Y215 455 aaPredicted RBP17.33■□□□□ 0.36
EDF1-202ENST00000371648 MGAMO43451 1857 aa17.32■□□□□ 0.36
EDF1-202ENST00000371648 USP17L12C9JPN9 530 aa17.31■□□□□ 0.36
EDF1-202ENST00000371648 USP17L21D6R901 530 aa17.31■□□□□ 0.36
EDF1-202ENST00000371648 GPAA1O43292 621 aa17.31■□□□□ 0.36
EDF1-202ENST00000371648 SGPL1O95470 568 aa17.31■□□□□ 0.36
EDF1-202ENST00000371648 IRX3P78415 501 aaPredicted RBP17.31■□□□□ 0.36
EDF1-202ENST00000371648 DEFB118Q96PH6 123 aa17.31■□□□□ 0.36
EDF1-202ENST00000371648 P2RX7Q99572 595 aaKnown RBP17.31■□□□□ 0.36
EDF1-202ENST00000371648 EHD4Q9H223 541 aa17.31■□□□□ 0.36
EDF1-202ENST00000371648 ZBTB21Q9ULJ3 1066 aa17.31■□□□□ 0.36
EDF1-202ENST00000371648 BAZ2AQ9UIF9 1905 aaKnown RBP17.3■□□□□ 0.36
EDF1-202ENST00000371648 C19orf81C9J6K1 198 aa17.3■□□□□ 0.36
EDF1-202ENST00000371648 USP17L10C9JJH3 530 aa17.3■□□□□ 0.36
EDF1-202ENST00000371648 M0R2C6 588 aa17.3■□□□□ 0.36
EDF1-202ENST00000371648 PEX10O60683 326 aa17.3■□□□□ 0.36
EDF1-202ENST00000371648 TFRCP02786 760 aaKnown RBP17.3■□□□□ 0.36
EDF1-202ENST00000371648 CYP2D6P10635 497 aa17.3■□□□□ 0.36
EDF1-202ENST00000371648 GNAT2P19087 354 aa17.3■□□□□ 0.36
EDF1-202ENST00000371648 CERKLQ49MI3 558 aaPredicted RBP17.3■□□□□ 0.36
EDF1-202ENST00000371648 UBE2Q1Q7Z7E8 422 aa17.3■□□□□ 0.36
EDF1-202ENST00000371648 SEC62Q99442 399 aaKnown RBP17.3■□□□□ 0.36
EDF1-202ENST00000371648 OSBPL3Q9H4L5 887 aa17.3■□□□□ 0.36
EDF1-202ENST00000371648 NAV1Q8NEY1 1877 aa17.3■□□□□ 0.36
EDF1-202ENST00000371648 SIPA1L1O43166 1804 aa17.29■□□□□ 0.36
EDF1-202ENST00000371648 ATAD5Q96QE3 1844 aa17.29■□□□□ 0.36
EDF1-202ENST00000371648 FARP2O94887 1054 aaPredicted RBP17.29■□□□□ 0.36
EDF1-202ENST00000371648 GH2P01242 217 aa17.29■□□□□ 0.36
EDF1-202ENST00000371648 HOXA7P31268 230 aaPredicted RBP17.29■□□□□ 0.36
EDF1-202ENST00000371648 ZMYM1Q5SVZ6 1142 aa17.29■□□□□ 0.36
EDF1-202ENST00000371648 HTATIP2Q9BUP3 242 aa17.29■□□□□ 0.36
EDF1-202ENST00000371648 NACAP1Q9BZK3 213 aa17.29■□□□□ 0.36
EDF1-202ENST00000371648 CABP5Q9NP86 173 aa17.29■□□□□ 0.36
EDF1-202ENST00000371648 GINM1Q9NU53 330 aa17.29■□□□□ 0.36
EDF1-202ENST00000371648 MINDY4BA8MYZ0 360 aa17.28■□□□□ 0.36
EDF1-202ENST00000371648 PATL2C9JE40 543 aaKnown RBP17.28■□□□□ 0.36
EDF1-202ENST00000371648 TDO2P48775 406 aa17.28■□□□□ 0.36
EDF1-202ENST00000371648 MORF4L1Q9UBU8 362 aa17.28■□□□□ 0.36
EDF1-202ENST00000371648 GJD2Q9UKL4 321 aa17.28■□□□□ 0.36
EDF1-202ENST00000371648 LOC285556D6RIA3 1793 aa17.28■□□□□ 0.36
EDF1-202ENST00000371648 CEP290O15078 2479 aa17.27■□□□□ 0.36
EDF1-202ENST00000371648 CYP2D7A0A087X1C5 515 aa17.27■□□□□ 0.36
EDF1-202ENST00000371648 GSG1L2A8MUP6 293 aa17.27■□□□□ 0.36
EDF1-202ENST00000371648 MPHOSPH10O00566 681 aaKnown RBP17.27■□□□□ 0.36
EDF1-202ENST00000371648 PDE4AP27815 886 aa17.27■□□□□ 0.36
EDF1-202ENST00000371648 HERVK_113P62684 666 aa17.27■□□□□ 0.36
EDF1-202ENST00000371648 RAB3GAP1Q15042 981 aa17.27■□□□□ 0.36
EDF1-202ENST00000371648 ABCB5Q2M3G0 1257 aa17.27■□□□□ 0.36
EDF1-202ENST00000371648 C12orf60Q5U649 245 aa17.27■□□□□ 0.36
EDF1-202ENST00000371648 TATDN1Q6P1N9 297 aa17.27■□□□□ 0.36
EDF1-202ENST00000371648 CTR9Q6PD62 1173 aa17.27■□□□□ 0.36
EDF1-202ENST00000371648 CHRDL2Q6WN34 429 aa17.27■□□□□ 0.36
EDF1-202ENST00000371648 GPRC5AQ8NFJ5 357 aa17.27■□□□□ 0.36
EDF1-202ENST00000371648 DYNLL2Q96FJ2 89 aa17.27■□□□□ 0.36
EDF1-202ENST00000371648 TXNRD2Q9NNW7 524 aa17.27■□□□□ 0.36
EDF1-202ENST00000371648 PAK6Q9NQU5 681 aaPredicted RBP17.27■□□□□ 0.36
EDF1-202ENST00000371648 HELLSQ9NRZ9 838 aa17.27■□□□□ 0.36
EDF1-202ENST00000371648 EMILIN3Q9NT22 766 aa17.27■□□□□ 0.36
EDF1-202ENST00000371648 CYP2B6P20813 491 aa17.26■□□□□ 0.35
EDF1-202ENST00000371648 FXR1P51114 621 aaKnown RBP eCLIP17.26■□□□□ 0.35
EDF1-202ENST00000371648 EVX2Q03828 476 aa17.26■□□□□ 0.35
EDF1-202ENST00000371648 TRIM32Q13049 653 aa17.26■□□□□ 0.35
EDF1-202ENST00000371648 ZYXQ15942 572 aaKnown RBP17.26■□□□□ 0.35
EDF1-202ENST00000371648 GIMAP6Q6P9H5 292 aa17.26■□□□□ 0.35
EDF1-202ENST00000371648 USP17L2Q6R6M4 530 aa17.26■□□□□ 0.35
EDF1-202ENST00000371648 CCDC129Q6ZRS4 1044 aa17.26■□□□□ 0.35
EDF1-202ENST00000371648 STK11IPQ8N1F8 1099 aa17.26■□□□□ 0.35
EDF1-202ENST00000371648 CCDC136Q96JN2 1154 aa17.26■□□□□ 0.35
EDF1-202ENST00000371648 RBPJLQ9UBG7 517 aa17.26■□□□□ 0.35
EDF1-202ENST00000371648 ARPP21Q9UBL0 812 aaPredicted RBP17.26■□□□□ 0.35
EDF1-202ENST00000371648 SWAP70Q9UH65 585 aa17.26■□□□□ 0.35
EDF1-202ENST00000371648 DOCK3Q8IZD9 2030 aa17.26■□□□□ 0.35
EDF1-202ENST00000371648 HMGCRP04035 888 aa17.25■□□□□ 0.35
EDF1-202ENST00000371648 SDSP20132 328 aa17.25■□□□□ 0.35
EDF1-202ENST00000371648 SHMT1P34896 483 aa17.25■□□□□ 0.35
EDF1-202ENST00000371648 Q3C1V9 767 aa17.25■□□□□ 0.35
EDF1-202ENST00000371648 MCMDC2Q4G0Z9 681 aa17.25■□□□□ 0.35
EDF1-202ENST00000371648 CENPQQ7L2Z9 268 aaPredicted RBP17.25■□□□□ 0.35
EDF1-202ENST00000371648 TICAM2Q86XR7 235 aa17.25■□□□□ 0.35
EDF1-202ENST00000371648 IFNL3Q8IZI9 196 aa17.25■□□□□ 0.35
EDF1-202ENST00000371648 FAM227BQ96M60 508 aa17.25■□□□□ 0.35
EDF1-202ENST00000371648 FEZ1Q99689 392 aa17.25■□□□□ 0.35
EDF1-202ENST00000371648 PAGR1Q9BTK6 254 aa17.25■□□□□ 0.35
EDF1-202ENST00000371648 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.25■□□□□ 0.355e-7■■■■■ 28.7
EDF1-202ENST00000371648 DIAPH3Q9NSV4 1193 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms