RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 CNGA1P29973 690 aa16.47■□□□□ 0.23
NDC1-201ENST00000371429 CLEC4GQ6UXB4 293 aa16.47■□□□□ 0.23
NDC1-201ENST00000371429 MIER3Q7Z3K6 550 aa16.47■□□□□ 0.23
NDC1-201ENST00000371429 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.47■□□□□ 0.23
NDC1-201ENST00000371429 RNF123Q5XPI4 1314 aa16.47■□□□□ 0.23
NDC1-201ENST00000371429 CTAGE15A4D2H0 777 aa16.47■□□□□ 0.23
NDC1-201ENST00000371429 CTAGE8P0CG41 777 aa16.47■□□□□ 0.23
NDC1-201ENST00000371429 CTAGE6Q86UF2 777 aa16.47■□□□□ 0.23
NDC1-201ENST00000371429 MCF2L2Q86YR7 1114 aa16.47■□□□□ 0.23
NDC1-201ENST00000371429 CTAGE4Q8IX94 777 aa16.47■□□□□ 0.23
NDC1-201ENST00000371429 RASAL2Q9UJF2 1139 aa16.47■□□□□ 0.23
NDC1-201ENST00000371429 CLASP1Q7Z460 1538 aa16.47■□□□□ 0.23
NDC1-201ENST00000371429 OTUD6AQ7L8S5 288 aa16.47■□□□□ 0.23
NDC1-201ENST00000371429 SHTN1A0MZ66 631 aa16.47■□□□□ 0.23
NDC1-201ENST00000371429 EXOC3O60645 756 aa16.47■□□□□ 0.23
NDC1-201ENST00000371429 RBM6P78332 1123 aaKnown RBP16.47■□□□□ 0.23
NDC1-201ENST00000371429 CNGA4Q8IV77 575 aa16.47■□□□□ 0.23
NDC1-201ENST00000371429 ZNF526Q8TF50 670 aaPredicted RBP16.47■□□□□ 0.23
NDC1-201ENST00000371429 KCNG1Q9UIX4 513 aa16.47■□□□□ 0.23
NDC1-201ENST00000371429 PCP11498 1178 aaKnown RBP16.46■□□□□ 0.23
NDC1-201ENST00000371429 NT5C3AQ9H0P0 336 aa16.46■□□□□ 0.23
NDC1-201ENST00000371429 GUCA1BQ9UMX6 200 aa16.46■□□□□ 0.23
NDC1-201ENST00000371429 GRAPQ13588 217 aa16.46■□□□□ 0.23
NDC1-201ENST00000371429 BLIDQ8IZY5 108 aa16.46■□□□□ 0.23
NDC1-201ENST00000371429 GRAPLQ8TC17 118 aaPredicted RBP16.46■□□□□ 0.23
NDC1-201ENST00000371429 VPS16Q9H269 839 aa16.46■□□□□ 0.23
NDC1-201ENST00000371429 TBC1D7Q9P0N9 293 aa16.46■□□□□ 0.23
NDC1-201ENST00000371429 KDM2BQ8NHM5 1336 aa16.46■□□□□ 0.23
NDC1-201ENST00000371429 A2ML1A8K2U0 1454 aa16.46■□□□□ 0.23
NDC1-201ENST00000371429 ADD1P35611 737 aaKnown RBP16.46■□□□□ 0.23
NDC1-201ENST00000371429 SUSD4Q5VX71 490 aa16.46■□□□□ 0.23
NDC1-201ENST00000371429 OTUD6BQ8N6M0 293 aa16.46■□□□□ 0.23
NDC1-201ENST00000371429 ATG3Q9NT62 314 aa16.46■□□□□ 0.23
NDC1-201ENST00000371429 RTKN2Q8IZC4 609 aa16.46■□□□□ 0.23
NDC1-201ENST00000371429 GTF3C6Q969F1 213 aa16.46■□□□□ 0.23
NDC1-201ENST00000371429 ATP10DQ9P241 1426 aa16.46■□□□□ 0.22
NDC1-201ENST00000371429 PRR16Q569H4 304 aa16.45■□□□□ 0.22
NDC1-201ENST00000371429 LEO1Q8WVC0 666 aaPredicted RBP16.45■□□□□ 0.22
NDC1-201ENST00000371429 MRPL44Q9H9J2 332 aaKnown RBP16.45■□□□□ 0.22
NDC1-201ENST00000371429 PAXBP1Q9Y5B6 917 aa16.45■□□□□ 0.22
NDC1-201ENST00000371429 KIF1BO60333 1816 aa16.45■□□□□ 0.22
NDC1-201ENST00000371429 ATP2A1O14983 1001 aa16.45■□□□□ 0.22
NDC1-201ENST00000371429 GCNT3O95395 438 aa16.45■□□□□ 0.22
NDC1-201ENST00000371429 CCPG1Q9ULG6 757 aa16.45■□□□□ 0.22
NDC1-201ENST00000371429 ZNF202O95125 648 aa16.45■□□□□ 0.22
NDC1-201ENST00000371429 GSPT1P15170 499 aaKnown RBP16.45■□□□□ 0.22
NDC1-201ENST00000371429 MASTLQ96GX5 879 aa16.45■□□□□ 0.22
NDC1-201ENST00000371429 TRPC6Q9Y210 931 aa16.45■□□□□ 0.22
NDC1-201ENST00000371429 SWAP70Q9UH65 585 aa16.45■□□□□ 0.22
NDC1-201ENST00000371429 AXIN2Q9Y2T1 843 aa16.45■□□□□ 0.22
NDC1-201ENST00000371429 PAK1Q13153 545 aa16.44■□□□□ 0.22
NDC1-201ENST00000371429 ME3Q16798 604 aa16.44■□□□□ 0.22
NDC1-201ENST00000371429 CIAPIN1Q6FI81 312 aa16.44■□□□□ 0.22
NDC1-201ENST00000371429 CDC37L1Q7L3B6 337 aa16.44■□□□□ 0.22
NDC1-201ENST00000371429 HACE1Q8IYU2 909 aa16.44■□□□□ 0.22
NDC1-201ENST00000371429 SPICE1Q8N0Z3 855 aa16.44■□□□□ 0.22
NDC1-201ENST00000371429 PCDHA1Q9Y5I3 950 aa16.44■□□□□ 0.22
NDC1-201ENST00000371429 CTAGE9A4FU28 777 aa16.44■□□□□ 0.22
NDC1-201ENST00000371429 CCNA1P78396 465 aa16.44■□□□□ 0.22
NDC1-201ENST00000371429 KCTD2Q14681 263 aa16.44■□□□□ 0.22
NDC1-201ENST00000371429 VWA3BQ502W6 1294 aa16.44■□□□□ 0.22
NDC1-201ENST00000371429 CTR9Q6PD62 1173 aa16.44■□□□□ 0.22
NDC1-201ENST00000371429 CCDC155Q8N6L0 562 aa16.44■□□□□ 0.22
NDC1-201ENST00000371429 METTL13Q8N6R0 699 aa16.44■□□□□ 0.22
NDC1-201ENST00000371429 PPP1R14CQ8TAE6 165 aa16.44■□□□□ 0.22
NDC1-201ENST00000371429 TLR7Q9NYK1 1049 aaKnown RBP16.44■□□□□ 0.22
NDC1-201ENST00000371429 SCG2P13521 617 aa16.44■□□□□ 0.22
NDC1-201ENST00000371429 TNFAIP3P21580 790 aa16.44■□□□□ 0.22
NDC1-201ENST00000371429 NELFCDQ8IXH7 590 aa16.44■□□□□ 0.22
NDC1-201ENST00000371429 MLKLQ8NB16 471 aa16.44■□□□□ 0.22
NDC1-201ENST00000371429 NOX5Q96PH1 765 aa16.44■□□□□ 0.22
NDC1-201ENST00000371429 GRIPAP1Q4V328 841 aa16.44■□□□□ 0.22
NDC1-201ENST00000371429 CGNQ9P2M7 1197 aaKnown RBP16.44■□□□□ 0.22
NDC1-201ENST00000371429 SERPINB13Q9UIV8 391 aa16.44■□□□□ 0.22
NDC1-201ENST00000371429 DDAH1O94760 285 aa16.43■□□□□ 0.22
NDC1-201ENST00000371429 LZTFL1Q9NQ48 299 aa16.43■□□□□ 0.22
NDC1-201ENST00000371429 PIM2Q9P1W9 311 aa16.43■□□□□ 0.22
NDC1-201ENST00000371429 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.43■□□□□ 0.22
NDC1-201ENST00000371429 DEPTORQ8TB45 409 aa16.43■□□□□ 0.22
NDC1-201ENST00000371429 STAMQ92783 540 aa16.43■□□□□ 0.22
NDC1-201ENST00000371429 PCDHA12Q9UN75 941 aa16.43■□□□□ 0.22
NDC1-201ENST00000371429 ARHGEF6Q15052 776 aa16.43■□□□□ 0.22
NDC1-201ENST00000371429 INF2Q27J81 1249 aa16.43■□□□□ 0.22
NDC1-201ENST00000371429 RNF34Q969K3 372 aa16.43■□□□□ 0.22
NDC1-201ENST00000371429 CCDC77Q9BR77 488 aa16.43■□□□□ 0.22
NDC1-201ENST00000371429 C21orf2O43822 256 aa16.43■□□□□ 0.22
NDC1-201ENST00000371429 STAMBPO95630 424 aa16.43■□□□□ 0.22
NDC1-201ENST00000371429 KRT19P08727 400 aa16.43■□□□□ 0.22
NDC1-201ENST00000371429 DYNLL1P63167 89 aaKnown RBP16.43■□□□□ 0.22
NDC1-201ENST00000371429 ZMYM1Q5SVZ6 1142 aa16.43■□□□□ 0.22
NDC1-201ENST00000371429 MYSM1Q5VVJ2 828 aa16.43■□□□□ 0.22
NDC1-201ENST00000371429 GOLGA1Q92805 767 aa16.43■□□□□ 0.22
NDC1-201ENST00000371429 CDK12Q9NYV4 1490 aaPredicted RBP16.43■□□□□ 0.22
NDC1-201ENST00000371429 GPATCH4Q5T3I0 446 aaKnown RBP16.42■□□□□ 0.22
NDC1-201ENST00000371429 MED23Q9ULK4 1368 aa16.42■□□□□ 0.22
NDC1-201ENST00000371429 SYNRGQ9UMZ2 1314 aa16.42■□□□□ 0.22
NDC1-201ENST00000371429 USP17L3A6NCW0 530 aa16.42■□□□□ 0.22
NDC1-201ENST00000371429 USP17L4A6NCW7 530 aa16.42■□□□□ 0.22
NDC1-201ENST00000371429 USP17L1Q7RTZ2 530 aa16.42■□□□□ 0.22
NDC1-201ENST00000371429 ARMC9Q7Z3E5 817 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms