RNA–Protein interactions for RNA: ENST00000368301.6

LMNA-207, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-207ENST00000368301 CALM2P0DP24 149 aa20.81■□□□□ 0.92
LMNA-207ENST00000368301 CALM3P0DP25 149 aa20.81■□□□□ 0.92
LMNA-207ENST00000368301 KRT2P35908 639 aa20.81■□□□□ 0.92
LMNA-207ENST00000368301 PDE4BQ07343 736 aa20.81■□□□□ 0.92
LMNA-207ENST00000368301 C12orf60Q5U649 245 aa20.81■□□□□ 0.92
LMNA-207ENST00000368301 IL17RBQ9NRM6 502 aa20.81■□□□□ 0.92
LMNA-207ENST00000368301 PCDHA5Q9Y5H7 936 aa20.81■□□□□ 0.92
LMNA-207ENST00000368301 POLR2DO15514 142 aaKnown RBP20.8■□□□□ 0.92
LMNA-207ENST00000368301 UFL1O94874 794 aa20.8■□□□□ 0.92
LMNA-207ENST00000368301 PRR29P0C7W0 189 aa20.8■□□□□ 0.92
LMNA-207ENST00000368301 MDM2Q00987 491 aaPredicted RBP20.8■□□□□ 0.92
LMNA-207ENST00000368301 LRRC8AQ8IWT6 810 aa20.8■□□□□ 0.92
LMNA-207ENST00000368301 GRAMD1CQ8IYS0 662 aa20.8■□□□□ 0.92
LMNA-207ENST00000368301 SLC44A5Q8NCS7 719 aa20.8■□□□□ 0.92
LMNA-207ENST00000368301 CSRNP2Q9H175 543 aa20.8■□□□□ 0.92
LMNA-207ENST00000368301 BMP6P22004 513 aa20.8■□□□□ 0.92
LMNA-207ENST00000368301 TFAP4Q01664 338 aa20.8■□□□□ 0.92
LMNA-207ENST00000368301 ZNF804AQ7Z570 1209 aa20.8■□□□□ 0.92
LMNA-207ENST00000368301 PDILTQ8N807 584 aa20.8■□□□□ 0.92
LMNA-207ENST00000368301 CTCFLQ8NI51 663 aaPredicted RBP20.8■□□□□ 0.92
LMNA-207ENST00000368301 TGFBRAP1Q8WUH2 860 aa20.8■□□□□ 0.92
LMNA-207ENST00000368301 XPO4Q9C0E2 1151 aaKnown RBP20.8■□□□□ 0.92
LMNA-207ENST00000368301 IFNKQ9P0W0 207 aa20.8■□□□□ 0.92
LMNA-207ENST00000368301 SERTAD1Q9UHV2 236 aa20.8■□□□□ 0.92
LMNA-207ENST00000368301 SRPRBQ9Y5M8 271 aaKnown RBP20.8■□□□□ 0.92
LMNA-207ENST00000368301 ATP1A3P13637 1013 aa20.79■□□□□ 0.92
LMNA-207ENST00000368301 ADRA2BP18089 450 aa20.79■□□□□ 0.92
LMNA-207ENST00000368301 LMOD1P29536 600 aaPredicted RBP20.79■□□□□ 0.92
LMNA-207ENST00000368301 CRY2Q49AN0 593 aa20.79■□□□□ 0.92
LMNA-207ENST00000368301 SAP30BPQ9UHR5 308 aaKnown RBP20.79■□□□□ 0.92
LMNA-207ENST00000368301 SMC2O95347 1197 aa20.79■□□□□ 0.92
LMNA-207ENST00000368301 XBP1P17861 261 aa20.79■□□□□ 0.92
LMNA-207ENST00000368301 DDR1Q08345 913 aa20.79■□□□□ 0.92
LMNA-207ENST00000368301 TNFRSF25Q93038 417 aa20.79■□□□□ 0.92
LMNA-207ENST00000368301 TRPC5Q9UL62 973 aaPredicted RBP20.79■□□□□ 0.92
LMNA-207ENST00000368301 USP17L3A6NCW0 530 aa20.78■□□□□ 0.92
LMNA-207ENST00000368301 USP17L4A6NCW7 530 aa20.78■□□□□ 0.92
LMNA-207ENST00000368301 PLCD1P51178 756 aa20.78■□□□□ 0.92
LMNA-207ENST00000368301 USP17L1Q7RTZ2 530 aa20.78■□□□□ 0.92
LMNA-207ENST00000368301 MAPKAPK5Q8IW41 473 aa20.78■□□□□ 0.92
LMNA-207ENST00000368301 CERKQ8TCT0 537 aa20.78■□□□□ 0.92
LMNA-207ENST00000368301 CD209Q9NNX6 404 aa20.78■□□□□ 0.92
LMNA-207ENST00000368301 TRIM75PA6NK02 468 aa20.78■□□□□ 0.92
LMNA-207ENST00000368301 FAM13BQ9NYF5 915 aa20.78■□□□□ 0.92
LMNA-207ENST00000368301 ZBTB22O15209 634 aa20.77■□□□□ 0.92
LMNA-207ENST00000368301 RBM10P98175 930 aaKnown RBP20.77■□□□□ 0.92
LMNA-207ENST00000368301 RTFDC1Q9BY42 306 aaPredicted RBP20.77■□□□□ 0.92
LMNA-207ENST00000368301 A0A087X0B3 334 aa20.77■□□□□ 0.91
LMNA-207ENST00000368301 STAG2Q8N3U4 1231 aa20.77■□□□□ 0.91
LMNA-207ENST00000368301 TSC1Q92574 1164 aa20.77■□□□□ 0.91
LMNA-207ENST00000368301 TRIM37O94972 964 aa20.76■□□□□ 0.91
LMNA-207ENST00000368301 ST5P78524 1137 aa20.76■□□□□ 0.91
LMNA-207ENST00000368301 ZNF174Q15697 407 aa20.76■□□□□ 0.91
LMNA-207ENST00000368301 EPSTI1Q96J88 318 aa20.76■□□□□ 0.91
LMNA-207ENST00000368301 POLLQ9UGP5 575 aa20.76■□□□□ 0.91
LMNA-207ENST00000368301 ACTN4O43707 911 aaKnown RBP20.76■□□□□ 0.91
LMNA-207ENST00000368301 POSTNQ15063 836 aa20.76■□□□□ 0.91
LMNA-207ENST00000368301 ZNF827Q17R98 1081 aa20.76■□□□□ 0.91
LMNA-207ENST00000368301 C15orf52Q6ZUT6 534 aaKnown RBP20.76■□□□□ 0.91
LMNA-207ENST00000368301 ZNF579Q8NAF0 562 aaKnown RBP20.76■□□□□ 0.91
LMNA-207ENST00000368301 MAN1B1Q9UKM7 699 aa20.76■□□□□ 0.91
LMNA-207ENST00000368301 CEP131Q9UPN4 1083 aa20.76■□□□□ 0.91
LMNA-207ENST00000368301 SMTNL1A8MU46 457 aa20.75■□□□□ 0.91
LMNA-207ENST00000368301 IKBKBO14920 756 aa20.75■□□□□ 0.91
LMNA-207ENST00000368301 SCG2P13521 617 aa20.75■□□□□ 0.91
LMNA-207ENST00000368301 PPP4CP60510 307 aa20.75■□□□□ 0.91
LMNA-207ENST00000368301 CCZ1BP86790 482 aa20.75■□□□□ 0.91
LMNA-207ENST00000368301 CCZ1P86791 482 aaPredicted RBP20.75■□□□□ 0.91
LMNA-207ENST00000368301 MYRIPQ8NFW9 859 aa20.75■□□□□ 0.91
LMNA-207ENST00000368301 KAT14Q9H8E8 782 aa20.75■□□□□ 0.91
LMNA-207ENST00000368301 GGA1Q9UJY5 639 aa20.75■□□□□ 0.91
LMNA-207ENST00000368301 MTMR7Q9Y216 660 aa20.75■□□□□ 0.91
LMNA-207ENST00000368301 BTDP43251 543 aa20.75■□□□□ 0.91
LMNA-207ENST00000368301 GSTO1P78417 241 aa20.75■□□□□ 0.91
LMNA-207ENST00000368301 TMED8Q6PL24 325 aaPredicted RBP20.75■□□□□ 0.91
LMNA-207ENST00000368301 DPF2Q92785 391 aa20.75■□□□□ 0.91
LMNA-207ENST00000368301 C16orf45Q96MC5 204 aaPredicted RBP20.75■□□□□ 0.91
LMNA-207ENST00000368301 QTRT2Q9H974 415 aaKnown RBP20.75■□□□□ 0.91
LMNA-207ENST00000368301 MKNK2Q9HBH9 465 aa20.75■□□□□ 0.91
LMNA-207ENST00000368301 NAV1Q8NEY1 1877 aa20.74■□□□□ 0.91
LMNA-207ENST00000368301 USP27XA6NNY8 438 aa20.74■□□□□ 0.91
LMNA-207ENST00000368301 BAG3O95817 575 aa20.74■□□□□ 0.91
LMNA-207ENST00000368301 FANCCQ00597 558 aa20.74■□□□□ 0.91
LMNA-207ENST00000368301 SLC35G1Q2M3R5 365 aa20.74■□□□□ 0.91
LMNA-207ENST00000368301 RASGRP2Q7LDG7 609 aa20.74■□□□□ 0.91
LMNA-207ENST00000368301 TMC6Q7Z403 805 aa20.74■□□□□ 0.91
LMNA-207ENST00000368301 PNMA1Q8ND90 353 aa20.74■□□□□ 0.91
LMNA-207ENST00000368301 RBM17Q96I25 401 aaKnown RBP20.74■□□□□ 0.91
LMNA-207ENST00000368301 PTPN21Q16825 1174 aa20.73■□□□□ 0.91
LMNA-207ENST00000368301 PFKFB3Q16875 520 aaPredicted RBP20.73■□□□□ 0.91
LMNA-207ENST00000368301 GPKOWQ92917 476 aaPredicted RBP eCLIP20.73■□□□□ 0.911e-9■■■■□ 23.2
LMNA-207ENST00000368301 ROBO3Q96MS0 1386 aa20.73■□□□□ 0.91
LMNA-207ENST00000368301 SKILP12757 684 aa20.73■□□□□ 0.91
LMNA-207ENST00000368301 ATP2B4P23634 1241 aa20.73■□□□□ 0.91
LMNA-207ENST00000368301 NLRP5P59047 1200 aa20.73■□□□□ 0.91
LMNA-207ENST00000368301 MYL5Q02045 173 aa20.73■□□□□ 0.91
LMNA-207ENST00000368301 PRIMPOLQ96LW4 560 aa20.73■□□□□ 0.91
LMNA-207ENST00000368301 POLRMTO00411 1230 aaKnown RBP20.72■□□□□ 0.91
LMNA-207ENST00000368301 IL1R1P14778 569 aa20.72■□□□□ 0.91
LMNA-207ENST00000368301 TTC38Q5R3I4 469 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms