RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.94□□□□□ -0.5
TPM3-210ENST00000368530 RAI14Q9P0K7 980 aa11.94□□□□□ -0.5
TPM3-210ENST00000368530 PI4KBQ9UBF8 816 aa11.94□□□□□ -0.5
TPM3-210ENST00000368530 A0A1W2PPC1 479 aa11.93□□□□□ -0.5
TPM3-210ENST00000368530 EVI5O60447 810 aa11.93□□□□□ -0.5
TPM3-210ENST00000368530 EIF5BO60841 1220 aaKnown RBP11.93□□□□□ -0.5
TPM3-210ENST00000368530 HOXA7P31268 230 aaPredicted RBP11.93□□□□□ -0.5
TPM3-210ENST00000368530 BECN1Q14457 450 aa11.93□□□□□ -0.5
TPM3-210ENST00000368530 MAP3K21Q5TCX8 1036 aa11.93□□□□□ -0.5
TPM3-210ENST00000368530 P2RX7Q99572 595 aaKnown RBP11.93□□□□□ -0.5
TPM3-210ENST00000368530 DBNDD2Q9BQY9 259 aa11.93□□□□□ -0.5
TPM3-210ENST00000368530 BOLA2Q9H3K6 86 aa11.93□□□□□ -0.5
TPM3-210ENST00000368530 TXNRD2Q9NNW7 524 aa11.93□□□□□ -0.5
TPM3-210ENST00000368530 GPR108Q9NPR9 543 aa11.93□□□□□ -0.5
TPM3-210ENST00000368530 DBNLQ9UJU6 430 aaKnown RBP11.93□□□□□ -0.5
TPM3-210ENST00000368530 SIPA1L1O43166 1804 aa11.93□□□□□ -0.5
TPM3-210ENST00000368530 RPTORQ8N122 1335 aa11.92□□□□□ -0.5
TPM3-210ENST00000368530 REC8O95072 547 aa11.92□□□□□ -0.5
TPM3-210ENST00000368530 HMGCRP04035 888 aa11.92□□□□□ -0.5
TPM3-210ENST00000368530 CYP2E1P05181 493 aaPredicted RBP11.92□□□□□ -0.5
TPM3-210ENST00000368530 UQCRFS1P1P0C7P4 283 aa11.92□□□□□ -0.5
TPM3-210ENST00000368530 BACE1P56817 501 aa11.92□□□□□ -0.5
TPM3-210ENST00000368530 GORABQ5T7V8 394 aa11.92□□□□□ -0.5
TPM3-210ENST00000368530 ANKLE1Q8NAG6 615 aa11.92□□□□□ -0.5
TPM3-210ENST00000368530 TRIB2Q92519 343 aa11.92□□□□□ -0.5
TPM3-210ENST00000368530 GDF15Q99988 308 aa11.92□□□□□ -0.5
TPM3-210ENST00000368530 USP26Q9BXU7 913 aa11.92□□□□□ -0.5
TPM3-210ENST00000368530 DHX36Q9H2U1 1008 aaKnown RBP11.92□□□□□ -0.5
TPM3-210ENST00000368530 SNRKQ9NRH2 765 aa11.92□□□□□ -0.5
TPM3-210ENST00000368530 LRP2BPQ9P2M1 347 aa11.92□□□□□ -0.5
TPM3-210ENST00000368530 RBPJLQ9UBG7 517 aa11.92□□□□□ -0.5
TPM3-210ENST00000368530 TAOK2Q9UL54 1235 aa11.92□□□□□ -0.5
TPM3-210ENST00000368530 PABPC4Q13310 644 aaKnown RBP eCLIP11.91□□□□□ -0.5
TPM3-210ENST00000368530 MTMR2Q13614 643 aa11.91□□□□□ -0.5
TPM3-210ENST00000368530 Q3C1V9 767 aa11.91□□□□□ -0.5
TPM3-210ENST00000368530 NECAB2Q7Z6G3 386 aa11.91□□□□□ -0.5
TPM3-210ENST00000368530 FOXP4Q8IVH2 680 aaPredicted RBP11.91□□□□□ -0.5
TPM3-210ENST00000368530 USP6NLQ92738 828 aa11.91□□□□□ -0.5
TPM3-210ENST00000368530 LRCH3Q96II8 777 aa11.91□□□□□ -0.5
TPM3-210ENST00000368530 AATFQ9NY61 560 aaKnown RBP eCLIP11.91□□□□□ -0.5
TPM3-210ENST00000368530 PLXNB2O15031 1838 aa11.91□□□□□ -0.5
TPM3-210ENST00000368530 FLT1P17948 1338 aa11.91□□□□□ -0.5
TPM3-210ENST00000368530 ASNSP08243 561 aa11.91□□□□□ -0.5
TPM3-210ENST00000368530 BMP8BP34820 402 aa11.91□□□□□ -0.5
TPM3-210ENST00000368530 NAA16Q6N069 864 aaPredicted RBP11.91□□□□□ -0.5
TPM3-210ENST00000368530 MAPKAPK5Q8IW41 473 aa11.91□□□□□ -0.5
TPM3-210ENST00000368530 TGFBRAP1Q8WUH2 860 aa11.91□□□□□ -0.5
TPM3-210ENST00000368530 ZNF512BQ96KM6 892 aaPredicted RBP11.91□□□□□ -0.5
TPM3-210ENST00000368530 IL25Q9H293 177 aa11.91□□□□□ -0.5
TPM3-210ENST00000368530 AS3MTQ9HBK9 375 aa11.91□□□□□ -0.5
TPM3-210ENST00000368530 HMX1Q9NP08 348 aaPredicted RBP11.91□□□□□ -0.5
TPM3-210ENST00000368530 ANO2Q9NQ90 1003 aa11.91□□□□□ -0.5
TPM3-210ENST00000368530 OGDHLQ9ULD0 1010 aa11.91□□□□□ -0.5
TPM3-210ENST00000368530 PALD1Q9ULE6 856 aa11.91□□□□□ -0.5
TPM3-210ENST00000368530 ALPK3Q96L96 1907 aa11.9□□□□□ -0.5
TPM3-210ENST00000368530 COL6A3P12111 3177 aa11.9□□□□□ -0.5
TPM3-210ENST00000368530 C19orf81C9J6K1 198 aa11.9□□□□□ -0.5
TPM3-210ENST00000368530 XRCC5P13010 732 aaKnown RBP11.9□□□□□ -0.5
TPM3-210ENST00000368530 HERVK_113P62684 666 aa11.9□□□□□ -0.5
TPM3-210ENST00000368530 CWC27Q6UX04 472 aaKnown RBP11.9□□□□□ -0.5
TPM3-210ENST00000368530 EVI5LQ96CN4 794 aa11.9□□□□□ -0.5
TPM3-210ENST00000368530 EDC3Q96F86 508 aaKnown RBP11.9□□□□□ -0.5
TPM3-210ENST00000368530 DNAJC2Q99543 621 aaKnown RBP11.9□□□□□ -0.5
TPM3-210ENST00000368530 KIF2CQ99661 725 aa11.9□□□□□ -0.5
TPM3-210ENST00000368530 PIH1D3Q9NQM4 214 aaKnown RBP11.9□□□□□ -0.5
TPM3-210ENST00000368530 DIAPH3Q9NSV4 1193 aa11.9□□□□□ -0.5
TPM3-210ENST00000368530 EMILIN3Q9NT22 766 aa11.9□□□□□ -0.5
TPM3-210ENST00000368530 NDUFB9Q9Y6M9 179 aa11.9□□□□□ -0.5
TPM3-210ENST00000368530 USP17L10C9JJH3 530 aa11.89□□□□□ -0.51
TPM3-210ENST00000368530 BAG3O95817 575 aa11.89□□□□□ -0.51
TPM3-210ENST00000368530 PLCG2P16885 1265 aa11.89□□□□□ -0.51
TPM3-210ENST00000368530 ATP5JP18859 108 aa11.89□□□□□ -0.51
TPM3-210ENST00000368530 CYP2B6P20813 491 aa11.89□□□□□ -0.51
TPM3-210ENST00000368530 ZAP70P43403 619 aa11.89□□□□□ -0.51
TPM3-210ENST00000368530 DYNLL1P63167 89 aaKnown RBP11.89□□□□□ -0.51
TPM3-210ENST00000368530 FSD1Q9BTV5 496 aa11.89□□□□□ -0.51
TPM3-210ENST00000368530 NBPF3Q9H094 633 aa11.89□□□□□ -0.51
TPM3-210ENST00000368530 PORCNQ9H237 461 aa11.89□□□□□ -0.51
TPM3-210ENST00000368530 GINM1Q9NU53 330 aa11.89□□□□□ -0.51
TPM3-210ENST00000368530 ZBTB21Q9ULJ3 1066 aa11.89□□□□□ -0.51
TPM3-210ENST00000368530 ATAD5Q96QE3 1844 aa11.89□□□□□ -0.51
TPM3-210ENST00000368530 PFASO15067 1338 aa11.88□□□□□ -0.51
TPM3-210ENST00000368530 IGSF3O75054 1194 aa11.88□□□□□ -0.51
TPM3-210ENST00000368530 GDF11O95390 407 aa11.88□□□□□ -0.51
TPM3-210ENST00000368530 COL6A1P12109 1028 aa11.88□□□□□ -0.51
TPM3-210ENST00000368530 IRX3P78415 501 aaPredicted RBP11.88□□□□□ -0.51
TPM3-210ENST00000368530 TTC39AQ5SRH9 613 aa11.88□□□□□ -0.51
TPM3-210ENST00000368530 MORN1Q5T089 497 aa11.88□□□□□ -0.51
TPM3-210ENST00000368530 LHX8Q68G74 356 aa11.88□□□□□ -0.51
TPM3-210ENST00000368530 SPRYD3Q8NCJ5 442 aa11.88□□□□□ -0.51
TPM3-210ENST00000368530 GPRC5AQ8NFJ5 357 aa11.88□□□□□ -0.51
TPM3-210ENST00000368530 RTN4Q9NQC3 1192 aaKnown RBP11.88□□□□□ -0.51
TPM3-210ENST00000368530 PRKAR2AP13861 404 aaKnown RBP11.87□□□□□ -0.51
TPM3-210ENST00000368530 FXR2P51116 673 aaKnown RBP eCLIP11.87□□□□□ -0.512e-6■■■□□ 15.5
TPM3-210ENST00000368530 CACNB2Q08289 660 aaPredicted RBP11.87□□□□□ -0.51
TPM3-210ENST00000368530 CCL14Q16627 93 aa11.87□□□□□ -0.51
TPM3-210ENST00000368530 CCDC158Q5M9N0 1113 aa11.87□□□□□ -0.51
TPM3-210ENST00000368530 TATDN1Q6P1N9 297 aa11.87□□□□□ -0.51
TPM3-210ENST00000368530 HSCBQ8IWL3 235 aa11.87□□□□□ -0.51
TPM3-210ENST00000368530 C7orf61Q8IZ16 206 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms