RNA–Protein interactions for RNA: ENST00000369727.3

SFR1-201, Transcript of SWI5 dependent homologous recombination repair protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SFR1, Length 1,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1-201ENST00000369727 PLBD2Q8NHP8 589 aa9.63□□□□□ -0.87
SFR1-201ENST00000369727 UTP14AQ9BVJ6 771 aaKnown RBP9.63□□□□□ -0.87
SFR1-201ENST00000369727 TAOK3Q9H2K8 898 aa9.63□□□□□ -0.87
SFR1-201ENST00000369727 TIAM2Q8IVF5 1701 aa9.62□□□□□ -0.87
SFR1-201ENST00000369727 FAM196BA6NMK8 535 aa9.62□□□□□ -0.87
SFR1-201ENST00000369727 SIN3BO75182 1162 aa9.62□□□□□ -0.87
SFR1-201ENST00000369727 RAB44Q7Z6P3 723 aaPredicted RBP9.62□□□□□ -0.87
SFR1-201ENST00000369727 MDFIQ99750 246 aa9.62□□□□□ -0.87
SFR1-201ENST00000369727 NMRK2Q9NPI5 230 aa9.62□□□□□ -0.87
SFR1-201ENST00000369727 IL16Q14005 1332 aa9.62□□□□□ -0.87
SFR1-201ENST00000369727 GLTPD2A6NH11 291 aa9.61□□□□□ -0.87
SFR1-201ENST00000369727 TOMM70O94826 608 aa9.61□□□□□ -0.87
SFR1-201ENST00000369727 ALAS2P22557 587 aa9.61□□□□□ -0.87
SFR1-201ENST00000369727 NLRP10Q86W26 655 aa9.61□□□□□ -0.87
SFR1-201ENST00000369727 RTKN2Q8IZC4 609 aa9.61□□□□□ -0.87
SFR1-201ENST00000369727 RPGRQ92834 1020 aaKnown RBP9.61□□□□□ -0.87
SFR1-201ENST00000369727 CRAMP1Q96RY5 1269 aa9.61□□□□□ -0.87
SFR1-201ENST00000369727 KCNH4Q9UQ05 1017 aa9.61□□□□□ -0.87
SFR1-201ENST00000369727 ELL2O00472 640 aaPredicted RBP9.6□□□□□ -0.87
SFR1-201ENST00000369727 FKBP4Q02790 459 aaKnown RBP eCLIP9.6□□□□□ -0.87
SFR1-201ENST00000369727 CCDC30Q5VVM6 783 aa9.6□□□□□ -0.87
SFR1-201ENST00000369727 C8orf58Q8NAV2 365 aa9.6□□□□□ -0.87
SFR1-201ENST00000369727 RBM17Q96I25 401 aaKnown RBP9.6□□□□□ -0.87
SFR1-201ENST00000369727 ISCA1Q9BUE6 129 aa9.6□□□□□ -0.87
SFR1-201ENST00000369727 NOP53Q9NZM5 478 aaKnown RBP9.6□□□□□ -0.87
SFR1-201ENST00000369727 SH3TC1Q8TE82 1336 aa9.6□□□□□ -0.87
SFR1-201ENST00000369727 LAMB2P55268 1798 aa9.6□□□□□ -0.87
SFR1-201ENST00000369727 CACNA1FO60840 1977 aa9.59□□□□□ -0.87
SFR1-201ENST00000369727 LOC100996750A0A140TA64 210 aa9.59□□□□□ -0.87
SFR1-201ENST00000369727 ADARB2-AS1A8MUL3 147 aa9.59□□□□□ -0.87
SFR1-201ENST00000369727 TRIM28Q13263 835 aaKnown RBP9.59□□□□□ -0.87
SFR1-201ENST00000369727 BTLAQ7Z6A9 289 aa9.59□□□□□ -0.87
SFR1-201ENST00000369727 WDR63Q8IWG1 891 aa9.59□□□□□ -0.87
SFR1-201ENST00000369727 TRIM11Q96F44 468 aa9.59□□□□□ -0.87
SFR1-201ENST00000369727 KRTAP4-6Q9BYQ5 205 aa9.59□□□□□ -0.87
SFR1-201ENST00000369727 TRMT112Q9UI30 125 aaKnown RBP9.59□□□□□ -0.87
SFR1-201ENST00000369727 IGFBP4P22692 258 aa9.58□□□□□ -0.88
SFR1-201ENST00000369727 C16orf71Q8IYS4 520 aaPredicted RBP9.58□□□□□ -0.88
SFR1-201ENST00000369727 SNED1Q8TER0 1413 aa9.58□□□□□ -0.88
SFR1-201ENST00000369727 TNFRSF25Q93038 417 aa9.58□□□□□ -0.88
SFR1-201ENST00000369727 TSR2Q969E8 191 aaKnown RBP9.58□□□□□ -0.88
SFR1-201ENST00000369727 PSMD1Q99460 953 aa9.58□□□□□ -0.88
SFR1-201ENST00000369727 WDR90Q96KV7 1748 aa9.58□□□□□ -0.88
SFR1-201ENST00000369727 DDX58O95786 925 aaKnown RBP9.57□□□□□ -0.88
SFR1-201ENST00000369727 VEGFAP15692 232 aaPredicted RBP9.57□□□□□ -0.88
SFR1-201ENST00000369727 HSPA6P17066 643 aa9.57□□□□□ -0.88
SFR1-201ENST00000369727 HIF1AQ16665 826 aa9.57□□□□□ -0.88
SFR1-201ENST00000369727 RTN1Q16799 776 aa9.57□□□□□ -0.88
SFR1-201ENST00000369727 TSPYL6Q8N831 410 aa9.57□□□□□ -0.88
SFR1-201ENST00000369727 PLVAPQ9BX97 442 aa9.57□□□□□ -0.88
SFR1-201ENST00000369727 PHAXQ9H814 394 aaKnown RBP9.57□□□□□ -0.88
SFR1-201ENST00000369727 DDX60Q8IY21 1712 aaKnown RBP9.57□□□□□ -0.88
SFR1-201ENST00000369727 BBOX1O75936 387 aa9.56□□□□□ -0.88
SFR1-201ENST00000369727 HCLS1P14317 486 aaPredicted RBP9.56□□□□□ -0.88
SFR1-201ENST00000369727 TWISTNBQ3B726 338 aaPredicted RBP9.56□□□□□ -0.88
SFR1-201ENST00000369727 OLFM4Q6UX06 510 aa9.56□□□□□ -0.88
SFR1-201ENST00000369727 FAM9BQ8IZU0 186 aa9.56□□□□□ -0.88
SFR1-201ENST00000369727 SYNE4Q8N205 404 aa9.56□□□□□ -0.88
SFR1-201ENST00000369727 STK31Q9BXU1 1019 aa9.56□□□□□ -0.88
SFR1-201ENST00000369727 TMX4Q9H1E5 349 aaPredicted RBP9.56□□□□□ -0.88
SFR1-201ENST00000369727 ABCC4O15439 1325 aa9.56□□□□□ -0.88
SFR1-201ENST00000369727 FANCIQ9NVI1 1328 aa9.56□□□□□ -0.88
SFR1-201ENST00000369727 C1QTNF9BB2RNN3 333 aa9.56□□□□□ -0.88
SFR1-201ENST00000369727 HSP90B1P14625 803 aaKnown RBP9.56□□□□□ -0.88
SFR1-201ENST00000369727 ADH7P40394 386 aa9.56□□□□□ -0.88
SFR1-201ENST00000369727 IARSP41252 1262 aaKnown RBP9.56□□□□□ -0.88
SFR1-201ENST00000369727 FSTL1Q12841 308 aa9.56□□□□□ -0.88
SFR1-201ENST00000369727 SF3B3Q15393 1217 aaKnown RBP9.56□□□□□ -0.88
SFR1-201ENST00000369727 DDX46Q7L014 1031 aaKnown RBP9.56□□□□□ -0.88
SFR1-201ENST00000369727 TMC4Q7Z404 712 aa9.56□□□□□ -0.88
SFR1-201ENST00000369727 CCDC191Q8NCU4 936 aa9.56□□□□□ -0.88
SFR1-201ENST00000369727 BHMTQ93088 406 aa9.56□□□□□ -0.88
SFR1-201ENST00000369727 METTL22Q9BUU2 404 aaPredicted RBP9.56□□□□□ -0.88
SFR1-201ENST00000369727 ZNF277Q9NRM2 450 aaPredicted RBP9.56□□□□□ -0.88
SFR1-201ENST00000369727 STARD13Q9Y3M8 1113 aa9.56□□□□□ -0.88
SFR1-201ENST00000369727 ATP6V0A2Q9Y487 856 aa9.56□□□□□ -0.88
SFR1-201ENST00000369727 M0R082 166 aa9.55□□□□□ -0.88
SFR1-201ENST00000369727 GRAPQ13588 217 aa9.55□□□□□ -0.88
SFR1-201ENST00000369727 KSR2Q6VAB6 950 aa9.55□□□□□ -0.88
SFR1-201ENST00000369727 CD163Q86VB7 1156 aa9.55□□□□□ -0.88
SFR1-201ENST00000369727 SP8Q8IXZ3 490 aa9.55□□□□□ -0.88
SFR1-201ENST00000369727 ZBTB38Q8NAP3 1195 aaPredicted RBP9.55□□□□□ -0.88
SFR1-201ENST00000369727 ZNF417Q8TAU3 575 aa9.55□□□□□ -0.88
SFR1-201ENST00000369727 GRAPLQ8TC17 118 aaPredicted RBP9.55□□□□□ -0.88
SFR1-201ENST00000369727 FAM89AQ96GI7 184 aa9.55□□□□□ -0.88
SFR1-201ENST00000369727 ZNF587Q96SQ5 575 aaPredicted RBP9.55□□□□□ -0.88
SFR1-201ENST00000369727 MYD88Q99836 296 aa9.55□□□□□ -0.88
SFR1-201ENST00000369727 VPS33BQ9H267 617 aa9.55□□□□□ -0.88
SFR1-201ENST00000369727 SCN4AP35499 1836 aa9.55□□□□□ -0.88
SFR1-201ENST00000369727 TAF1P21675 1872 aa9.54□□□□□ -0.88
SFR1-201ENST00000369727 FZD9O00144 591 aa9.54□□□□□ -0.88
SFR1-201ENST00000369727 IRS4O14654 1257 aaPredicted RBP9.54□□□□□ -0.88
SFR1-201ENST00000369727 DDNO94850 711 aaPredicted RBP9.54□□□□□ -0.88
SFR1-201ENST00000369727 PCCAP05165 728 aaPredicted RBP9.54□□□□□ -0.88
SFR1-201ENST00000369727 RFX1P22670 979 aa9.54□□□□□ -0.88
SFR1-201ENST00000369727 CHRNA4P43681 627 aa9.54□□□□□ -0.88
SFR1-201ENST00000369727 IER5Q5VY09 327 aa9.54□□□□□ -0.88
SFR1-201ENST00000369727 SMC1BQ8NDV3 1235 aa9.54□□□□□ -0.88
SFR1-201ENST00000369727 SUPT20HQ8NEM7 779 aa9.54□□□□□ -0.88
SFR1-201ENST00000369727 JDP2Q8WYK2 163 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms