RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 ANKS4BQ8N8V4 417 aa9.51□□□□□ -0.89
ABCA4-201ENST00000370225 KIF21AQ7Z4S6 1674 aa9.51□□□□□ -0.89
ABCA4-201ENST00000370225 RRP9O43818 475 aaKnown RBP9.51□□□□□ -0.89
ABCA4-201ENST00000370225 MYL5Q02045 173 aa9.51□□□□□ -0.89
ABCA4-201ENST00000370225 ITIH3Q06033 890 aa9.51□□□□□ -0.89
ABCA4-201ENST00000370225 PAK1Q13153 545 aa9.51□□□□□ -0.89
ABCA4-201ENST00000370225 SPATA24Q86W54 205 aa9.51□□□□□ -0.89
ABCA4-201ENST00000370225 TBC1D31Q96DN5 1066 aa9.51□□□□□ -0.89
ABCA4-201ENST00000370225 NOX5Q96PH1 765 aa9.51□□□□□ -0.89
ABCA4-201ENST00000370225 FAM193BQ96PV7 902 aaPredicted RBP9.51□□□□□ -0.89
ABCA4-201ENST00000370225 SLC5A4Q9NY91 659 aa9.51□□□□□ -0.89
ABCA4-201ENST00000370225 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.51□□□□□ -0.89
ABCA4-201ENST00000370225 SYNJ2BP-COX16A0A087WUM0 186 aa9.51□□□□□ -0.89
ABCA4-201ENST00000370225 HPDP32754 393 aaPredicted RBP9.51□□□□□ -0.89
ABCA4-201ENST00000370225 BTDP43251 543 aa9.51□□□□□ -0.89
ABCA4-201ENST00000370225 UBXN2AP68543 259 aa9.51□□□□□ -0.89
ABCA4-201ENST00000370225 C4orf50Q6ZRC1 276 aa9.51□□□□□ -0.89
ABCA4-201ENST00000370225 TAB2Q9NYJ8 693 aa9.51□□□□□ -0.89
ABCA4-201ENST00000370225 COX16Q9P0S2 106 aa9.51□□□□□ -0.89
ABCA4-201ENST00000370225 TECP42680 631 aa9.51□□□□□ -0.89
ABCA4-201ENST00000370225 TNNC1P63316 161 aa9.51□□□□□ -0.89
ABCA4-201ENST00000370225 PTPROQ16827 1216 aa9.51□□□□□ -0.89
ABCA4-201ENST00000370225 NSMCE1Q8WV22 266 aa9.51□□□□□ -0.89
ABCA4-201ENST00000370225 GPKOWQ92917 476 aaPredicted RBP eCLIP9.51□□□□□ -0.89
ABCA4-201ENST00000370225 CTTNBP2NLQ9P2B4 639 aa9.51□□□□□ -0.89
ABCA4-201ENST00000370225 EDC4Q6P2E9 1401 aaKnown RBP9.5□□□□□ -0.89
ABCA4-201ENST00000370225 NEURL1BA8MQ27 555 aa9.5□□□□□ -0.89
ABCA4-201ENST00000370225 NOP9Q86U38 636 aaKnown RBP9.5□□□□□ -0.89
ABCA4-201ENST00000370225 GSDMBQ8TAX9 411 aa9.5□□□□□ -0.89
ABCA4-201ENST00000370225 SPDYE16A6NNV3 312 aaPredicted RBP9.5□□□□□ -0.89
ABCA4-201ENST00000370225 JAK2O60674 1132 aa9.5□□□□□ -0.89
ABCA4-201ENST00000370225 TNFAIP1Q13829 316 aa9.5□□□□□ -0.89
ABCA4-201ENST00000370225 SPDYE2Q495Y8 402 aa9.5□□□□□ -0.89
ABCA4-201ENST00000370225 KRT25Q7Z3Z0 450 aa9.5□□□□□ -0.89
ABCA4-201ENST00000370225 CPLX4Q7Z7G2 160 aa9.5□□□□□ -0.89
ABCA4-201ENST00000370225 CCDC125Q86Z20 511 aa9.5□□□□□ -0.89
ABCA4-201ENST00000370225 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.5□□□□□ -0.89
ABCA4-201ENST00000370225 PCDHB13Q9Y5F0 798 aa9.5□□□□□ -0.89
ABCA4-201ENST00000370225 PPEF1O14829 653 aaPredicted RBP9.5□□□□□ -0.89
ABCA4-201ENST00000370225 ITKQ08881 620 aa9.5□□□□□ -0.89
ABCA4-201ENST00000370225 OTUD6AQ7L8S5 288 aa9.5□□□□□ -0.89
ABCA4-201ENST00000370225 CNGA4Q8IV77 575 aa9.5□□□□□ -0.89
ABCA4-201ENST00000370225 REXO1Q8N1G1 1221 aaKnown RBP9.5□□□□□ -0.89
ABCA4-201ENST00000370225 TBC1D22AQ8WUA7 517 aa9.5□□□□□ -0.89
ABCA4-201ENST00000370225 NELFBQ8WX92 580 aa9.5□□□□□ -0.89
ABCA4-201ENST00000370225 PALM3A6NDB9 673 aaPredicted RBP9.5□□□□□ -0.89
ABCA4-201ENST00000370225 ZBTB24O43167 697 aaPredicted RBP9.5□□□□□ -0.89
ABCA4-201ENST00000370225 SCYL2Q6P3W7 929 aa9.5□□□□□ -0.89
ABCA4-201ENST00000370225 IBTKQ9P2D0 1353 aaPredicted RBP9.5□□□□□ -0.89
ABCA4-201ENST00000370225 ANKFY1Q9P2R3 1169 aa9.5□□□□□ -0.89
ABCA4-201ENST00000370225 AFG3L2Q9Y4W6 797 aa9.5□□□□□ -0.89
ABCA4-201ENST00000370225 RXRBP28702 533 aa9.5□□□□□ -0.89
ABCA4-201ENST00000370225 GTF3C6Q969F1 213 aa9.5□□□□□ -0.89
ABCA4-201ENST00000370225 DBNDD1Q9H9R9 158 aa9.5□□□□□ -0.89
ABCA4-201ENST00000370225 SEPT10Q9P0V9 454 aa9.5□□□□□ -0.89
ABCA4-201ENST00000370225 POLA2Q14181 598 aa9.5□□□□□ -0.89
ABCA4-201ENST00000370225 TRMT44Q8IYL2 757 aaKnown RBP9.5□□□□□ -0.89
ABCA4-201ENST00000370225 KBTBD3Q8NAB2 608 aa9.5□□□□□ -0.89
ABCA4-201ENST00000370225 NUP160Q12769 1436 aa9.49□□□□□ -0.89
ABCA4-201ENST00000370225 E7EWF7 191 aa9.49□□□□□ -0.89
ABCA4-201ENST00000370225 GMNNO75496 209 aa9.49□□□□□ -0.89
ABCA4-201ENST00000370225 DPP9Q86TI2 863 aa9.49□□□□□ -0.89
ABCA4-201ENST00000370225 TTC14Q96N46 770 aa9.49□□□□□ -0.89
ABCA4-201ENST00000370225 ZHX1Q9UKY1 873 aaPredicted RBP9.49□□□□□ -0.89
ABCA4-201ENST00000370225 PARD3Q8TEW0 1356 aa9.49□□□□□ -0.89
ABCA4-201ENST00000370225 UBL4BQ8N7F7 174 aa9.49□□□□□ -0.89
ABCA4-201ENST00000370225 NBPF3Q9H094 633 aa9.49□□□□□ -0.89
ABCA4-201ENST00000370225 ABT1Q9ULW3 272 aaKnown RBP9.49□□□□□ -0.89
ABCA4-201ENST00000370225 MAN1A1P33908 653 aa9.49□□□□□ -0.89
ABCA4-201ENST00000370225 CHRNDQ07001 517 aa9.49□□□□□ -0.89
ABCA4-201ENST00000370225 XKR9Q5GH70 373 aa9.49□□□□□ -0.89
ABCA4-201ENST00000370225 ZNF365Q70YC5 407 aa9.49□□□□□ -0.89
ABCA4-201ENST00000370225 CCDC26Q8TAB7 109 aa9.49□□□□□ -0.89
ABCA4-201ENST00000370225 PSTPIP2Q9H939 334 aa9.49□□□□□ -0.89
ABCA4-201ENST00000370225 ATP10AO60312 1499 aa9.49□□□□□ -0.89
ABCA4-201ENST00000370225 VAV2P52735 878 aa9.49□□□□□ -0.89
ABCA4-201ENST00000370225 EIF4A1P60842 406 aaKnown RBP9.49□□□□□ -0.89
ABCA4-201ENST00000370225 GNPTABQ3T906 1256 aa9.49□□□□□ -0.89
ABCA4-201ENST00000370225 HACE1Q8IYU2 909 aa9.49□□□□□ -0.89
ABCA4-201ENST00000370225 GPR161Q8N6U8 529 aaKnown RBP9.49□□□□□ -0.89
ABCA4-201ENST00000370225 PPP1R16BQ96T49 567 aa9.49□□□□□ -0.89
ABCA4-201ENST00000370225 ARPP21Q9UBL0 812 aaPredicted RBP9.49□□□□□ -0.89
ABCA4-201ENST00000370225 UTP11Q9Y3A2 253 aaKnown RBP9.49□□□□□ -0.89
ABCA4-201ENST00000370225 MAST1Q9Y2H9 1570 aa9.49□□□□□ -0.89
ABCA4-201ENST00000370225 CRKLP46109 303 aaKnown RBP9.49□□□□□ -0.89
ABCA4-201ENST00000370225 PNOCQ13519 176 aa9.49□□□□□ -0.89
ABCA4-201ENST00000370225 LRRC24Q50LG9 513 aa9.49□□□□□ -0.89
ABCA4-201ENST00000370225 CHURC1Q8WUH1 139 aa9.49□□□□□ -0.89
ABCA4-201ENST00000370225 SNX21Q969T3 373 aa9.49□□□□□ -0.89
ABCA4-201ENST00000370225 VIMP08670 466 aaKnown RBP9.48□□□□□ -0.89
ABCA4-201ENST00000370225 CUL4BQ13620 913 aa9.48□□□□□ -0.89
ABCA4-201ENST00000370225 CDC37L1Q7L3B6 337 aa9.48□□□□□ -0.89
ABCA4-201ENST00000370225 GPBP1Q86WP2 473 aa9.48□□□□□ -0.89
ABCA4-201ENST00000370225 NR1I2O75469 434 aa9.48□□□□□ -0.89
ABCA4-201ENST00000370225 LIG4P49917 911 aa9.48□□□□□ -0.89
ABCA4-201ENST00000370225 KRT40Q6A162 431 aa9.48□□□□□ -0.89
ABCA4-201ENST00000370225 SEPT14Q6ZU15 432 aa9.48□□□□□ -0.89
ABCA4-201ENST00000370225 KLHL7Q8IXQ5 586 aa9.48□□□□□ -0.89
ABCA4-201ENST00000370225 VPS52Q8N1B4 723 aa9.48□□□□□ -0.89
ABCA4-201ENST00000370225 CCDC110Q8TBZ0 833 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms