RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 CD19P15391 556 aa24.59■■□□□ 1.53
TM9SF3-201ENST00000371142 GABPAQ06546 454 aa24.59■■□□□ 1.53
TM9SF3-201ENST00000371142 ARHGAP44Q17R89 818 aa24.59■■□□□ 1.53
TM9SF3-201ENST00000371142 TMTC1Q8IUR5 882 aa24.59■■□□□ 1.53
TM9SF3-201ENST00000371142 DNAJC10Q8IXB1 793 aa24.59■■□□□ 1.53
TM9SF3-201ENST00000371142 PLEKHA4Q9H4M7 779 aa24.59■■□□□ 1.53
TM9SF3-201ENST00000371142 SWAP70Q9UH65 585 aa24.59■■□□□ 1.53
TM9SF3-201ENST00000371142 LRMPQ12912 555 aa24.59■■□□□ 1.53
TM9SF3-201ENST00000371142 ORAI2Q96SN7 254 aa24.59■■□□□ 1.53
TM9SF3-201ENST00000371142 ATP11AP98196 1134 aa24.58■■□□□ 1.53
TM9SF3-201ENST00000371142 GKAP1Q5VSY0 366 aaPredicted RBP24.58■■□□□ 1.53
TM9SF3-201ENST00000371142 RDH13Q8NBN7 331 aa24.58■■□□□ 1.53
TM9SF3-201ENST00000371142 TUBB2AQ13885 445 aa24.58■■□□□ 1.53
TM9SF3-201ENST00000371142 SFMBT2Q5VUG0 894 aa24.58■■□□□ 1.53
TM9SF3-201ENST00000371142 TUBB2BQ9BVA1 445 aa24.58■■□□□ 1.53
TM9SF3-201ENST00000371142 CHL1O00533 1208 aa24.58■■□□□ 1.53
TM9SF3-201ENST00000371142 HOXB7P09629 217 aa24.58■■□□□ 1.53
TM9SF3-201ENST00000371142 SF3A3Q12874 501 aaKnown RBP eCLIP24.58■■□□□ 1.53
TM9SF3-201ENST00000371142 IMPACTQ9P2X3 320 aa24.58■■□□□ 1.53
TM9SF3-201ENST00000371142 FAM184BQ9ULE4 1060 aa24.58■■□□□ 1.53
TM9SF3-201ENST00000371142 FAM98CQ17RN3 349 aaKnown RBP24.58■■□□□ 1.52
TM9SF3-201ENST00000371142 TYW1BQ6NUM6 668 aa24.58■■□□□ 1.52
TM9SF3-201ENST00000371142 RPUSD2Q8IZ73 545 aaKnown RBP24.58■■□□□ 1.52
TM9SF3-201ENST00000371142 CMTR1Q8N1G2 835 aaKnown RBP24.58■■□□□ 1.52
TM9SF3-201ENST00000371142 ZNF131P52739 623 aa24.57■■□□□ 1.52
TM9SF3-201ENST00000371142 NEDD9Q14511 834 aa24.57■■□□□ 1.52
TM9SF3-201ENST00000371142 TPH2Q8IWU9 490 aa24.57■■□□□ 1.52
TM9SF3-201ENST00000371142 CDCA7Q9BWT1 371 aaPredicted RBP24.57■■□□□ 1.52
TM9SF3-201ENST00000371142 FAM207AQ9NSI2 230 aaPredicted RBP24.57■■□□□ 1.52
TM9SF3-201ENST00000371142 SERTAD1Q9UHV2 236 aa24.57■■□□□ 1.52
TM9SF3-201ENST00000371142 TBC1D31Q96DN5 1066 aa24.57■■□□□ 1.52
TM9SF3-201ENST00000371142 LZTS2Q9BRK4 669 aa24.57■■□□□ 1.52
TM9SF3-201ENST00000371142 BCRP11274 1271 aa24.57■■□□□ 1.52
TM9SF3-201ENST00000371142 CCDC105Q8IYK2 499 aa24.57■■□□□ 1.52
TM9SF3-201ENST00000371142 EDC3Q96F86 508 aaKnown RBP24.57■■□□□ 1.52
TM9SF3-201ENST00000371142 NUP153P49790 1475 aaKnown RBP24.56■■□□□ 1.52
TM9SF3-201ENST00000371142 RSRC1Q96IZ7 334 aaKnown RBP24.56■■□□□ 1.52
TM9SF3-201ENST00000371142 EIF4G3O43432 1585 aaKnown RBP24.56■■□□□ 1.52
TM9SF3-201ENST00000371142 KDM2BQ8NHM5 1336 aa24.56■■□□□ 1.52
TM9SF3-201ENST00000371142 CASC4Q6P4E1 433 aa24.56■■□□□ 1.52
TM9SF3-201ENST00000371142 B4GALNT4Q76KP1 1039 aa24.56■■□□□ 1.52
TM9SF3-201ENST00000371142 RRAGAQ7L523 313 aa24.56■■□□□ 1.52
TM9SF3-201ENST00000371142 CERS3Q8IU89 383 aa24.56■■□□□ 1.52
TM9SF3-201ENST00000371142 TTLL3Q9Y4R7 772 aa24.56■■□□□ 1.52
TM9SF3-201ENST00000371142 ZMYM3Q14202 1370 aa24.56■■□□□ 1.52
TM9SF3-201ENST00000371142 PPARAQ07869 468 aa24.56■■□□□ 1.52
TM9SF3-201ENST00000371142 NLRC4Q9NPP4 1024 aa24.56■■□□□ 1.52
TM9SF3-201ENST00000371142 NACA2Q9H009 215 aa24.55■■□□□ 1.52
TM9SF3-201ENST00000371142 EDC4Q6P2E9 1401 aaKnown RBP24.55■■□□□ 1.52
TM9SF3-201ENST00000371142 FLOT1O75955 427 aa24.55■■□□□ 1.52
TM9SF3-201ENST00000371142 PRPF6O94906 941 aaKnown RBP24.55■■□□□ 1.52
TM9SF3-201ENST00000371142 PEX26Q7Z412 305 aa24.55■■□□□ 1.52
TM9SF3-201ENST00000371142 RPS6KA1Q15418 735 aa24.54■■□□□ 1.52
TM9SF3-201ENST00000371142 HHATQ5VTY9 493 aa24.54■■□□□ 1.52
TM9SF3-201ENST00000371142 REXO1Q8N1G1 1221 aaKnown RBP24.54■■□□□ 1.52
TM9SF3-201ENST00000371142 GOLGA6BA6NDN3 693 aa24.54■■□□□ 1.52
TM9SF3-201ENST00000371142 DDX17Q92841 729 aaKnown RBP24.54■■□□□ 1.52
TM9SF3-201ENST00000371142 SMCO2A6NFE2 343 aa24.54■■□□□ 1.52
TM9SF3-201ENST00000371142 ARHGAP6O43182 974 aa24.54■■□□□ 1.52
TM9SF3-201ENST00000371142 EPSTI1Q96J88 318 aa24.54■■□□□ 1.52
TM9SF3-201ENST00000371142 DNM2P50570 870 aa24.54■■□□□ 1.52
TM9SF3-201ENST00000371142 NAA25Q14CX7 972 aa24.54■■□□□ 1.52
TM9SF3-201ENST00000371142 SYCE1Q8N0S2 351 aa24.54■■□□□ 1.52
TM9SF3-201ENST00000371142 PSMD6Q15008 389 aa24.53■■□□□ 1.52
TM9SF3-201ENST00000371142 GBP6Q6ZN66 633 aa24.53■■□□□ 1.52
TM9SF3-201ENST00000371142 LSM14BQ9BX40 385 aaKnown RBP24.53■■□□□ 1.52
TM9SF3-201ENST00000371142 GIGYF1O75420 1035 aaPredicted RBP24.53■■□□□ 1.52
TM9SF3-201ENST00000371142 TNNI1P19237 187 aa24.53■■□□□ 1.52
TM9SF3-201ENST00000371142 ADKP55263 362 aaKnown RBP24.53■■□□□ 1.52
TM9SF3-201ENST00000371142 SDCCAG8Q86SQ7 713 aaPredicted RBP24.53■■□□□ 1.52
TM9SF3-201ENST00000371142 BIVM-ERCC5R4GMW8 1640 aa24.53■■□□□ 1.52
TM9SF3-201ENST00000371142 PPP2R5BQ15173 497 aa24.53■■□□□ 1.52
TM9SF3-201ENST00000371142 ERCC6LQ2NKX8 1250 aa24.53■■□□□ 1.52
TM9SF3-201ENST00000371142 TAOK1Q7L7X3 1001 aa24.53■■□□□ 1.52
TM9SF3-201ENST00000371142 ME3Q16798 604 aa24.53■■□□□ 1.52
TM9SF3-201ENST00000371142 PCDHB13Q9Y5F0 798 aa24.53■■□□□ 1.52
TM9SF3-201ENST00000371142 SORBS3O60504 671 aa24.53■■□□□ 1.52
TM9SF3-201ENST00000371142 SEPT14Q6ZU15 432 aa24.53■■□□□ 1.52
TM9SF3-201ENST00000371142 FRMPD2Q68DX3 1309 aaPredicted RBP24.52■■□□□ 1.52
TM9SF3-201ENST00000371142 CFAP221Q4G0U5 840 aa24.52■■□□□ 1.52
TM9SF3-201ENST00000371142 ARHGEF2Q92974 986 aaKnown RBP24.52■■□□□ 1.52
TM9SF3-201ENST00000371142 DSCC1Q9BVC3 393 aa24.52■■□□□ 1.52
TM9SF3-201ENST00000371142 USP40Q9NVE5 1235 aa24.52■■□□□ 1.52
TM9SF3-201ENST00000371142 ZNF496Q96IT1 587 aaPredicted RBP24.52■■□□□ 1.52
TM9SF3-201ENST00000371142 IFIH1Q9BYX4 1025 aaKnown RBP24.51■■□□□ 1.51
TM9SF3-201ENST00000371142 GIPC1O14908 333 aa24.51■■□□□ 1.51
TM9SF3-201ENST00000371142 KRT15P19012 456 aa24.51■■□□□ 1.51
TM9SF3-201ENST00000371142 C2CD5Q86YS7 1000 aa24.51■■□□□ 1.51
TM9SF3-201ENST00000371142 TBC1D8O95759 1140 aa24.51■■□□□ 1.51
TM9SF3-201ENST00000371142 CYP2J2P51589 502 aa24.51■■□□□ 1.51
TM9SF3-201ENST00000371142 PAK2Q13177 524 aa24.51■■□□□ 1.51
TM9SF3-201ENST00000371142 CCDC125Q86Z20 511 aa24.51■■□□□ 1.51
TM9SF3-201ENST00000371142 SND1Q7KZF4 910 aaKnown RBP eCLIP24.51■■□□□ 1.511e-6■■□□□ 13.4
TM9SF3-201ENST00000371142 ZNF654Q8IZM8 581 aa24.51■■□□□ 1.51
TM9SF3-201ENST00000371142 CCDC89Q8N998 374 aa24.51■■□□□ 1.51
TM9SF3-201ENST00000371142 RASSF4Q9H2L5 321 aa24.51■■□□□ 1.51
TM9SF3-201ENST00000371142 NEURL1BA8MQ27 555 aa24.5■■□□□ 1.51
TM9SF3-201ENST00000371142 PER1O15534 1290 aaPredicted RBP24.5■■□□□ 1.51
TM9SF3-201ENST00000371142 RUFY4Q6ZNE9 571 aa24.5■■□□□ 1.51
TM9SF3-201ENST00000371142 ZMYM4Q5VZL5 1548 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms